rna7530, rna7530 (mRNA) Nannochloropsis gaditana

Overview
Namerna7530
Unique Namerna7530
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2338
Alignment locationCM002472.1:172243..172539 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100043g17.7248.mrna
Orig protein idgnl|cribi|Naga_100043g17.7248
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:172243..172539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100043g17gene7289Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23165.1cds7512Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7530rna7530-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7530 ID=rna7530|Name=rna7530|organism=Nannochloropsis gaditana|type=mRNA|length=2338bp
TCGGCCGCTCGCCTCCCTGCCCTGTCCGGCCTTGTCACATTACAGGGATG
AAGGACAAGTGTCAGTGCACTTCTGGCAAAAGCGCCTTCCACATTAAAGC
TGTTTAGAACGCACTTTCTGGTATGACATTAAACGATGTACGCAAACACT
GAGTGAACGTCTTGCATTGCTGACTTCAACTTCGTGCCATGCCCTCTTCC
TCGTGTCCTGGAACTCGCTTCACCCTGTCACTGGAATTAACTCCACTCCC
CATATAACAGACCACAGCCTAAAAGTTTGACACATTTTGCGCAGTATTTT
ACCCCGTCCCATGAAAGAATACGGCCGAGGAGGGCTGATTGCCCTATTAG
TCCTCTTGGCTGTCGTCTTTGAGGCGCAAGGTGATGTAAAACGCATCAAA
CTAGCTCCTGGTCCGTCCGGCATGGAAACCTCCCAAATTGGGTTGGGGGG
ACTTCATTTTGCTGAGCTGCAAGCAAGTGGAGGCGCAACAGCGCTCAGAG
ACCTCCTTCTTGTTGCGCTTCAAAACAATATCACGCTGCTGGACTTGGCT
GACATCTATGCTTATAACACTAGCGCTGAGCTTGTAGGGCAGGCGTTCGC
GTTACAACCAGGACTACGAGAAAGGTTCCAGATTGTGTACAAGACAGGCA
TTGTATTCCCGGACGCTCCTGTACAATATCTCGACAGTAGTGGTCAGTAC
GTGGCAAATGCTGTCGACATCGCTCTAGCTCAGTTGGGCACCACGTACAT
AGATGTTCTTATGCCTCATGCACCTGATCCACTACTTGATGCAACGGAAC
TAGTTACCACATTTAAAAAGTTGAAGAGTGAGGGTAAAGTCCGCTATTTC
GGTGTGGCCAACTATCCTCCAAGCAAGCTTTCTCTCCTCCAAGCTGCTAT
GGAAAAGCAGCAATTGAGTCTGACAACCTCCGAGCTGGAATGCTCTGTCC
TCACTCCTACGGCTCTTTTCGACGGCCGCCTGGATGAGCTTCAAGAATTG
GGGATTGCACCGCTCGCGTGGGGTCCTCTAGGAGGAGACCCTCTTGCCGG
TGTCAACCGGTTATTCAACTTCCCGAATGGTGCGCGGCAGGGGCGAATTC
TAGCTGCTCTTCAAGAAGTGGCAACGGAAATGGGACCTGATGTGACGACT
GACCAAGTAGCCGTTGCATGGCTTCTTCGACACCCCTCGCGAATCGTACC
GCTTTTGGGAACTGTGAATGCGTACAGGCTTAGATGGCAAGCAGCAGCAA
CAAACTTGCATATGACTCGGGCGCAATGGACTCAGATCATGGGTGCTTCT
GCAGTCTCTCAATATCGTCGATGGGAGCAACTAAATGATGGAGAGTGGCA
TGATGTCGCAAACGATTACCAGAAAAATACTTACGGCTCGCCATTGGGGG
TAGACGTTCCAGTAGGTTTCTGTGACTTTACCAGTTGTAAGTTGCCAGTA
GGGTAATCTACCTACCGCACGGCTTCCATGTATTGTATGCTTTTGTACTC
AAGAGGAAGTGTTGAGCACTGCTTAATCAATGAAGCACAAGACAGACACA
GCAAAGCATCTTGGAGGTCAATACTATGCGATGCTTTGCTGGGTAGCTGC
GTCTCATGGTTGTACATCAAATTGGGAAGAACAAATTCCTCATAAGACAA
TGTTTTTTCGTAGGATATCCAACCAGAATTCATATAGGCACGGAACGAAA
AAAAACATACCCAGATGTATATAAGTGAGCATTCAGTATTTTTATTCAGA
TGTCCTAAATTATTAAAACAATGCATTTATCACCTTTTTTTTGGCTTTTA
CTGGTATTTGTTTGAGCAGCGAGCTCGGGACGTGACGCGTGAAATGTTCA
GCGTGAGCAAAAGCTTTGAAAGAGGGCAACAAGCTTAAGCATCACTCTAC
ACACTTTGGGGCCAGATAGACCCTCAATTTCGTAGGTGAGAAATGTACGA
GCTTTCGGGGCTAAAAAACCGAGTCTGCACTCACACTTACGGACGAGCGA
CACTTGTAAATTGGTTTCAAGAGTTGTCAGCTCTTCTCAAATCGCAAATA
TTTGCGCTTAGTTCAAAAGTGTTGTAACATCATCGAAACTTCAGTTTCGT
GTTTACTTAAAGAGTATTAAGTACTACTACTACATACGTTTATCAAATTT
TCTATATGTAGCGAGGCTTGCAGGTAGCAGGAGAAATATTCGTACATTGA
AAAAGGAATCAACGATGAGAGGGAAAATTATTCCTCGCATAATGAGTCCA
TGTGAGATATACCATTTACACATTGTGTAAAACATGACGATTCAAAAGTC
ACATCCCCACAACAACGAGACATTCATTCCATGATTCC
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protein sequence of rna7530

