EWM23200.1, cds7474 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|585104098|gb|EWM23200.1| (hypothetical protein Naga_100808g2 [Nannochloropsis gaditana]) HSP 1 Score: 436.032 bits (1120), Expect = 9.667e-155 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG
Sbjct: 1 MYPLTNRMKFLVFLVVATATIAHAFVLPRPPSAATSSLPISPALYAATENDTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|873229899|emb|CEM11905.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 132.494 bits (332), Expect = 1.267e-34 Identity = 79/155 (50.97%), Postives = 100/155 (64.52%), Query Frame = 0
Query: 67 KAFKGFGEKPQKREPPPKTKGQV--EREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKL----VGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNVRG 215
K FKGFG+KP K K + E +KYA AYD LA+KG+PEYAV+ R K ++ W VGSMAVPR KID IY+ E + KG +KL+PKL G E E F YG+NL+ +PDEP+K+A KP G KN + W E++MNPLDAS +G
Sbjct: 94 KDFKGFGDKPPKPVKKGKKDNDLDPEAQKYAKAYDELAAKGIPEYAVWARPKGLPDEAWVPVGSMAVPRKMKIDDVIYKEEEQMKKGLFKLYPKLKESPEGGEAE-FEYGYNLRAYPDEPVKVAKKPQ--GGEKNEFVQWFESLMNPLDASKAKG 245
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|219130667|ref|XP_002185481.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403012|gb|EEC42968.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 116.316 bits (290), Expect = 4.469e-29 Identity = 61/146 (41.78%), Postives = 96/146 (65.75%), Query Frame = 0
Query: 68 AFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPLDASNV 213
A KGFG P+ ++ K++GQV+REK +S YD +A G EY++++R+ ++ W GS+AVPRNA++ A+Y N+ L K + +PKL G E+E F +G+NLK +PD+PI++AVK G + V W+ +++P+DAS V
Sbjct: 34 ATKGFGAGPEPKKA--KSEGQVKREKESSKYDEIAGTGGQEYSIFVRQFGSDDQSWLPCGSVAVPRNAQVSDAVYANDEALRKAIVRTYPKLRGSEEE-FEFGYNLKVYPDDPIEVAVKGKPRPGGLS-VGNWISTLLSPVDASKV 175
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1072231516|gb|OEU16248.1| (hypothetical protein FRACYDRAFT_261155 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 114.775 bits (286), Expect = 1.597e-28 Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 0
Query: 70 KGFGE-KPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIG-WLENVMNPLDASN 212
KGFG K+ K+ GQVERE+ +S YD +A G EYAV++R+ + W GS+AV R ++ AI+ NE L G + PKL+G E E F YG+NLK +PDEP+++A K A G G P IG W+ N+++P+DAS+
Sbjct: 42 KGFGNVDDTKKVEKSKSDGQVERERASSKYDEIAKSGGQEYAVFVRQFGSPDDSWLPCGSVAVARGDQVSNAIFGNEEALKIGIVRTFPKLMGSEAE-FEYGYNLKIYPDEPVEVASKRAGGDG---PSIGNWMSNLLSPIDASS 182
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|223995137|ref|XP_002287252.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976368|gb|EED94695.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 110.153 bits (274), Expect = 1.104e-26 Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 0
Query: 40 ISPALYAATEN--DTPSTDDSQATPSAPKKAFKGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIG-WLENVMNPLDASNV 213
++ AL +T N P T ++ + S A KGFG P + + K+ GQV+RE+ AS YD +A+ G EY +++R+ +K W GS+AVPR +++ AI+ NE L + +P L G E E F YG+NLK +PD+P+++A+K +G + P +G W+ N+++P+D S V
Sbjct: 10 LAAALVMSTTNAFTVPLTSNTISQSSTQLYA-KGFGPPPPEPKK--KSAGQVDREQKASKYDEIAATGGQEYRIFVRQFGSDDKSWLPTGSIAVPRGSQVSDAIFSNEEGLRTAIVRAYPALKGNEIE-FEYGYNLKVYPDDPVQVAMK-GQGGVSSGPSVGNWISNLLSPVDTSGV 181
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1210527403|dbj|GAX14038.1| (hypothetical protein FisN_5Lh039 [Fistulifera solaris]) HSP 1 Score: 109.768 bits (273), Expect = 2.122e-26 Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 0
