EWM23143.1, cds7519 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|585104024|gb|EWM23143.1| (Proteasome, beta-type subunit, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MTFCTHSPLEHLPACASSEVVHLNTFVPSPSNPSNRPASDVCSSGTTKKENSYSFAENLTREIHGNNDPIIPWQLQSILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
MTFCTHSPLEHLPACASSEVVHLNTFVPSPSNPSNRPASDVCSSGTTKKENSYSFAENLTREIHGNNDPIIPWQLQSILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD
Sbjct: 1 MTFCTHSPLEHLPACASSEVVHLNTFVPSPSNPSNRPASDVCSSGTTKKENSYSFAENLTREIHGNNDPIIPWQLQSILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|298711226|emb|CBJ32446.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 317.39 bits (812), Expect = 9.115e-107 Identity = 145/204 (71.08%), Postives = 173/204 (84.80%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SILEYNG A++AM GKNCV I SD R G QAQTVA +F K+ KM D+L VGL GLATD+ T+++LL FRLNLY+LREER+IKPETFSAL+SHILY+KRFGPYFVEP+VAGL+ EDNTPFIS DLIGAPV DFVV GTC NLYG+CESF++PD++ ++LFE ++Q LL SVDRDALSGWG VVH+ITP+G+ S+TLK RQD
Sbjct: 2 SILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLK-EDNTPFISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALSGWGGVVHIITPEGIMSKTLKGRQD 204
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|156389516|ref|XP_001635037.1| (predicted protein [Nematostella vectensis] >gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 302.753 bits (774), Expect = 5.290e-101 Identity = 136/204 (66.67%), Postives = 173/204 (84.80%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SI+EYNG A++AMVGKNCVAIA+D R G+QAQTV+C+F K+ +M ++LFVGL GLATD+QT+ L+FRLNLY+LRE R IKP+TF +++S++LYE+RFGPYFVEP++AGL + N PFIS MDLIG P+ KDFVV+GTC+ +YG+CES + PDLEP+ LFE +SQ+LL +VDRDA+SGWGAVVHVI PD VT+RTLKAR D
Sbjct: 2 SIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPFISSMDLIGCPMETKDFVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQALLNAVDRDAVSGWGAVVHVIEPDKVTTRTLKARMD 205
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|397628563|gb|EJK68962.1| (hypothetical protein THAOC_09830 [Thalassiosira oceanica]) HSP 1 Score: 302.368 bits (773), Expect = 6.021e-101 Identity = 138/204 (67.65%), Postives = 170/204 (83.33%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SILEYNG A++AM GK+CVAIASD R G+ QTVA +F KV KM+DRL VGL+GLATD+QTL+QLLRFR+NLY+LREER++ PE F+ L+S++LYEKRFGPYF EP++AGL + PF+ MDLIGA AKDF VAGTC N+YG+CE+ +KPD+E E+LFE L+Q+LLASVDRDALSGWG VVH+IT +G+TSR LK RQD
Sbjct: 2 SILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDVQTLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPK-GKPFLGTMDLIGAQAMAKDFCVAGTCDGNMYGMCETLWKPDMEKEELFETLAQALLASVDRDALSGWGGVVHIITKEGITSRELKGRQD 204
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|290993280|ref|XP_002679261.1| (predicted protein [Naegleria gruberi] >gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 301.982 bits (772), Expect = 1.020e-100 Identity = 131/204 (64.22%), Postives = 169/204 (82.84%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SILEYNG +VAM GKNCVAIA+D RYG++ QTV + K+ K+ D+LF+GL+GLATD+QT+ + L+FR+N+Y L+EERDIKP +F+ L+S+ILYEKRFGP+F+EP++AGL +N PFI DLIGAP F +FVV+GTC+ LYG+CES +KPD+EPE LFEV+SQ LLA+VDRD +SGWGAVVHVITPD +T++ LK RQD
Sbjct: 2 SILEYNGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDVQTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPFICAQDLIGAPCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQCLLAAVDRDCISGWGAVVHVITPDSITTKRLKVRQD 205
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|1191055825|ref|XP_020905965.1| (proteasome subunit beta type-3-like [Exaiptasia pallida] >gi|999986576|gb|KXJ25711.1| Proteasome subunit beta type-3 [Exaiptasia pallida]) HSP 1 Score: 301.597 bits (771), Expect = 1.579e-100 Identity = 133/204 (65.20%), Postives = 174/204 (85.29%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SI+EYNG A++AMVGKNCVAIA+D R G+QAQTV+C+F K+ +M ++LFVGL GLATD+QT+ L+FRLNLY+LRE R IKP+TF +++S++LYE+RFGPYFVEP+VAGL + N P+IS +DLIG P+ KDFVV+GTC+ +YG+CES ++PDLEP+ LFE +SQ+L+ +VDRDA+SGWGAVVH+I PD VT+RTLKAR D
Sbjct: 2 SIMEYNGAAIIAMVGKNCVAIAADRRLGMQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTVANRLKFRLNLYELRENRSIKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTNEPYISALDLIGCPMETKDFVVSGTCSEQMYGMCESLWEPDLEPDDLFETISQALMNAVDRDAVSGWGAVVHIIEPDKVTTRTLKARMD 205
