rna7508, rna7508 (mRNA) Nannochloropsis gaditana

Overview
Namerna7508
Unique Namerna7508
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2373
Alignment locationCM002472.1:126211..126605 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101845g1.4212.mrna
Orig protein idgnl|cribi|Naga_101845g1.4212
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:126211..126605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101845g1gene7268Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7508rna7508-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23183.1cds7490Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7508 ID=rna7508|Name=rna7508|organism=Nannochloropsis gaditana|type=mRNA|length=2373bp
ATGAAGGCCGAGAGCTCGGGCCCTGCTCACGGGGAAAGGGAGGGGCGGGG
CGGGCTGCGGGAGTTTTCGGAGAGTACCTTCCTACTGGTGCTCTCCCTGT
GCAAGGCGGCGGAGGAAGGGGCAGGGCGGGAGGGAGGGCAGGGCCGCTGG
GAGGGAGGGACCGAGGGCGGGAGGGAGGGAGGGAGGGAGGGCGGGGCCCT
GGAGGCGGCCTTGCTGGTGTTGGCCGGGATGGTGGAGCGCGGGCACGGGA
ACGTGCTGGCGTTCAATATGGTCCTGAAGATGTGCGAGCGACGGGGAGAC
GCCCGGCGAGCCCTGCTACTCCTGGCAGAAATGCGCTCCCTGCCCGCCCT
CCTTCCCGACCTCATCACTTACAACACCCTCATCTCCGCCTGCGCCAAGG
GCCACCGGCCCCGGGACGCGCAGCGCCTGGTCAAGGAGCTGGAAGGGGAG
GGCGGGCGGATCCTTCCCTCCCTGGTAACGTACAACTCCCTCTTGGCCGC
CCTCGCTCAGGCGGGGCAGTGGAAAGAGGCCATGCGGGTTCTGCAGACTC
TGCAGCGGAAGAACCTCCGGCCTGATGTCATCACTTACACCAGCCTCATC
CAGGCTTGCTCCAAGGCCCGACCGTCCCAGGTGAAGAAGGCGCTTTACTA
CCTGGAGCTGATGAAGGAAGCGAGGGAGGGCGGGGGAGAGGTCACGCCGG
ACGCGGTCGCCTACGCGGCGGCCATCGAGGCCTGCGCACGGGGGGGGCCC
AACGCGGGCTGGGGGGAGACGGCCTTGCGGCTCTTCGAGGAGATGCAGGA
GCGAGGGATGGAGGCGCCGGCGCAGGTCTACCGGGCCTTAGTCCAGGCGT
GTGGGAACGACGTCGTCCCCGAGGGCAGGGCGCCAACGCCTTCGGGGCCT
TCGGGGGCCTCGGACACGTCGGCGGCAATGCGAGCGTCCACCCCCCCGGC
CCCGCGACGGCCCATGACCACGGCCCGGGTCTGGTCCCTCCTCCAAGCCT
GCCCGCCCGCGCACCGGAACAACTTCGTCTACACGGCGGCCGCCAAGGCC
TGCGAGCGGGGCCGGGACTGGGGCATGGCCCTCCGGCTCGTGGAGGACAT
GCGCCGGCTCGGTATCGAACCCGACGACATTACGCACGGGCAGCTTTTGC
ACGTCCTCGCCTCCATGGGCCGGTGGGAGGAGGCCTTGGGAGTGCTCGCC
TCCATCCGGCGCCGGAACGTCCGGCACTACACCTCCGCAATCCGGGCCTG
CGGGTTGGCCGGGGGGGCAGCCGCGCGGGAGGGGATGCCTCTGTACGTGA
GGATGAGGGAAGAGGGCCTCGTGCCCGACCTGTACGTCTACAATGTGGTT
CTCCAGGCGTTGCGGGCCGCGGATTGTGACTTGCCCGGGAACGGGCAGCC
TCTTTCCTCCCCGTCCTCACCCCCTTCCTCCCCCTCTTCCTCGACTTCGG
TCGCCGACGACGCCCTGGCCCTCTACGAGGAGATGTGCGGCAATTCCCCC
GCTAAGTACGCCGCGGGGACCCTGTCTTTTGGGAAAAATAACAGACGCGG
GCAGCAGCTCCCACGCTCTCTCCCGCCCCCGCCCCCCGTGACCCCAGACA
TCGTCAGCTTCACCGTCCTCATCTCCATCCTTGAGAGGCACGGGCGACAC
GCGCAGGCACTGCGGGTTTTTCAGGACGGGGTCCGTGCCCAGGTGCTCAT
GACCACGCCCCTCGACACCCTGTGGGAGAAAGACCTGTCCCGACTCTCGT
TCCAACTCGTGCGCGCTGCAGTGGACTTCTCCGTGGGCGAGTTGGTAGCG
GACTTCCGGCATCAGTTGAAGGCGGCAGCGGGGACCAAGGACCCCGACGT
GCAGGACCTGGTCTTGATCACGGGCTCGGACGTCCGGGGAGCGCGAGGAG
CGGGCGGTGGACCCAGGCAAGATGGGATGGGGAAGGAAAGAATGGGAGCG
GCGCACGGACAGGTGCCAGAGACGCGGCAAGCTTTGGCGCGCTTGGTTTT
GTCAGAGAAGGGATTAATACCCGCAGATGAGGAGTCGAGAAAACCAGGTG
TCCTTACAGTGCCAGCCAATGTCATGCGGCAGTGGCTTTGCAAGCAATAG
TCAGGTATATAGATGCGGGCGCATGAACGATGGCAATAAAGTAAAATAAC
CGTGCGGACAAGAGGATCGATATTCACACGTATATGAAAGGCGTTTCCGC
GGTTTTGAATGGCATTAACTGGCATTAAAGGTTTTCTTTATTAAGAATGT
GGTGAAGCGTTGACCAGTGAAAAGTACGTGACGTTTGCAAGTGTCGCATG
TAGACAACATAGCTCCGTTCTCGTCTCGAGGACACGAAGCATTTTCCCGC
ACATCACGCACCATGCCGTAACA
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protein sequence of rna7508

