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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100808g2.4376.mrna |
| Orig protein id | gnl|cribi|Naga_100808g2.4376 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:85514..87610 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7492 ID=rna7492|Name=rna7492|organism=Nannochloropsis gaditana|type=mRNA|length=705bp
TCTCACGGAGAACCTCCTGAAAGGGAACGCCGTGTTTTTTTAATTAAGAG
AGAGGTTGAAAACCAAAAAGATGCTGGTGTCGGTCAGTAAGCAATTAAAG
ATCCGGACATGAGACATCTAATGGCGACACGTCGCAAGCAAGGCGGTGAC
ACATTTTTGCGTGAACTCAGGAGGGAGGGCAAATGTCATGGTGCTGTCAA
GCCAGCAGAAGGGGACTTGATATCGATGAATATACGACCTTTTTTTTTTC
ACTCCGCTTCCTTCCATTCTCGGTACAGTCTGTGCCCGTACCAAACATGA
GCTACGCCTACTTGTTCAAAAGCATCGTCATCGGAGATAGCGGCGTGGGA
AAATCTTGCCTGCTCTTGCAGTTCACAGACCGGCGGTTTGTTCAAGTTCA
CGACCTCACTATCGGCGTTGAGTTCGGCGCGCGCTTGGTGCACATTGATG
GAAAGGCGATCAAGCTCCAAATATGGGACACGGCGGGGCAGGAATCTTTC
CGCTCCATTACGCGATCCTACTACCGAGGCGCCGCCGGGGCCCTCCTCGT
TTACGATATCACACGTCGGGAGACTTTTAATCACTTGGCACGGTGGCTGG
AGGAGGCGAAGCTTTATTCCTCCCCCAACATGGTCATATATGCGATTCAG
CCGAGGAACACCCCCACTGCTGCCGGGATCCAAGTCTCGCCAAGCATCAT
TCCAG back to topprotein sequence of rna7492 >rna7492-protein ID=rna7492-protein|Name=rna7492|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATEN
DTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDS
LASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIK
GAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGW
LENVMNPLDASNVRG back to topmRNA from alignment at CM002472.1:85514..87610+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7492 ID=rna7492|Name=rna7492|organism=Nannochloropsis gaditana|type=mRNA|length=2097bp|location=Sequence derived from alignment at CM002472.1:85514..87610+ (Nannochloropsis gaditana)
TCACGCAAAAATGTGTCACCGCCTTGCTTGCGACGTGTCGCCATTAGATG
TCTCATGTCCGGATCTTTAATTGCTTACTGACCGACACCAGCATCTTTTT
GGTTTTCAACCTCTCTCTTAATTAAAAAAACACGGCGTTCCCTTTCAGGA
GGTTCTCCGTGAGAGCCAGTTCGACGCCTGAAACCTTTGGCAGGTCGTGA
ACTCACGCCTTCTCACCCGGACGTCCGTCCATGCACGGTGATCAATATGA
TCACGTAGAATGACAGACGCAGTGTTTTTTTGGGTTTTATGACTGGGAGC
TGACtgatgaggggagggaaacggagcTTCTGACTCCGCGATCCAGAGCT
TTCCTATTCTCATATTAATATCCTCGTTCTTGCCACGACTGGACTCATCA
ATGTATCCACTCACGAACAGAATGAaattcctcgtcttcctggtCGTGGC
AACGGCCACAATTGCCCACGCTTTTGTCCTCCCGCGGCCACCTTCAgctg
ccacgtcctccctgccgatCTCCCCAGCTCTTTACGCCGCAACGGGTAAG
