EWM23200.1, cds7474 (CDS) Nannochloropsis gaditana

Overview
NameEWM23200.1
Unique Namecds7474
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:85914..86058 +
Alignment locationCM002472.1:86265..86554 +
Alignment locationCM002472.1:86959..87069 +
Alignment locationCM002472.1:87383..87484 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23200.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100808g2.4376.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:85914..86058 +
CM002472.1supercontigCM002472.1:86265..86554 +
CM002472.1supercontigCM002472.1:86959..87069 +
CM002472.1supercontigCM002472.1:87383..87484 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|585104098|gb|EWM23200.1| (hypothetical protein Naga_100808g2 [Nannochloropsis gaditana])

HSP 1 Score: 436.032 bits (1120), Expect = 9.667e-155
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query:    1 MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
            MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG
Sbjct:    1 MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|873229899|emb|CEM11905.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 132.494 bits (332), Expect = 1.267e-34
Identity = 79/155 (50.97%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   67 KAFKGFGEKPQKREPPPKTKGQV--EREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKL----VGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
            K FKGFG+KP K     K    +  E +KYA AYD LA+KG+PEYAV+ R K   ++ W  VGSMAVPR  KID  IY+ E  + KG +KL+PKL     G E E F YG+NL+ +PDEP+K+A KP    G KN  + W E++MNPLDAS  +G
Sbjct:   94 KDFKGFGDKPPKPVKKGKKDNDLDPEAQKYAKAYDELAAKGIPEYAVWARPKGLPDEAWVPVGSMAVPRKMKIDDVIYKEEEQMKKGLFKLYPKLKESPEGGEAE-FEYGYNLRAYPDEPVKVAKKPQ--GGEKNEFVQWFESLMNPLDASKAKG 245          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|219130667|ref|XP_002185481.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403012|gb|EEC42968.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 116.316 bits (290), Expect = 4.469e-29
Identity = 61/146 (41.78%), Postives = 96/146 (65.75%), Query Frame = 0
Query:   68 AFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNV 213
            A KGFG  P+ ++   K++GQV+REK +S YD +A  G  EY++++R+    ++ W   GS+AVPRNA++  A+Y N+  L K   + +PKL G E+E F +G+NLK +PD+PI++AVK     G  + V  W+  +++P+DAS V
Sbjct:   34 ATKGFGAGPEPKKA--KSEGQVKREKESSKYDEIAGTGGQEYSIFVRQFGSDDQSWLPCGSVAVPRNAQVSDAVYANDEALRKAIVRTYPKLRGSEEE-FEFGYNLKVYPDDPIEVAVKGKPRPGGLS-VGNWISTLLSPVDASKV 175          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1072231516|gb|OEU16248.1| (hypothetical protein FRACYDRAFT_261155 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 114.775 bits (286), Expect = 1.597e-28
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   70 KGFGE-KPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIG-WLENVMNPLDASN 212
            KGFG     K+    K+ GQVERE+ +S YD +A  G  EYAV++R+    +  W   GS+AV R  ++  AI+ NE  L  G  +  PKL+G E E F YG+NLK +PDEP+++A K A G G   P IG W+ N+++P+DAS+
Sbjct:   42 KGFGNVDDTKKVEKSKSDGQVERERASSKYDEIAKSGGQEYAVFVRQFGSPDDSWLPCGSVAVARGDQVSNAIFGNEEALKIGIVRTFPKLMGSEAE-FEYGYNLKIYPDEPVEVASKRAGGDG---PSIGNWMSNLLSPIDASS 182          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|223995137|ref|XP_002287252.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976368|gb|EED94695.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 110.153 bits (274), Expect = 1.104e-26
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 0
Query:   40 ISPALYAATEN--DTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIG-WLENVMNPLDASNV 213
            ++ AL  +T N    P T ++ +  S    A KGFG  P + +   K+ GQV+RE+ AS YD +A+ G  EY +++R+    +K W   GS+AVPR +++  AI+ NE  L     + +P L G E E F YG+NLK +PD+P+++A+K  +G  +  P +G W+ N+++P+D S V
Sbjct:   10 LAAALVMSTTNAFTVPLTSNTISQSSTQLYA-KGFGPPPPEPKK--KSAGQVDREQKASKYDEIAATGGQEYRIFVRQFGSDDKSWLPTGSIAVPRGSQVSDAIFSNEEGLRTAIVRAYPALKGNEIE-FEYGYNLKVYPDDPVQVAMK-GQGGVSSGPSVGNWISNLLSPVDTSGV 181          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1210527403|dbj|GAX14038.1| (hypothetical protein FisN_5Lh039 [Fistulifera solaris])

HSP 1 Score: 109.768 bits (273), Expect = 2.122e-26
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 0
Query:   61 TPSAPKKAF-------KGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAV--KPAEGS---GNKNPVIGWLENVMNPLDASNVR 214
            TPSAP           KGFGEKP    P  K++GQ++RE     YD LA  G  EY++++R+    +K W   G++AVPR +++  AIY NE++L     + +PKL G E E F +GFNLK +PD+P+++AV  KP E     GN      W+  +++P+DAS+V+
Sbjct:   32 TPSAPVTLTTTALAQSKGFGEKPA---PKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFEAE-FEFGFNLKVYPDDPVEVAVKGKPKETGLSLGN------WISTLLSPVDASSVK 186          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1210523714|dbj|GAX17396.1| (hypothetical protein FisN_5Hh039 [Fistulifera solaris])

