rna7506, rna7506 (mRNA) Nannochloropsis gaditana

Overview
Namerna7506
Unique Namerna7506
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1544
Alignment locationCM002472.1:115946..117383 -

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Properties
Property NameValue
Productlipolytic protein g-d-s-l family
Orig transcript idgnl|cribi|Naga_100343g2.7639.mrna
Orig protein idgnl|cribi|Naga_100343g2.7639
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:115946..117383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100343g2gene7266Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7506rna7506-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23185.1cds7488Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7506 ID=rna7506|Name=rna7506|organism=Nannochloropsis gaditana|type=mRNA|length=1544bp
ACACTGGGGTACCGCGAGTTTCTGAAGTATAAGCTTGCCCCTCCCAACCA
CACGCAATCCCACAGGCGGTTACGAGGATCCCCCACCGTCGGTGTGAATA
GGGAGATATGACGCCGCAAGCTGAAACGAATGTTTCCACGAACGGGGTAG
CAAACTCTCAGACCCATTCTAGCCCCCCCTCGTCCCCAGGTGTCCAATAT
AAGGCAGCGGGAGGCAAAATGATCAGGGTCGCCCTGGCGGCCCGGGACAA
CGGCGACATGTCGCTCTTTCGGGAGGCGCTGGCCATGCTGACGATGGGCG
TGATGATGAGCTGGTATTACCTGGTGGTGATCCTCTCCCTTCTCTGCGTG
GCGGGCCTCTTTTTTCCGACCTGGCGCGTCGTGGCAGGGACGGCCTTCGT
GCTCATGTGGAGTGCGGCCTTCCTACCCCTGGACTACCAGGGATGGGACG
CGTTTTGCAATTCCTTCCTTTTCAAGCTCTGGCGGGACTACTTCCACTAC
GAATACATTCTGGAGGAAGCAATCGACCCGAAGAAGCGGTATTTGTTCGC
AGAAATGCCCCACGGCATCTTCCCCTGGGGAGAGGTCATTTCCATCTCCA
TCACCAAGCAGCTCTTCCCCGGAAGCCGCGTAGGCAGCATTGGCGCCAGC
GTCATCTTCCTCCTCCCGGGCCTCCGTCACTTCTTCTCTTGGATCGGCTG
TCGGCCCGCGTCCCCCGAGAACATCAAGAAAATATTTGAGGAAGGAGCGG
ACTGCGCGGTCACGGTGGGGGGAGTGGCCGAGATGTTCTTGGTGGGCGGG
GACAAGGAGCGCCTGTATTTGAAGAAACACAAGGGGTTCATTCGGGAGGC
GATCAAAAACGGGGCGGATGTGGTGCCCGTCTTCTGCTACGGAAATTCGA
AGCTCTTCAGCGTGGTCGGGGAGAGCAGCCGCCTCTCCATGGGGCTCCTC
AAGCGGCTCTCCCGACGCATCAAAGCCAGCGTCCTCATCTTCTACGGACG
CCTTTGCCTGCCCATCCCCATCCGGCACCCCTTGCTCTTCGTGGTGGGGA
AACCGCTCCCCGTGGTCCAGAAGGACGCTCCTTCCAAGGAGGAGATCGCC
GCTATGCACGCCCTGTTTTGCGAGAAGGTAGAGGAATTGTACTACAAATT
TAGACCCGAATGGGAGACTCGCCCCCTCTCCATTGAGTGAGCAGGGGCCC
GTCGGGGGGCGTCGGGGGCGAGAGGTTTAGGAAGGGGGGCCTGAGACACT
GGAGATGAGCATCGGAGGGAAGGGATGGACGGTGTAAGCGGGAGGATGAG
AGTGTGTCTGGTGGAGGCAGGATGCTTGGGCAAGAAGTGTAGAGTAATGG
TCGAAGTTGTGGGAGGGCCCAGGGAGGGAGGGAGGGGGCCGCTTGGGGCA
CCCATTTTGGCGGGAAGCATGGGGATGGAGGGACTTGAAAGAAGAAGTAC