CAAGTGGGGAACATTGCGTTCTAAGTGACTTGACGAGTTTCGACATGAAT
CGTGGGGTTTCCATGCTTTCGCTGACGATTGTTATGTTATTGACATTGGT
CTTTCTTCTGGCTCTTCCTCGacgtctcttttccctccctctggtcccct
cccccccttcacgccctccgtccatccctgccttccaccaTGCTGCGATA
GAAAACGACACGCCCTCTACCGACGATAGTCAAGCCACGCCTTCGGCCCC
CAAGAAAGCATTCAAAGGCTTTGGCGAGAAACCGCAGAAACGGGAACCCC
CCCCCAAGACCAAAGGACAAGTGGAACGGGAGAAGTATGCCTCTGCCTAc
gactccctcgcctccaaAGGGGTGCCTGAGTACGCCGTCTACATccgcga
gaaggagggaggggaaaaagactgGAAGTTTGTCGGGTCGATGGCGGTGC
CTCGCAACGCCAAGATCGATCAAGCCATCTACGAAAACGAGGTacgtttc
ttcctccctcttctccactcgtcccgcccctccctctctcctcatgCAAT
TTGTCCTACCTTTCGGCCttgcggggaggacgaccgTGATCCCCACAAGC
TGCTCCCGAAAGCTCCGTTTCTTCCCGCTTGCGtttccgcctctcccttt
ttgAGGGGGGCCTGAACCTGCCTAGACTACCCGGATTTTtcgctcttctc
ccctcttacGACGtactgcctcctcttcatgtACCCTTTCCCTGtgcttc
tcttctccttccctcctaccacgcgctttctcctctttgcatcggccctg
ccccccccgcgaCGTTTATCTCGTGACCCGATGGCCCACGCCTACGTCAC
CTCACGCATTGTCTCCTCGCGGGGCACGACCCCACAATTTCACAGTCGAA
CCTGATAAAAGGGGCCTATAAACTGCACCCGAAGCTggttgggaaggaga
aggagagcttTGTGTACGGCTTCAACCTCAAGAAGTTTCCGGACGAGCCT
ATCAAGGTAAGCTTGGTTCTCAAGAGCCTTCCTCACGACTTAGGTGGCCA
CCCTTGCATGTCTTTGGCGCCCGCGTGGATCGATTCCGGCATTGGCCCAT
CCCCCgggctcctcttttcccacggGGTCGACGCAATGCCGGGCTCccaa
ttttctttttcccctgtcactccctcctcctctgaaGTGTCAAGTCATGT
TTTGTAGTGTGCAAGCACGCGCCTCGGCTTGTCGTAAGCCCTCATGTAAc
cctacctccctcttccttccttccccctcacctctTACCTCCACCCCTCA
CCTCATTACCTCCATTCAGCTGGCCGTGAAACCCGCGGAGGGCAGTGGGA
ACAAAAACCCTGTCATTGGCTGGCTGGAGAACGTGATGAATCCATTGGAT
GCATCCAATGTACGGGGGTAGGCGGtcgaaaagaaaggggtCGTGAGcag
gaggccagggaggaggaggaggaggaggaggaggggaattCATCCCAGGC
AGGGTTCCACGGAAAGAAACGAGCAAATGACAATACCCTCCTCGGGC back to topCoding sequence (CDS) from alignment at CM002472.1:85514..87610+ >rna7492 ID=rna7492|Name=rna7492|organism=Nannochloropsis gaditana|type=CDS|length=2592bp|location=Sequence derived from alignment at CM002472.1:85514..87610+ (Nannochloropsis gaditana)
ATGTATCCACTCACGAACAGAATGAaattcctcgtcttcctggtCGTGGC
AACGGCCACAATTGCCCACGCTTTTGTCCTCCCGCGGCCACCTTCAgctg
ccacgtcctccctgccgatCTCCCCAGCTCTTTACGCCGCAACGGAAAAC
GACACGCCCTCTACCGACGATAGTCAAGCCACGCCTTCGGCCCCCAAGAA
AGCATTCAAAGGCTTTGGCGAGAAACCGCAGAAACGGGAACCCCCCCCCA
AGACCAAAGGACAAGTGGAACGGGAGAAGTATGCCTCTGCCTAcgactcc
ctcgcctccaaAGGGGTGCCTGAGTACGCCGTCTACATccgcgagaagga
gggaggggaaaaagactgGAAGTTTGTCGGGTCGATGGCGGTGCCTCGCA