>rna7530-protein ID=rna7530-protein|Name=rna7530|organism=Nannochloropsis gaditana|type=polypeptide|length=98bp
MEQASSSLGYLRMITPKRWKSLHTGDSDAMGGAKSAGRTYIVYKDGGGSV
SREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF
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mRNA from alignment at CM002472.1:172243..172539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7530 ID=rna7530|Name=rna7530|organism=Nannochloropsis gaditana|type=mRNA|length=297bp|location=Sequence derived from alignment at CM002472.1:172243..172539- (Nannochloropsis gaditana)
ATGGAGCAAGCATCGTCTAGTCTGGGTTATTTGAGGATGATAACCCCGAA
ACGGTGGAAATCCTTACATACGGGAGACTCAGATGCGATGGGAGGAGCGA
AATCGGCTGGGCGGACTTACATCGTGTACAAAGACGGTGGAGGTAGTGTA
TCTAGGGAGCCGCTGCCACGCGAGAAGTCCGCTTACAGCAACTGGGACGG
GAGCAGCATGGACCCTGATGCCGTGCGCCGCCACCAGCATCAACTACGAC
GGATGGGTTTTAGAGATAACACTCACGCTAAGGGTGGCATTTTTTGA
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Coding sequence (CDS) from alignment at CM002472.1:172243..172539-

>rna7530 ID=rna7530|Name=rna7530|organism=Nannochloropsis gaditana|type=CDS|length=297bp|location=Sequence derived from alignment at CM002472.1:172243..172539- (Nannochloropsis gaditana)
ATGGAGCAAGCATCGTCTAGTCTGGGTTATTTGAGGATGATAACCCCGAA
ACGGTGGAAATCCTTACATACGGGAGACTCAGATGCGATGGGAGGAGCGA
AATCGGCTGGGCGGACTTACATCGTGTACAAAGACGGTGGAGGTAGTGTA
TCTAGGGAGCCGCTGCCACGCGAGAAGTCCGCTTACAGCAACTGGGACGG
GAGCAGCATGGACCCTGATGCCGTGCGCCGCCACCAGCATCAACTACGAC
GGATGGGTTTTAGAGATAACACTCACGCTAAGGGTGGCATTTTTTGA
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Synonyms
Publications