GAAAGACTACAAGTGACCGGGGTTTTGGTCAAGGCGAGCACTTTCAGGCA
CCACATTGCCTCGCCCCTCCGTATCCTGATTCCCTATTGGTACG
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protein sequence of rna7506

>rna7506-protein ID=rna7506-protein|Name=rna7506|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
MPCINSGQCNDEAYTFYGMLKSCQGSSISDVIFESVSVGNLISSPPPFQR
LVDIRIIHSASFFMLPFYARLQSHYAHTQSHLFLIMRFSTSIASVLFAAV
PMAMARTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTES
IPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSI
GSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCH
LADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI
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mRNA from alignment at CM002472.1:115946..117383-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7506 ID=rna7506|Name=rna7506|organism=Nannochloropsis gaditana|type=mRNA|length=1438bp|location=Sequence derived from alignment at CM002472.1:115946..117383- (Nannochloropsis gaditana)
AGGATGCCATGCATAAATTCCGGGCAATGTAATGATGAGGCATATACTTT
TTATGGAATGCTAAAATCTTGTCAAGGCAGCTCGATCTCAGACGTCATAT
TTGAAAGCGTTTCCGTAGGCAACTTGATTTCTTCGCCCCCACCCTTTCAA
AGGCTGGTTGACATCCGCATCATTCACTCGGCTTCTTTTTTTATGCTTCC
TTTCTATGCTCGCCTTCAATCCCATTACGCGCATACGCAGTCACATCTTT
TCCTAATCATGCGCTTCTCTACCTCCATCGCCTCCGTCCTCTTCGCCGCT
GTGCCTATGGCCATGGCCCGCACTGTCATGATTGGTGACTCTATGTTTGC
CGGGGGGAGCAAGGTCAATAATTGGCTTCAGGTACGCCCGATGAAGAGGA
ATTTTTTCACAAACGTGTTCCTCGCCTGTGCATACCAATATGGGTGGTGA
CTCCCTTGTAAACGCATGGGGATGTCATACCTTGAAAATTGTCGAGCTCC
TCAGCCTTTTCCTACTCACCAGTCACTCTTGATCGCATTTTCCTCCCCCT
TGTTGCGTACCGATAGGAATGGGCAGGGCATGAGATCGAGAACATCGCCA
TCGTCGGTGCCTCGCTGCATGAGGGGTGGACCGAGAGCATTCCAGCAGAA
TACGCAGAGCTCGACAAGACGGTGGTGCCTACCACCATCATCATGGATGG
GGGCGGGAACGATGTCATCTCCAAACGCAGCGATTGCGAGTCTATGGACG
ACGCCTGCAGGCTTCAAATCGATGAGGCCGTGAGCATCGGCTCCGACCTG
CTGGAGCAAATGCACGAAGACGGAGTGGCCCATGTCATCTGGATGGGCTT
CTTCTACATCGGTGGCTTGGAGAAGGCGGCAGACTACGGCACGGAGAAGG
TGGCGGAGGCCTGCGCGACGGCAAAGATTGACTGCCACCTGGCCGACCTG
CGAGACTTGCAGATCCCCCGCGGGTGGGACGGGGTGCACCCAACGGACGA
GGGCTACAAGATGCTGGCGGAGAGGATCTGGGAGGTGAAGCTCGAGAACC
ACGTGCCTATTTAAAGGAAGGGCGAGGTCCGGGGCGGCAGTAGAGAGGAG
TGAGATCAGGAGTGAGTCGGGAGGCGGGGCGCCGGAGGAAGCTTGGGGGC
AAGACGGGCTCGACAGAGAAAGCGGTAATATGTAGACAAGTTAGGCAGAG
AAAACAGGGGATGGGATCCCTTGTGTTTCAACTCGGTGAAGGTGGAGGAT
CCGCCTTACTTGCATGTGCATGTCTACATCTCTGCTCTGAGCCCGGCGAT
TGAAGATTCGGTGCGTTGGCAAGGGCGCAGGAGCAGGAAAGAGGTAGAAG
GGACATACTCGCACGCTAACGCAGACGTTAGTCCTGAAAACAACAAGGCT
TTAAAGTACAATGTCGGAGGTATCCACATAGGCCGCAC
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Coding sequence (CDS) from alignment at CM002472.1:115946..117383-

>rna7506 ID=rna7506|Name=rna7506|organism=Nannochloropsis gaditana|type=CDS|length=1752bp|location=Sequence derived from alignment at CM002472.1:115946..117383- (Nannochloropsis gaditana)
GAATGGGCAGGGCATGAGATCGAGAACATCGCCATCGTCGGTGCCTCGCT
GCATGAGGGGTGGACCGAGAGCATTCCAGCAGAATACGCAGAGCTCGACA
AGACGGTGGTGCCTACCACCATCATCATGGATGGGGGCGGGAACGATGTC
ATCTCCAAACGCAGCGATTGCGAGTCTATGGACGACGCCTGCAGGCTTCA
AATCGATGAGGCCGTGAGCATCGGCTCCGACCTGCTGGAGCAAATGCACG
AAGACGGAGTGGCCCATGTCATCTGGATGGGCTTCTTCTACATCGGTGGC
TTGGAGAAGGCGGCAGACTACGGCACGGAGAAGGTGGCGGAGGCCTGCGC
GACGGCAAAGATTGACTGCCACCTGGCCGACCTGCGAGACTTGCAGATCC
CCCGCGGGTGGGACGGGGTGCACCCAACGGACGAGGGCTACAAGATGCTG
GCGGAGAGGATCTGGGAGGTGAAGCTCGAGAACCACGTGCCTATTTAAAT
GCCATGCATAAATTCCGGGCAATGTAATGATGAGGCATATACTTTTTATG
GAATGCTAAAATCTTGTCAAGGCAGCTCGATCTCAGACGTCATATTTGAA
AGCGTTTCCGTAGGCAACTTGATTTCTTCGCCCCCACCCTTTCAAAGGCT
GGTTGACATCCGCATCATTCACTCGGCTTCTTTTTTTATGCTTCCTTTCT
ATGCTCGCCTTCAATCCCATTACGCGCATACGCAGTCACATCTTTTCCTA
ATCATGCGCTTCTCTACCTCCATCGCCTCCGTCCTCTTCGCCGCTGTGCC
TATGGCCATGGCCCGCACTGTCATGATTGGTGACTCTATGTTTGCCGGGG
GGAGCAAGGTCAATAATTGGCTTCAGGAATGGGCAGGGCATGAGATCGAG
AACATCGCCATCGTCGGTGCCTCGCTGCATGAGGGGTGGACCGAGAGCAT
TCCAGCAGAATACGCAGAGCTCGACAAGACGGTGGTGCCTACCACCATCA
TCATGGATGGGGGCGGGAACGATGTCATCTCCAAACGCAGCGATTGCGAG
TCTATGGACGACGCCTGCAGGCTTCAAATCGATGAGGCCGTGAGCATCGG
CTCCGACCTGCTGGAGCAAATGCACGAAGACGGAGTGGCCCATGTCATCT
GGATGGGCTTCTTCTACATCGGTGGCTTGGAGAAGGCGGCAGACTACGGC
ACGGAGAAGGTGGCGGAGGCCTGCGCGACGGCAAAGATTGACTGCCACCT
GGCCGACCTGCGAGACTTGCAGATCCCCCGCGGGTGGGACGGGGTGCACC
CAACGGACGAGGGCTACAAGATGCTGGCGGAGAGGATCTGGGAGGTGAAG
CTCGAGAACCACGTGCCTATTTAAATGCCATGCATAAATTCCGGGCAATG
TAATGATGAGGCATATACTTTTTATGGAATGCTAAAATCTTGTCAAGGCA
GCTCGATCTCAGACGTCATATTTGAAAGCGTTTCCGTAGGCAACTTGATT
TCTTCGCCCCCACCCTTTCAAAGGCTGGTTGACATCCGCATCATTCACTC
GGCTTCTTTTTTTATGCTTCCTTTCTATGCTCGCCTTCAATCCCATTACG
CGCATACGCAGTCACATCTTTTCCTAATCATGCGCTTCTCTACCTCCATC
GCCTCCGTCCTCTTCGCCGCTGTGCCTATGGCCATGGCCCGCACTGTCAT
GATTGGTGACTCTATGTTTGCCGGGGGGAGCAAGGTCAATAATTGGCTTC
AG
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Synonyms
Publications