EWM23165.1, cds7512 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23165.1 vs. NCBI_GenBank
Match: gi|585104046|gb|EWM23165.1| (hypothetical protein Naga_100043g17 [Nannochloropsis gaditana]) HSP 1 Score: 203.371 bits (516), Expect = 1.993e-66 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 Query: 1 MEQASSSLGYLRMITPKRWKSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF 98 MEQASSSLGYLRMITPKRWKSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF Sbjct: 1 MEQASSSLGYLRMITPKRWKSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF 98
BLAST of EWM23165.1 vs. NCBI_GenBank
Match: gi|1072227911|gb|OEU12649.1| (hypothetical protein FRACYDRAFT_270420 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 57.7658 bits (138), Expect = 3.317e-8 Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 0 Query: 61 AYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF 98 SNWDG ++DPD+V++H HQL+RMG+ +N+HAK GIF Sbjct: 142 VISNWDGKNLDPDSVKQHNHQLKRMGYLNNSHAK-GIF 178
BLAST of EWM23165.1 vs. NCBI_GenBank
Match: gi|1210515158|dbj|GAX25870.1| (hypothetical protein FisN_6Hh092 [Fistulifera solaris]) HSP 1 Score: 54.299 bits (129), Expect = 3.359e-7 Identity = 35/106 (33.02%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 1 MEQASSSLGYLRMITPK---------RW--KSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKG 95 +++A S L +LRM + K RW ++ ++DA G ++D G V R NWDG ++DP++V+ H+ QLRR GF +N HAKG Sbjct: 50 LKEAESRLSFLRMKSTKSQQRGTLAGRWVYRNGERLEADAEG----------TFRDSKGKVVR-----------NWDGKNLDPESVKMHRQQLRRAGFVNNAHAKG 134
BLAST of EWM23165.1 vs. NCBI_GenBank
Match: gi|1210519791|dbj|GAX21343.1| (hypothetical protein FisN_6Lh092 [Fistulifera solaris]) HSP 1 Score: 54.299 bits (129), Expect = 4.247e-7 Identity = 35/106 (33.02%), Postives = 52/106 (49.06%), Query Frame = 0 Query: 1 MEQASSSLGYLRMITPK---------RW--KSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKG 95 + +A S L +LRM + K RW ++ ++DA G ++D G V SNWDG ++DP++V+ H+ QLRR GF +N HAKG Sbjct: 50 LREAESRLSFLRMKSTKSQQRGTLAGRWVYRNGERLEADAEG----------TFRDSKGKV-----------VSNWDGKNLDPESVKMHRQQLRRAGFVNNAHAKG 134
BLAST of EWM23165.1 vs. NCBI_GenBank
Match: gi|290985026|ref|XP_002675227.1| (predicted protein [Naegleria gruberi] >gi|284088822|gb|EFC42483.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 54.299 bits (129), Expect = 4.335e-7 Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 0 Query: 1 MEQASSSLGYLRMITPKRWKSLHTGDSDAMGGAKSAGRTYIV-----YKDGGGSVSREPLPRE-KSAYSNWDGSSMDPDAVRRHQHQLRRMGFRD 89 +++A GYL MITPKR LHT S + G+T +V +KD + L +E K+ +SNW ++DPD VR+H+ L+R F D Sbjct: 41 LKKAHDKFGYLCMITPKR---LHTETS------QIDGKTQLVKIDGEWKDVNAIGEDDNLTKEEKATWSNWGRGNLDPDQVRKHEQLLKRQHFMD 126 The following BLAST results are available for this feature:
BLAST of EWM23165.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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