>rna7508-protein ID=rna7508-protein|Name=rna7508|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MGRTRVRLLESYPGDEEGRGLEVRVRDGAARLCLSEGGGEGPGEVVGEGV
LLDPFQTGYLLVPGSGNSPWYLHDVAVEMRGMEGRLLAPGGGREGGRGGG
RGARGAPAVSGLC
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mRNA from alignment at CM002472.1:126211..126605+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7508 ID=rna7508|Name=rna7508|organism=Nannochloropsis gaditana|type=mRNA|length=395bp|location=Sequence derived from alignment at CM002472.1:126211..126605+ (Nannochloropsis gaditana)
atggggaggacgagggtgCGGTTGCTGGAGTCGTACCcgggtgatgagga
gggacggggcttGGAGGTTCGGGTCCGGGACGGGGCGGCGCGCCTGTGTC
tgagcgaaggagggggggagggcccagGGGAAgtcgtgggagagggcgtg
ctGCTCGACCCCTTCCAGACCGGCTACCTCTTGGTGCCGGGCTCGGGGAA
TTCTCCATGGTACCTGCATGAcgtggcggtggagatgagggggatggaag
ggcgGCTCTTggcgccggggggagggcgggaaggagggcgggggggagga
aggggggcccGGGGAGCACCTGCTGTCTCTGGGCTCTGTTGAGTACGCCC
AGTGCAAGGCACGGCCGAAGGAAGGGCTGGACgggtgggaggacg
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Coding sequence (CDS) from alignment at CM002472.1:126211..126605+

>rna7508 ID=rna7508|Name=rna7508|organism=Nannochloropsis gaditana|type=CDS|length=342bp|location=Sequence derived from alignment at CM002472.1:126211..126605+ (Nannochloropsis gaditana)
atggggaggacgagggtgCGGTTGCTGGAGTCGTACCcgggtgatgagga
gggacggggcttGGAGGTTCGGGTCCGGGACGGGGCGGCGCGCCTGTGTC
tgagcgaaggagggggggagggcccagGGGAAgtcgtgggagagggcgtg
ctGCTCGACCCCTTCCAGACCGGCTACCTCTTGGTGCCGGGCTCGGGGAA
TTCTCCATGGTACCTGCATGAcgtggcggtggagatgagggggatggaag
ggcgGCTCTTggcgccggggggagggcgggaaggagggcgggggggagga
aggggggcccGGGGAGCACCTGCTGTCTCTGGGCTCTGTTGA
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Synonyms
Publications