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|47028283|gb|AAT09074.1| (proteasome beta subunit [Bigelowiella natans]) HSP 1 Score: 300.827 bits (769), Expect = 2.724e-100 Identity = 135/204 (66.18%), Postives = 175/204 (85.78%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SIL+YNG A+VAMVGK+CVAIASD+RYG+Q QT+AC+ KV +M D+LF+GLSGL TD+QTL+Q F+L +Y LRE R ++P+ FS+L+S LYEKRFGPYFVEP+VAGL A++ PFI+ MDLIGAPVFAKDFVV+GT + LYG+CE+F+KP++ P++LFE +SQSLLA+VDRD L+GWGA+VHVIT DGVT++ LK+R+D
Sbjct: 2 SILQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDVQTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEG-PFIAAMDLIGAPVFAKDFVVSGTTSDELYGVCEAFWKPNMGPDELFETISQSLLAAVDRDCLAGWGAIVHVITKDGVTTKQLKSRKD 204
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|1072224188|gb|OEU08940.1| (N-terminal nucleophile aminohydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 299.671 bits (766), Expect = 7.221e-100 Identity = 135/204 (66.18%), Postives = 162/204 (79.41%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SILEYNG A++AM GK CV IA+D R G Q T+AC+F KV +MS +L+VGL GLATD+QTL QLL FRL LY+L+EER+I P+ FS LL +LYEKRFGPYF+EP+VAGL + PF+SGMDLIGAPV KDFVV GTC N+YG+CE+ FKPD+ PE+LFE L Q+LL+SVDRDALSGWG VVH+IT D V +R LK R D
Sbjct: 2 SILEYNGAAIIAMAGKGCVGIAADRRLGAQLATIACDFTKVFRMSPKLYVGLGGLATDVQTLHQLLEFRLGLYRLKEEREITPKVFSHLLGQLLYEKRFGPYFIEPVVAGLDEKTGEPFLSGMDLIGAPVDTKDFVVTGTCTGNMYGMCEALFKPDMNPEELFETLGQALLSSVDRDALSGWGGVVHIITKDAVITRELKGRMD 205
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|224014869|ref|XP_002297096.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 295.819 bits (756), Expect = 2.720e-98 Identity = 132/204 (64.71%), Postives = 172/204 (84.31%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SILEYNG A++AM GK+CV IASD R G+ QTV+ +F K+ +M+++LFVGL+GLA+D+QTL+QLLRFR+NLY+LREER++ P+ F+ LLS++LYEKRFGPYF EP+VAGL E++ P+++ MDLIGA +DFVVAGTCA NLYG+CE+ +K D+E E+LFE L+Q+LLASVDRDALSGWG VVH+IT +G+ SR LK RQD
Sbjct: 2 SILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDVQTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLD-ENDKPYLATMDLIGATSSTEDFVVAGTCAGNLYGMCETLYKKDMEQEELFETLAQALLASVDRDALSGWGGVVHIITKEGIISRELKGRQD 204
BLAST of EWM23143.1 vs. NCBI_GenBank
Match: gi|301110580|ref|XP_002904370.1| (proteasome subunit beta type-3, putative [Phytophthora infestans T30-4] >gi|675200249|ref|XP_008909009.1| hypothetical protein PPTG_14216 [Phytophthora parasitica INRA-310] >gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans T30-4] >gi|566019262|gb|ETI42173.1| hypothetical protein F443_12663 [Phytophthora parasitica P1569] >gi|567956579|gb|ETK82199.1| hypothetical protein L915_12386 [Phytophthora parasitica] >gi|568014643|gb|ETL88820.1| hypothetical protein L917_12140 [Phytophthora parasitica] >gi|568044907|gb|ETM42081.1| hypothetical protein L914_12222 [Phytophthora parasitica] >gi|568090658|gb|ETN05487.1| hypothetical protein PPTG_14216 [Phytophthora parasitica INRA-310] >gi|570322844|gb|ETO70792.1| hypothetical protein F444_12772 [Phytophthora parasitica P1976] >gi|570946656|gb|ETP11913.1| hypothetical protein F441_12625 [Phytophthora parasitica CJ01A1] >gi|570978942|gb|ETP40027.1| hypothetical protein F442_12574 [Phytophthora parasitica P10297]) HSP 1 Score: 291.582 bits (745), Expect = 1.182e-96 Identity = 129/204 (63.24%), Postives = 169/204 (82.84%), Query Frame = 0
Query: 77 SILEYNGGAVVAMVGKNCVAIASDLRYGVQAQTVACNFPKVHKMSDRLFVGLSGLATDIQTLEQLLRFRLNLYKLREERDIKPETFSALLSHILYEKRFGPYFVEPLVAGLRAEDNTPFISGMDLIGAPVFAKDFVVAGTCAANLYGLCESFFKPDLEPEQLFEVLSQSLLASVDRDALSGWGAVVHVITPDGVTSRTLKARQD 280
SIL YNG A++AM GK+CV IA D R G+QAQTVA +F KV +++D+ F+GL+GLATD+Q++ QLL+F++N+YK+ EERDIKP+T SALLS+++YEKRFGP+FVEP++AGL EDN PF+S MD +G + KDFVVAGT LYG+CES +KPD+E E LFE LSQ LL++ +RDALSGWGAVVH+ITP G+TS+ L++RQD
Sbjct: 2 SILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDVQSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGL-TEDNKPFLSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDALSGWGAVVHIITPKGITSKKLQSRQD 204 The following BLAST results are available for this feature:
BLAST of EWM23143.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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