ACGCCAAGATCGATCAAGCCATCTACGAAAACGAGTCGAACCTGATAAAA
GGGGCCTATAAACTGCACCCGAAGCTggttgggaaggagaaggagagctt
TGTGTACGGCTTCAACCTCAAGAAGTTTCCGGACGAGCCTATCAAGCTGG
CCGTGAAACCCGCGGAGGGCAGTGGGAACAAAAACCCTGTCATTGGCTGG
CTGGAGAACGTGATGAATCCATTGGATGCATCCAATGTACGGGGGTAGAT
GTATCCACTCACGAACAGAATGAaattcctcgtcttcctggtCGTGGCAA
CGGCCACAATTGCCCACGCTTTTGTCCTCCCGCGGCCACCTTCAgctgcc
acgtcctccctgccgatCTCCCCAGCTCTTTACGCCGCAACGGAAAACGA
CACGCCCTCTACCGACGATAGTCAAGCCACGCCTTCGGCCCCCAAGAAAG
CATTCAAAGGCTTTGGCGAGAAACCGCAGAAACGGGAACCCCCCCCCAAG
ACCAAAGGACAAGTGGAACGGGAGAAGTATGCCTCTGCCTAcgactccct
cgcctccaaAGGGGTGCCTGAGTACGCCGTCTACATccgcgagaaggagg
gaggggaaaaagactgGAAGTTTGTCGGGTCGATGGCGGTGCCTCGCAAC
GCCAAGATCGATCAAGCCATCTACGAAAACGAGTCGAACCTGATAAAAGG
GGCCTATAAACTGCACCCGAAGCTggttgggaaggagaaggagagcttTG
TGTACGGCTTCAACCTCAAGAAGTTTCCGGACGAGCCTATCAAGCTGGCC
GTGAAACCCGCGGAGGGCAGTGGGAACAAAAACCCTGTCATTGGCTGGCT
GGAGAACGTGATGAATCCATTGGATGCATCCAATGTACGGGGGTAGATGT
ATCCACTCACGAACAGAATGAaattcctcgtcttcctggtCGTGGCAACG
GCCACAATTGCCCACGCTTTTGTCCTCCCGCGGCCACCTTCAgctgccac
gtcctccctgccgatCTCCCCAGCTCTTTACGCCGCAACGGAAAACGACA
CGCCCTCTACCGACGATAGTCAAGCCACGCCTTCGGCCCCCAAGAAAGCA
TTCAAAGGCTTTGGCGAGAAACCGCAGAAACGGGAACCCCCCCCCAAGAC
CAAAGGACAAGTGGAACGGGAGAAGTATGCCTCTGCCTAcgactccctcg
cctccaaAGGGGTGCCTGAGTACGCCGTCTACATccgcgagaaggaggga
ggggaaaaagactgGAAGTTTGTCGGGTCGATGGCGGTGCCTCGCAACGC
CAAGATCGATCAAGCCATCTACGAAAACGAGTCGAACCTGATAAAAGGGG
CCTATAAACTGCACCCGAAGCTggttgggaaggagaaggagagcttTGTG
TACGGCTTCAACCTCAAGAAGTTTCCGGACGAGCCTATCAAGCTGGCCGT
GAAACCCGCGGAGGGCAGTGGGAACAAAAACCCTGTCATTGGCTGGCTGG
AGAACGTGATGAATCCATTGGATGCATCCAATGTACGGGGGTAGATGTAT
CCACTCACGAACAGAATGAaattcctcgtcttcctggtCGTGGCAACGGC
CACAATTGCCCACGCTTTTGTCCTCCCGCGGCCACCTTCAgctgccacgt
cctccctgccgatCTCCCCAGCTCTTTACGCCGCAACGGAAAACGACACG
CCCTCTACCGACGATAGTCAAGCCACGCCTTCGGCCCCCAAGAAAGCATT
CAAAGGCTTTGGCGAGAAACCGCAGAAACGGGAACCCCCCCCCAAGACCA
AAGGACAAGTGGAACGGGAGAAGTATGCCTCTGCCTAcgactccctcgcc
tccaaAGGGGTGCCTGAGTACGCCGTCTACATccgcgagaaggagggagg
ggaaaaagactgGAAGTTTGTCGGGTCGATGGCGGTGCCTCGCAACGCCA
AGATCGATCAAGCCATCTACGAAAACGAGTCGAACCTGATAAAAGGGGCC
TATAAACTGCACCCGAAGCTggttgggaaggagaaggagagcttTGTGTA
CGGCTTCAACCTCAAGAAGTTTCCGGACGAGCCTATCAAGCTGGCCGTGA
AACCCGCGGAGGGCAGTGGGAACAAAAACCCTGTCATTGGCTGGCTGGAG
AACGTGATGAATCCATTGGATGCATCCAATGTACGGGGGTAG back to top
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