HSP 1 Score: 107.842 bits (268), Expect = 8.296e-26
Identity = 61/150 (40.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   70 KGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAV--KPAEGS---GNKNPVIGWLENVMNPLDASNVR 214
            KGFG+KP    P  K++GQ++RE     YD LA  G  EY++++R+    +K W   G++AVPR +++  AIY NE++L     + +PKL G E E F +GFNLK +PD+P+++AV  KP E     GN      W+  +++P+DAS+V+
Sbjct:   46 KGFGDKPA---PKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFEAE-FEFGFNLKVYPDDPVEVAVKGKPKEAGLSLGN------WISTLLSPVDASSVK 184          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|504985795|ref|WP_015172897.1| (hypothetical protein [Geitlerinema sp. PCC 7407] >gi|427986189|gb|AFY67333.1| hypothetical protein GEI7407_2862 [Geitlerinema sp. PCC 7407])

HSP 1 Score: 101.293 bits (251), Expect = 1.048e-23
Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 0
Query:   71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGS 191
            GFG     ++     K   +R+  AS YD + S G+PE+ V++R +  G+K+W  VGS+AV R+ +I+QAI+ NE  L+KGA++L P L  K  +   YG+ LK+FPDEP++LA KPA G+
Sbjct:    6 GFGTPKHAQKKEKVAKSAEKRQAAASQYDKMKSDGMPEFVVFVRVR--GKKNWFPVGSIAVGRSNQINQAIFANEDELLKGAFRLSPHLR-KHTDDLEYGYRLKEFPDEPVQLAEKPAPGA 123          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|497454684|ref|WP_009768882.1| (hypothetical protein [Oscillatoriales cyanobacterium JSC-12] >gi|410709101|gb|EKQ66616.1| hypothetical protein OsccyDRAFT_4404 [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 99.3673 bits (246), Expect = 5.037e-23
Identity = 54/138 (39.13%), Postives = 89/138 (64.49%), Query Frame = 0
Query:   71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPL 208
            GFG+  Q ++P   +K   +R   +  YD + S+G+PE+ ++IR K+   K+W  VGS+AV R+++I +AI+E E+ L++GA++L P ++ K + +  YG+ LK+F DEPI+LAV+P   SG  N + G +  V N  
Sbjct:    6 GFGKSKQTKQP---SKAADKRVAASKQYDKMKSEGLPEFNIFIRIKDN--KNWFPVGSLAVNRSSQISRAIFEKEAELLQGAFRLFP-VLRKSQNNLEYGYRLKEFSDEPIQLAVRPE--SGKDNLLQGVISQVQNAF 135          
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|515859106|ref|WP_017289734.1| (hypothetical protein [Leptolyngbya boryana] >gi|932875673|dbj|BAS55725.1| hypothetical protein LBWT_16300 [Leptolyngbya boryana IAM M-101] >gi|932882313|dbj|BAS62073.1| hypothetical protein LBDG_16300 [Leptolyngbya boryana dg5] >gi|1210139010|dbj|BAY58115.1| hypothetical protein NIES2135_49880 [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 98.2117 bits (243), Expect = 1.426e-22
Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEG 190
            GFG+K  K +   +T G  +R + +  +D   SKG+PEY +Y+R +   +  W  +G++AV R+++I  AIY NE  L+KGA++L P L  KE+ES  YG+ LK+F DE I+LAV+P  G
Sbjct:    6 GFGKKVHKEKK--QTTGTAKRAQASKQFDDFKSKGLPEYEIYLRVQGKKKLQWFPIGAIAVKRSSQISAAIYANEEELLKGAFRLFPGLR-KERESLEYGYRLKEFKDEEIQLAVRPTPG 122          
The following BLAST results are available for this feature:
BLAST of EWM23200.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104098|gb|EWM23200.1|9.667e-155100.00hypothetical protein Naga_100808g2 [Nannochloropsi... [more]
gi|873229899|emb|CEM11905.1|1.267e-3450.97unnamed protein product [Vitrella brassicaformis C... [more]
gi|219130667|ref|XP_002185481.1|4.469e-2941.78predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072231516|gb|OEU16248.1|1.597e-2844.14hypothetical protein FRACYDRAFT_261155 [Fragilario... [more]
gi|223995137|ref|XP_002287252.1|1.104e-2637.29predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210527403|dbj|GAX14038.1|2.122e-2640.36hypothetical protein FisN_5Lh039 [Fistulifera sola... [more]
gi|1210523714|dbj|GAX17396.1|8.296e-2640.67hypothetical protein FisN_5Hh039 [Fistulifera sola... [more]
gi|504985795|ref|WP_015172897.1|1.048e-2343.80hypothetical protein [Geitlerinema sp. PCC 7407] >... [more]
gi|497454684|ref|WP_009768882.1|5.037e-2339.13hypothetical protein [Oscillatoriales cyanobacteri... [more]
gi|515859106|ref|WP_017289734.1|1.426e-2243.33hypothetical protein [Leptolyngbya boryana] >gi|93... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7492rna7492Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications