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Properties
| Property Name | Value |
|---|
| Product | Complex 1 LYR protein |
| Orig transcript id | gnl|cribi|Naga_100043g18.7250.mrna |
| Orig protein id | gnl|cribi|Naga_100043g18.7250 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:172571..173784 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7531 ID=rna7531|Name=rna7531|organism=Nannochloropsis gaditana|type=mRNA|length=297bp
ATGGAGCAAGCATCGTCTAGTCTGGGTTATTTGAGGATGATAACCCCGAA
ACGGTGGAAATCCTTACATACGGGAGACTCAGATGCGATGGGAGGAGCGA
AATCGGCTGGGCGGACTTACATCGTGTACAAAGACGGTGGAGGTAGTGTA
TCTAGGGAGCCGCTGCCACGCGAGAAGTCCGCTTACAGCAACTGGGACGG
GAGCAGCATGGACCCTGATGCCGTGCGCCGCCACCAGCATCAACTACGAC
GGATGGGTTTTAGAGATAACACTCACGCTAAGGGTGGCATTTTTTGA back to topprotein sequence of rna7531 >rna7531-protein ID=rna7531-protein|Name=rna7531|organism=Nannochloropsis gaditana|type=polypeptide|length=199bp
MPLQSVNYGRPPLPKYDDGSGEPRFARFGLTQRSLRLWAFLCGHFLTMAS
SARGAKHQHVLQMYRRLLGLARRLPESKQDEALFQIRQGFREHAEEADEA
SLGRDRLGRARGQPTSLTLSSPEVPILILIDVPTTHQWEEFEDWTRISFG
ASHASTMIIRIPSCQYEVAPFLNYGTTECLGCYEGTLIVRILAMLMKSY back to topmRNA from alignment at CM002472.1:172571..173784- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7531 ID=rna7531|Name=rna7531|organism=Nannochloropsis gaditana|type=mRNA|length=1214bp|location=Sequence derived from alignment at CM002472.1:172571..173784- (Nannochloropsis gaditana)
ATGCCACTGCAAAGTGTAAACTACGGTCGACCGCCACTCCCTAAATACGA
CGACGGATCAGGGTGAGCAACGCAAAAAGAGCTTGGAGAGGATGGTGAGA
GAGCGCGACGGGAGCGAGGGAGACTAGGCGAGGAGCGAAGCAAGCGATCA
AGCGTTGCATCACTTCCTTTCCCAACGGAGAACGAAAGCCATCAAGACAT
GGAAAACGGTCATCCATCGAAGAAAGGCCTGCACGCGATTAATTGCAACC
TGCGATATGTTTGAGATTTACCCTGTGCGTGACGGTCGAATGGTGGGCGC
CAGGACGCGAAATAGACATTTTTAAACCTTTTGGATCACGATCGCTTTTT
GATCTGTTTTGTTTGAGTAGGCAGCCTCATACTGCATGGTTTCACATGGA
CGATCCACAAACAATTTTTGTGTGTTCATCTGAACAGAGAGCCTCGTTTC
GCACGCTTTGGCCTTACACAACGAAGCCTTCGTCTTTGGGCCTTCTTGTG
TGGCCATTTCCTTACCATGGCTTCTTCAGCAAGGGGAGCCAAGCACCAAC
ACGTCTTGCAGATGTATCGTCGGTTGCTTGGCCTAGCCAGAAGGTTGCCG
GAGAGCAAGCAGGATGAAGCCCTGTTTCAAATACGTCAAGGGTTTCGGGA
ACACGCGGAGGAGGCCGACGAAGCGAGGTAGGTAGTGAGCGTGCTATCCC
ACTCTTTTTATATCTTGGTCAATCATCTATCAGGTGGCCGGGGACAAGTC
TTCTCGCCTTGCTACCATTGTGAATCGTCAAATATGTCTGTACGCCATAC
GTGTCATTCATTGTTGATGCTTTAAAGTGTGCCTGAAGCTTGGGAAGAGA
CAGGCTGGGACGCGCTAGGGGACAACCCACGTCGCTCACCCTTTCATCCC
CCGAGGTTCCAATTTTGATACTGATCGATGTGCCTACGACACACCAGTGG
GAGGAGTTTGAAGACTGGACAAGAATATCATTCGGGGCAAGTCACGCATC
AACCATGATCATTCGAATGTGCCTAGCCTTTTTGTTCCCTAGAATCACAT
TTATGCGTCCAGGCCATTCTTAGAGCGACTGTTTGCTAGTATGAAGCCCG
TCTTGCCAATACGAAGTCGCCCCCTTTCTCAACTATGGCACGACCGAATG
TTTAGGATGTTATGAAGGCACACTGATTGTTCGCATTTTGGCCATGCTCA
