EWM23183.1, cds7490 (CDS) Nannochloropsis gaditana

Overview
NameEWM23183.1
Unique Namecds7490
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:126211..126552 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23183.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101845g1.4212.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:126211..126552 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23183.1 vs. NCBI_GenBank
Match: gi|585104068|gb|EWM23183.1| (hypothetical protein Naga_101845g1 [Nannochloropsis gaditana])

HSP 1 Score: 212.616 bits (540), Expect = 1.278e-69
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MGRTRVRLLESYPGDEEGRGLEVRVRDGAARLCLSEGGGEGPGEVVGEGVLLDPFQTGYLLVPGSGNSPWYLHDVAVEMRGMEGRLLAPGGGREGGRGGGRGARGAPAVSGLC 113
            MGRTRVRLLESYPGDEEGRGLEVRVRDGAARLCLSEGGGEGPGEVVGEGVLLDPFQTGYLLVPGSGNSPWYLHDVAVEMRGMEGRLLAPGGGREGGRGGGRGARGAPAVSGLC
Sbjct:    1 MGRTRVRLLESYPGDEEGRGLEVRVRDGAARLCLSEGGGEGPGEVVGEGVLLDPFQTGYLLVPGSGNSPWYLHDVAVEMRGMEGRLLAPGGGREGGRGGGRGARGAPAVSGLC 113
The following BLAST results are available for this feature:
BLAST of EWM23183.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104068|gb|EWM23183.1|1.278e-69100.00hypothetical protein Naga_101845g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7508rna7508Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications