EWM23185.1, cds7488 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|585104073|gb|EWM23185.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana]) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query: 1 MPCINSGQCNDEAYTFYGMLKSCQGSSISDVIFESVSVGNLISSPPPFQRLVDIRIIHSASFFMLPFYARLQSHYAHTQSHLFLIMRFSTSIASVLFAAVPMAMARTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
MPCINSGQCNDEAYTFYGMLKSCQGSSISDVIFESVSVGNLISSPPPFQRLVDIRIIHSASFFMLPFYARLQSHYAHTQSHLFLIMRFSTSIASVLFAAVPMAMARTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI
Sbjct: 1 MPCINSGQCNDEAYTFYGMLKSCQGSSISDVIFESVSVGNLISSPPPFQRLVDIRIIHSASFFMLPFYARLQSHYAHTQSHLFLIMRFSTSIASVLFAAVPMAMARTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|553183672|ref|XP_005853939.1| (lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526] >gi|422295117|gb|EKU22416.1| lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 229.565 bits (584), Expect = 4.907e-72 Identity = 112/206 (54.37%), Postives = 143/206 (69.42%), Query Frame = 0
Query: 88 FSTSIASVLFAAVPMAMARTVMIGDSMFAGGSKVNNWLQEWAGHE--IENIAIVGASLHEGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
S +A+ LF + + RTVMIGDSMF+ + V N L+ +AG IEN+A+VGASLHEGW SIPAEY+ + K P TI+MDGGGNDVIS + DC S +D C+ QI EA I +DLLE+MHED V HV+ MG +Y+ L KA D G + ++ C A IDCH+AD RDL P G DG+HP EGY++LA RIWE+KL+N +PI
Sbjct: 1 MSRRLAATLFLLPALCLGRTVMIGDSMFSNNA-VKNALEYYAGGNVTIENMALVGASLHEGWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 205
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|553182994|ref|XP_005853822.1| (hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|422295241|gb|EKU22540.1| hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >gi|585112598|gb|EWM29990.1| hypothetical protein Naga_100276g6 [Nannochloropsis gaditana]) HSP 1 Score: 218.394 bits (555), Expect = 2.570e-67 Identity = 102/219 (46.58%), Postives = 145/219 (66.21%), Query Frame = 0
Query: 85 IMRFSTSIASVLFAAVPM---AMARTVMIGDSMFAGGSKV------NNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTV---VPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
+ F + + VP+ M+ TV++GDS+ AG V N +L +++G +++N A++G+SLH+GW +S+P Y ++ K VPTTI+++GGGNDVI+ R DC + +D CR QIDEA+ I LL MH+DGV HVI++GF+Y + +A DYG E + C A IDCH+AD R+L IP GWDG+HP DEGYK L+ RIWEVK N++PI
Sbjct: 5 LREFGLLVCMTAMSTVPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIPI 223
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|585108483|gb|EWM26439.1| (hypothetical protein Naga_100344g3 [Nannochloropsis gaditana]) HSP 1 Score: 176.407 bits (446), Expect = 5.431e-52 Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 0
Query: 145 EGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVPI 291
+ W SIPAEY+ + K P TI+MDGGGNDVIS + DC S +D C+ QI EA I +DLLE+MHED V HV+ MG +Y+ L KA D G + ++ C A IDCH+AD RDL P G DG+HP EGY++LA RIWE+KL+N +PI
Sbjct: 4 QRWVPSIPAEYSIMSKNPPPITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIPI 150
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|1182764890|emb|SMF04632.1| (Lysophospholipase L1 [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 115.546 bits (288), Expect = 1.904e-27 Identity = 58/187 (31.02%), Postives = 101/187 (54.01%), Query Frame = 0
Query: 104 MARTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYI----GGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRG---WDGVHPTDEGYKMLAERIWEV 283
+ T+++GDS+FA ++ L+ +G I + A GA + + + +Y +P T+IM+GGGNDV+ + C ++ C I+ A+ G DL++ M +DGV ++++G++Y GGL+ A DY ++ + C + C + + R L G DG+HPT G + +A+ IWEV
Sbjct: 40 LGDTIILGDSIFALNGEIERRLERNSGQRITSYARNGAEM-----DDVVQQYYRARARGIPQTVIMNGGGNDVLGNITSCRFLNSRCVNAIEGAIDQGVDLIQLMEDDGVERIVYLGYYYTKFIGGGLDNAIDYAMARIPQICGATNLPCDVVETRRLMNGFGNRIIDGIHPTFRGSRKMADAIWEV 221
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|521076579|ref|WP_020407486.1| (SGNH/GDSL hydrolase family protein [Hahella ganghwensis]) HSP 1 Score: 104.76 bits (260), Expect = 4.887e-23 Identity = 67/201 (33.33%), Postives = 107/201 (53.23%), Query Frame = 0
Query: 106 RTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEG-WTESIPAEY--AELDKTVVPTTIIMDGGGNDVISKR-----SDCES-------MDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGF-------FYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRG---WDGVHPTDEGYKMLAERIW 281
+ V IGDS+FA + ++L+++AG + GA L G SI +Y A D + + T I+MDGGGND++ DC++ + C+ I++ G +LL MH DGV++VI++G+ F + +E+A DYG K+A+AC+ + ++C D R I G +DG+HP G K LA+ +W
Sbjct: 55 QVVTIGDSIFALSGDLQDFLEDYAGETFRRYTLSGAELTGGVIATSIADQYEIARSDNSDIET-IVMDGGGNDILIPAIMLDPYDCKTQWYEFGKLSSTCKNYINDIYIDGVNLLNDMHADGVSNVIYLGYYHTKNGLFLLDSMEEAVDYGDAKLAQACSYSAVNCEFVDPRS-SINDGDIIFDGIHPNTGGSKKLADLVW 253
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|1097643629|emb|SFM36860.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter zhejiangensis]) HSP 1 Score: 103.219 bits (256), Expect = 1.695e-22 Identity = 63/201 (31.34%), Postives = 105/201 (52.24%), Query Frame = 0
Query: 106 RTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPT--TIIMDGGGNDVISKR-----SDCES-------MDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFY-------IGGLEKAADYGTEKVAEACATAKIDCHLADLR----DLQIPRGWDGVHPTDEGYKMLAERIW 281
+ V IGDS+FA ++ ++L++ AG + GA L G + + ++ ++ P TI+MDGGGND++ DC++ + +C+ I++ G +LL MH DGV +VI++G++Y + +E+A DYG ++A+AC + ++C D R D I DG+HPT G + LA IW
Sbjct: 55 QVVTIGDSIFALSGELQDFLEQDAGQTFRRYTLSGAELAGGAVATSIVDQYQIARSDNPAIDTIVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSSSCKNLINDIYVDGVNLLNDMHADGVDNVIYLGYYYTKNGLFLLDSMEEAVDYGDYRLAQACRYSAVNCQFVDPRSAINDSDIIA--DGIHPTTTGSRKLASLIW 253
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|1088945591|emb|SDW35142.1| (GDSL-like Lipase/Acylhydrolase [Marinobacter mobilis]) HSP 1 Score: 101.293 bits (251), Expect = 7.164e-22 Identity = 61/200 (30.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query: 106 RTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAELDKTVVPT--TIIMDGGGNDVISKR-----SDCES-------MDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFY-------IGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRG---WDGVHPTDEGYKMLAERIW 281
+ + IGDS+FA ++ ++L++ AG + GA L G + + ++ ++ P T++MDGGGND++ DC++ + +C+ I++ G +LL MH DGV HVI++G++Y + +E+A DYG ++A+AC + ++C D R I G DG+HP G + LA IW
Sbjct: 42 QVITIGDSIFALSGELQDFLEQDAGQTFRRYTLSGAELAGGAVATSIVDQYQIARSDNPAIDTVVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSRSCKDLINDIYVDGVNLLNDMHADGVDHVIYLGYYYTKNGLFLLDSMEEAVDYGDTRLAQACQYSAVNCQFIDPRS-AINDGDIIADGIHPNTTGSRKLANLIW 240
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|1149199120|ref|WP_077751379.1| (hypothetical protein [Shewanella psychrophila] >gi|1148951612|gb|AQS36039.1| hypothetical protein Sps_00847 [Shewanella psychrophila]) HSP 1 Score: 91.2781 bits (225), Expect = 4.084e-18 Identity = 56/194 (28.87%), Postives = 100/194 (51.55%), Query Frame = 0
Query: 108 VMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLHEG-WTESIPAEYAEL--DKTVVPTTIIMDGGGNDVISKRS-----DCES------MDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGG----LEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGW--DGVHPTDEGYKMLAERIW 281
+ +GDS++ ++ +L++ AG + GA L G S+ +YA+ D + + T I+M+GGGND++ C++ + ++C ID+ LL QM + V++V+++G+++ G L KA DYG +++EAC+ +DC D R + +P D +HPT G + +A IW
Sbjct: 47 ITLGDSIYDLSGEIQLFLEQDAGETFRDYTQSGAELAGGSLATSVITQYADAKSDNSTIET-IVMNGGGNDILIPAMLFDPYRCKTKWYRPNLTNSCISLIDDVYVDAVTLLNQMETESVSNVLYLGYYHTTGNLTSLIKAVDYGNTRLSEACSNTTVDCSFIDPRSVIVPSDVISDNIHPTTSGSQKMAALIW 239
BLAST of EWM23185.1 vs. NCBI_GenBank
Match: gi|500110461|ref|WP_011786466.1| (MULTISPECIES: hypothetical protein [Marinobacter] >gi|120325783|gb|ABM20098.1| hypothetical protein Maqu_3024 [Marinobacter hydrocarbonoclasticus VT8] >gi|550675599|gb|ERS00421.1| hypothetical protein Q673_09035 [Marinobacter sp. EN3] >gi|550787968|gb|ERS85775.1| hypothetical protein Q672_15640 [Marinobacter sp. EVN1]) HSP 1 Score: 91.2781 bits (225), Expect = 4.378e-18 Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 0
Query: 106 RTVMIGDSMFAGGSKVNNWLQEWAGHEIENIAIVGASLH-EGWTESIPAEYAE-LDKTVVPTTIIMDGGGNDVI-----SKRSDCES-------MDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFY-------IGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRG--WDGVHPTDEGYKMLAERIW 281
+ V +GDS+FA ++ N L+ AG + GA L E SIP ++ E + TI+ D GGND++ ++C++ + CR ID+ G D L +M E GV I G++Y + +++A DYG +A+AC + +DC D R + R +DG+HP D G K +A+ IW
Sbjct: 52 QVVFVGDSIFALSGEIQNQLEAKAGETFRRYTVSGAELSGELIAPSIPNQFREAVTDNPDIKTIVGDAGGNDILIPAIAFNSNNCKTPWWRFGRLSQQCRDFIDDIYVEGVDFLNEMAEAGVQKGILTGYYYTKNGLFRLDDMKEAVDYGNATLAKACENSVLDCTFVDPRWVINDRDIIFDGIHPADSGSKKIADLIW 250 The following BLAST results are available for this feature:
BLAST of EWM23185.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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