rna7491, rna7491 (mRNA) Nannochloropsis gaditana

Overview
Namerna7491
Unique Namerna7491
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length330
Alignment locationCM002472.1:84500..85677 -

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Properties
Property NameValue
Productras-related protein rab-2b
Orig transcript idgnl|cribi|Naga_100808g1.4375.mrna
Orig protein idgnl|cribi|Naga_100808g1.4375
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:84500..85677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100808g1gene7252Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7491rna7491-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23199.1cds7473Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7491 ID=rna7491|Name=rna7491|organism=Nannochloropsis gaditana|type=mRNA|length=330bp
CATCCCATCCTCGCTCCGCCTTTCACTTTGCTGCCTACTTTCGCTTTTCT
TTGGCCCTGGCGGAAGGCTGTCGTCTTACCTCCCTCCATCCCTCCATCCC
TCCCTCCCTCCCTTACTCCCCCAGACACACGGCATCAAAGTGGGTGTTCC
GGGGCCCGGGCAAACAGGAAAGAAAACGAGGGGGAGGGAAGGGGGGAAAG
CGTCGGGAAGTGGATGTTGCTAACCGATTTTGATTTTTTTAATGTTACAC
ATGTACATACAAAAAGAAGGCTCCGGGTTGTTGGGAGTGGGAGGAGAGGA
AAAGAAAAAATATGAAGTCTGAACAAGGCG
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protein sequence of rna7491

>rna7491-protein ID=rna7491-protein|Name=rna7491|organism=Nannochloropsis gaditana|type=polypeptide|length=174bp
MSWCCQASRRGLDIDEYTTFFFSLRFLPFSVQSVPVPNMSYAYLFKSIVI
GDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLVHIDGKAIKLQIWDT
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLARWLEEAKLYSSPNM
VIYAIQPRNTPTAAGIQVSPSIIP
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mRNA from alignment at CM002472.1:84500..85677-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7491 ID=rna7491|Name=rna7491|organism=Nannochloropsis gaditana|type=mRNA|length=1178bp|location=Sequence derived from alignment at CM002472.1:84500..85677- (Nannochloropsis gaditana)
TCTCACGGAGAACCTCCTGAAAGGGAACGCCGTGTTTTTTTAATTAAGAG
AGAGGTTGAAAACCAAAAAGATGCTGGTGTCGGTCAGTAAGCAATTAAAG
ATCCGGACATGAGACATCTAATGGCGACACGTCGCAAGCAAGGCGGTGAC
ACATTTTTGCGTGAACTCAGGAGGGAGGGCAAATGTCATGGTGCTGTCAA
GCCAGCAGAAGGGGACTTGATATCGATGAATATACGACCTTTTTTTTTTC
ACTCCGCTTCCTTCCATTCTCGGTACAGTCTGTGCCCGTACCAAACATGA
GCTACGCCTACTTGTTCAAAAGCATCGTCATCGGAGATAGCGGTACGCCG
TGGTTTTTACGTGGGGGGAGGAGGGGTGGCACGTTTTGAGAGAGAGATGA
GACAGTGCCCGTATGGGATTATGATGTCCTCGTGCCTACGCATTACCTTT
TCGGTTCGTCGCTCCTTCTCTGATCATGATTGACACTGCCTTGCACGCCA
GGCGTGGGAAAATCTTGCCTGCTCTTGCAGTTCACAGACCGGCGGTTTGT
TCAAGTTCACGACCTCACTATCGGTGAGTAAGACGTCAACATATCCATCA
CTCAAAACCCGTGCCCCGCCTTAGACGTACATACTGCCAGTAAGCCGTGC
TCATTCCTCCCCTATTCCCTCCTACTCTCCACTTCCCTCTCTCACCGCAG
GCGTTGAGTTCGGCGCGCGCTTGGTGCACATTGATGGAAAGGCGATCAAG
CTCCAAATATGGGACACGGCGGGGCAGGAATCTTTCCGCTCCATTACGCG
ATCCTACTACCGAGGGTCTGTCCCCTGGGCCCCTCCTACCTACCTTCCTC
CCTCCCTCCCTCCCGCCCTCCCTCCCTCCCTGCCTCCCTCCCTTCCTTCC
TTCCTTCCTTCCCTCGTCCCTCCCTCCTCTCGATCAGGACATACACAACC
CATCCCCGACATCCCCCTCCCTTCCCCCCTACCCCCGTCCCTCATTCTCC
AGCGCCGCCGGGGCCCTCCTCGTTTACGATATCACACGTCGGGAGACTTT
TAATCACTTGGCACGGTGGCTGGAGGAGGCGAAGCTTTATTCCTCCCCCA
ACATGGTCATATATGCGATTCAGCCGAGGAACACCCCCACTGCTGCCGGG
ATCCAAGTCTCGCCAAGCATCATTCCAG
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Coding sequence (CDS) from alignment at CM002472.1:84500..85677-

>rna7491 ID=rna7491|Name=rna7491|organism=Nannochloropsis gaditana|type=CDS|length=2092bp|location=Sequence derived from alignment at CM002472.1:84500..85677- (Nannochloropsis gaditana)
CGCCGCCGGGGCCCTCCTCGTTTACGATATCACACGTCGGGAGACTTTTA
ATCACTTGGCACGGTGGCTGGAGGAGGCGAAGCTTTATTCCTCCCCCAAC
ATGGTCATATATGCGATTCAGCCGAGGAACACCCCCACTGCTGCCGGGAT
CCAAGTCTCGCCAAGCATCATTCCAGGCGTTGAGTTCGGCGCGCGCTTGG
TGCACATTGATGGAAAGGCGATCAAGCTCCAAATATGGGACACGGCGGGG
CAGGAATCTTTCCGCTCCATTACGCGATCCTACTACCGAGGGCGTGGGAA
AATCTTGCCTGCTCTTGCAGTTCACAGACCGGCGGTTTGTTCAAGTTCAC
GACCTCACTATCGATGTCATGGTGCTGTCAAGCCAGCAGAAGGGGACTTG
ATATCGATGAATATACGACCTTTTTTTTTTCACTCCGCTTCCTTCCATTC
TCGGTACAGTCTGTGCCCGTACCAAACATGAGCTACGCCTACTTGTTCAA
AAGCATCGTCATCGGAGATAGCGCGCCGCCGGGGCCCTCCTCGTTTACGA
TATCACACGTCGGGAGACTTTTAATCACTTGGCACGGTGGCTGGAGGAGG
CGAAGCTTTATTCCTCCCCCAACATGGTCATATATGCGATTCAGCCGAGG
AACACCCCCACTGCTGCCGGGATCCAAGTCTCGCCAAGCATCATTCCAGG
CGTTGAGTTCGGCGCGCGCTTGGTGCACATTGATGGAAAGGCGATCAAGC
TCCAAATATGGGACACGGCGGGGCAGGAATCTTTCCGCTCCATTACGCGA
TCCTACTACCGAGGGCGTGGGAAAATCTTGCCTGCTCTTGCAGTTCACAG
ACCGGCGGTTTGTTCAAGTTCACGACCTCACTATCGATGTCATGGTGCTG
TCAAGCCAGCAGAAGGGGACTTGATATCGATGAATATACGACCTTTTTTT
TTTCACTCCGCTTCCTTCCATTCTCGGTACAGTCTGTGCCCGTACCAAAC
ATGAGCTACGCCTACTTGTTCAAAAGCATCGTCATCGGAGATAGCGCGCC
GCCGGGGCCCTCCTCGTTTACGATATCACACGTCGGGAGACTTTTAATCA
CTTGGCACGGTGGCTGGAGGAGGCGAAGCTTTATTCCTCCCCCAACATGG
TCATATATGCGATTCAGCCGAGGAACACCCCCACTGCTGCCGGGATCCAA
GTCTCGCCAAGCATCATTCCAGGCGTTGAGTTCGGCGCGCGCTTGGTGCA
CATTGATGGAAAGGCGATCAAGCTCCAAATATGGGACACGGCGGGGCAGG
AATCTTTCCGCTCCATTACGCGATCCTACTACCGAGGGCGTGGGAAAATC
TTGCCTGCTCTTGCAGTTCACAGACCGGCGGTTTGTTCAAGTTCACGACC
TCACTATCGATGTCATGGTGCTGTCAAGCCAGCAGAAGGGGACTTGATAT
CGATGAATATACGACCTTTTTTTTTTCACTCCGCTTCCTTCCATTCTCGG
TACAGTCTGTGCCCGTACCAAACATGAGCTACGCCTACTTGTTCAAAAGC
ATCGTCATCGGAGATAGCGCGCCGCCGGGGCCCTCCTCGTTTACGATATC
ACACGTCGGGAGACTTTTAATCACTTGGCACGGTGGCTGGAGGAGGCGAA
GCTTTATTCCTCCCCCAACATGGTCATATATGCGATTCAGCCGAGGAACA
CCCCCACTGCTGCCGGGATCCAAGTCTCGCCAAGCATCATTCCAGGCGTT
GAGTTCGGCGCGCGCTTGGTGCACATTGATGGAAAGGCGATCAAGCTCCA
AATATGGGACACGGCGGGGCAGGAATCTTTCCGCTCCATTACGCGATCCT
ACTACCGAGGGCGTGGGAAAATCTTGCCTGCTCTTGCAGTTCACAGACCG
GCGGTTTGTTCAAGTTCACGACCTCACTATCGATGTCATGGTGCTGTCAA
GCCAGCAGAAGGGGACTTGATATCGATGAATATACGACCTTTTTTTTTTC
ACTCCGCTTCCTTCCATTCTCGGTACAGTCTGTGCCCGTACCAAACATGA
GCTACGCCTACTTGTTCAAAAGCATCGTCATCGGAGATAGCG
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Synonyms
Publications