TGAAGTCTTACTAA back to topCoding sequence (CDS) from alignment at CM002472.1:172571..173784- >rna7531 ID=rna7531|Name=rna7531|organism=Nannochloropsis gaditana|type=CDS|length=2400bp|location=Sequence derived from alignment at CM002472.1:172571..173784- (Nannochloropsis gaditana)
CCCGTCTTGCCAATACGAAGTCGCCCCCTTTCTCAACTATGGCACGACCG
AATGTTTAGGATGTTATGAAGGCACACTGATTGTTCGCATTTTGGCCATG
CTCATGAAGTCTTACTAACTTGGGAAGAGACAGGCTGGGACGCGCTAGGG
GACAACCCACGTCGCTCACCCTTTCATCCCCCGAGGTTCCAATTTTGATA
CTGATCGATGTGCCTACGACACACCAGTGGGAGGAGTTTGAAGACTGGAC
AAGAATATCATTCGGGGCAAGTCACGCATCAACCATGATCATTCGAATAG
AGCCTCGTTTCGCACGCTTTGGCCTTACACAACGAAGCCTTCGTCTTTGG
GCCTTCTTGTGTGGCCATTTCCTTACCATGGCTTCTTCAGCAAGGGGAGC
CAAGCACCAACACGTCTTGCAGATGTATCGTCGGTTGCTTGGCCTAGCCA
GAAGGTTGCCGGAGAGCAAGCAGGATGAAGCCCTGTTTCAAATACGTCAA
GGGTTTCGGGAACACGCGGAGGAGGCCGACGAAGCGAGATGCCACTGCAA
AGTGTAAACTACGGTCGACCGCCACTCCCTAAATACGACGACGGATCAGG
CCCGTCTTGCCAATACGAAGTCGCCCCCTTTCTCAACTATGGCACGACCG
AATGTTTAGGATGTTATGAAGGCACACTGATTGTTCGCATTTTGGCCATG
CTCATGAAGTCTTACTAACTTGGGAAGAGACAGGCTGGGACGCGCTAGGG
GACAACCCACGTCGCTCACCCTTTCATCCCCCGAGGTTCCAATTTTGATA
CTGATCGATGTGCCTACGACACACCAGTGGGAGGAGTTTGAAGACTGGAC
AAGAATATCATTCGGGGCAAGTCACGCATCAACCATGATCATTCGAATAG
AGCCTCGTTTCGCACGCTTTGGCCTTACACAACGAAGCCTTCGTCTTTGG
GCCTTCTTGTGTGGCCATTTCCTTACCATGGCTTCTTCAGCAAGGGGAGC
CAAGCACCAACACGTCTTGCAGATGTATCGTCGGTTGCTTGGCCTAGCCA
GAAGGTTGCCGGAGAGCAAGCAGGATGAAGCCCTGTTTCAAATACGTCAA
GGGTTTCGGGAACACGCGGAGGAGGCCGACGAAGCGAGATGCCACTGCAA
AGTGTAAACTACGGTCGACCGCCACTCCCTAAATACGACGACGGATCAGG
CCCGTCTTGCCAATACGAAGTCGCCCCCTTTCTCAACTATGGCACGACCG
AATGTTTAGGATGTTATGAAGGCACACTGATTGTTCGCATTTTGGCCATG
CTCATGAAGTCTTACTAACTTGGGAAGAGACAGGCTGGGACGCGCTAGGG
GACAACCCACGTCGCTCACCCTTTCATCCCCCGAGGTTCCAATTTTGATA
CTGATCGATGTGCCTACGACACACCAGTGGGAGGAGTTTGAAGACTGGAC
AAGAATATCATTCGGGGCAAGTCACGCATCAACCATGATCATTCGAATAG
AGCCTCGTTTCGCACGCTTTGGCCTTACACAACGAAGCCTTCGTCTTTGG
GCCTTCTTGTGTGGCCATTTCCTTACCATGGCTTCTTCAGCAAGGGGAGC
CAAGCACCAACACGTCTTGCAGATGTATCGTCGGTTGCTTGGCCTAGCCA
GAAGGTTGCCGGAGAGCAAGCAGGATGAAGCCCTGTTTCAAATACGTCAA
GGGTTTCGGGAACACGCGGAGGAGGCCGACGAAGCGAGATGCCACTGCAA
AGTGTAAACTACGGTCGACCGCCACTCCCTAAATACGACGACGGATCAGG
CCCGTCTTGCCAATACGAAGTCGCCCCCTTTCTCAACTATGGCACGACCG
AATGTTTAGGATGTTATGAAGGCACACTGATTGTTCGCATTTTGGCCATG
CTCATGAAGTCTTACTAACTTGGGAAGAGACAGGCTGGGACGCGCTAGGG
GACAACCCACGTCGCTCACCCTTTCATCCCCCGAGGTTCCAATTTTGATA
CTGATCGATGTGCCTACGACACACCAGTGGGAGGAGTTTGAAGACTGGAC
AAGAATATCATTCGGGGCAAGTCACGCATCAACCATGATCATTCGAATAG
AGCCTCGTTTCGCACGCTTTGGCCTTACACAACGAAGCCTTCGTCTTTGG
GCCTTCTTGTGTGGCCATTTCCTTACCATGGCTTCTTCAGCAAGGGGAGC
CAAGCACCAACACGTCTTGCAGATGTATCGTCGGTTGCTTGGCCTAGCCA
GAAGGTTGCCGGAGAGCAAGCAGGATGAAGCCCTGTTTCAAATACGTCAA
GGGTTTCGGGAACACGCGGAGGAGGCCGACGAAGCGAGATGCCACTGCAA
AGTGTAAACTACGGTCGACCGCCACTCCCTAAATACGACGACGGATCAGG back to top
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