Query: 61 TPSAPKKAF-------KGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAV--KPAEGS---GNKNPVIGWLENVMNPLDASNVR 214
TPSAP KGFGEKP P K++GQ++RE YD LA G EY++++R+ +K W G++AVPR +++ AIY NE++L + +PKL G E E F +GFNLK +PD+P+++AV KP E GN W+ +++P+DAS+V+
Sbjct: 32 TPSAPVTLTTTALAQSKGFGEKPA---PKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFEAE-FEFGFNLKVYPDDPVEVAVKGKPKETGLSLGN------WISTLLSPVDASSVK 186
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|1210523714|dbj|GAX17396.1| (hypothetical protein FisN_5Hh039 [Fistulifera solaris]) HSP 1 Score: 107.842 bits (268), Expect = 8.296e-26 Identity = 61/150 (40.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query: 70 KGFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAV--KPAEGS---GNKNPVIGWLENVMNPLDASNVR 214
KGFG+KP P K++GQ++RE YD LA G EY++++R+ +K W G++AVPR +++ AIY NE++L + +PKL G E E F +GFNLK +PD+P+++AV KP E GN W+ +++P+DAS+V+
Sbjct: 46 KGFGDKPA---PKVKSEGQIKREAERQRYDELAKTG-QEYSIFVRQFGSDDKAWLPCGAIAVPRGSQVSDAIYANENDLKAAIVRTYPKLRGFEAE-FEFGFNLKVYPDDPVEVAVKGKPKEAGLSLGN------WISTLLSPVDASSVK 184
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|504985795|ref|WP_015172897.1| (hypothetical protein [Geitlerinema sp. PCC 7407] >gi|427986189|gb|AFY67333.1| hypothetical protein GEI7407_2862 [Geitlerinema sp. PCC 7407]) HSP 1 Score: 101.293 bits (251), Expect = 1.048e-23 Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 0
Query: 71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGS 191
GFG ++ K +R+ AS YD + S G+PE+ V++R + G+K+W VGS+AV R+ +I+QAI+ NE L+KGA++L P L K + YG+ LK+FPDEP++LA KPA G+
Sbjct: 6 GFGTPKHAQKKEKVAKSAEKRQAAASQYDKMKSDGMPEFVVFVRVR--GKKNWFPVGSIAVGRSNQINQAIFANEDELLKGAFRLSPHLR-KHTDDLEYGYRLKEFPDEPVQLAEKPAPGA 123
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|497454684|ref|WP_009768882.1| (hypothetical protein [Oscillatoriales cyanobacterium JSC-12] >gi|410709101|gb|EKQ66616.1| hypothetical protein OsccyDRAFT_4404 [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 99.3673 bits (246), Expect = 5.037e-23 Identity = 54/138 (39.13%), Postives = 89/138 (64.49%), Query Frame = 0
Query: 71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEGSGNKNPVIGWLENVMNPL 208
GFG+ Q ++P +K +R + YD + S+G+PE+ ++IR K+ K+W VGS+AV R+++I +AI+E E+ L++GA++L P ++ K + + YG+ LK+F DEPI+LAV+P SG N + G + V N
Sbjct: 6 GFGKSKQTKQP---SKAADKRVAASKQYDKMKSEGLPEFNIFIRIKDN--KNWFPVGSLAVNRSSQISRAIFEKEAELLQGAFRLFP-VLRKSQNNLEYGYRLKEFSDEPIQLAVRPE--SGKDNLLQGVISQVQNAF 135
BLAST of EWM23200.1 vs. NCBI_GenBank
Match: gi|515859106|ref|WP_017289734.1| (hypothetical protein [Leptolyngbya boryana] >gi|932875673|dbj|BAS55725.1| hypothetical protein LBWT_16300 [Leptolyngbya boryana IAM M-101] >gi|932882313|dbj|BAS62073.1| hypothetical protein LBDG_16300 [Leptolyngbya boryana dg5] >gi|1210139010|dbj|BAY58115.1| hypothetical protein NIES2135_49880 [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 98.2117 bits (243), Expect = 1.426e-22 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query: 71 GFGEKPQKREPPPKTKGQVEREKYASAYDSLASKGVPEYAVYIREKEGGEKDWKFVGSMAVPRNAKIDQAIYENESNLIKGAYKLHPKLVGKEKESFVYGFNLKKFPDEPIKLAVKPAEG 190
GFG+K K + +T G +R + + +D SKG+PEY +Y+R + + W +G++AV R+++I AIY NE L+KGA++L P L KE+ES YG+ LK+F DE I+LAV+P G
Sbjct: 6 GFGKKVHKEKK--QTTGTAKRAQASKQFDDFKSKGLPEYEIYLRVQGKKKLQWFPIGAIAVKRSSQISAAIYANEEELLKGAFRLFPGLR-KERESLEYGYRLKEFKDEEIQLAVRPTPG 122 The following BLAST results are available for this feature:
BLAST of EWM23200.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|