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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101006g3.4581.mrna |
| Orig protein id | gnl|cribi|Naga_101006g3.4581 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:46758..48391 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7478 ID=rna7478|Name=rna7478|organism=Nannochloropsis gaditana|type=mRNA|length=267bp
ATGTGTAGAAAAGGTCGCGTGATACAGGGAGAGAAAAGCGCTAGCAAATG
TCATAGAGTGGTGGATCGTGCGTGGTATGCCCGGAGTCGGTGCGCGAGGA
GAGGGTCTAGAGAGAATGAGAAAAACGACTTCTTTTCATCCAGGTTGCAT
GCTGCGTGTATGTATTGGAATAGGTCAAAAGCCTCTGTCTCGTGGCGAAG
GACCAAGGTGCTCGTTTTGAGCAATGCGTCATGTGCGAGAGGACCACAGC
ACGTACGTCAATTTTGA back to topprotein sequence of rna7478 >rna7478-protein ID=rna7478-protein|Name=rna7478|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MPLSPSLATGSALSLSFFPLGCGLPSFPGLVPRQDSRMTSYFKQPALGAQ
RSTWMAEEEGGKEGECAVRDGKGGGEVVEVDVEEAGSPLMGGEGQGEGGK
KRRMKVEKENDGCVQKEKREGGEVNGLGAAFQRHTSAFHEVSQEEGAEIY
TKLIGWYIDHRRKLPWRGDPPPYDTEERKREGRRAGREGGRE back to topmRNA from alignment at CM002472.1:46758..48391+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7478 ID=rna7478|Name=rna7478|organism=Nannochloropsis gaditana|type=mRNA|length=1634bp|location=Sequence derived from alignment at CM002472.1:46758..48391+ (Nannochloropsis gaditana)
GGACACAATTTCGTACGAATTCATGCATGGCTCCGTGCAGACGTTGGTGC
TTTTCAGTGGGCAAGTGTAAACGAACACTAATGACGATTGAACCCAGCTT
GCATTGTGATGAAGCTTAATTGCTCTGTTCGACAGATCTACTTGCTACGT
TTCTTTCTCTAATAACCAACCTTGTCCAAACCTTTCAAAAATATAAACCC
CAGACAAGACAGTATCTCGGCATCAAATCACGGTACACGTACAACCTCGT
CGGGGGTGAACGCGACATCATCGCCCCCGAAAAAACTGGCAAGGCATTCC
TCTTGCAGCTGTCTAgtgccctttcttctccttgcgaCGATTTCCTTCCT
GATCGACCTTGGCAGTACCGTCCAATTTTTCACTACAATTCGTAGCATTA
TCCAATATCAACAAAATCAATTGCCAAGCTTTATATCTACTACATCGTTG
CAACCTTATCGGAGGCTATTGCGTGCCAGGCACGCGTTTGGCCGGCGCCC
CTCCTACCTTCCTCAATCAGGTATACATACGAGGGGAAATCGTAAGTTTT
GAAGCCTTCATTTAAAACCTGATATCAAATCTTGCATTTACATGCCTCTC
TCGCCATCCCTAGCGACGGGGTCGGCTTTGtcactttccttctttccttt
agGCTGCGgtcttccatcctttcctgGCCTGGTGCCCCGGCAGGATTCGC
GGATGACGTCATACTTCAAGCAGCCTGCGTTGGGAGCGCAGAGAAGCACG
tggatggcggaggaggagggagggaaggagggggaatgtgctgtgaggga
tggaaagggaggaggtgaggttgtggaggtggatgtggaggaagcggggt
cACCCTTGatggggggagaagggcaaggggagggagggaaaaagcgaagA
ATGAAGGTAGAAAAGGAGAATGATGGCTGCGtgcagaaggaaaagagaga
agggggagaagtcAACGGTTTGGGAGCGGCTTTTCAACGGCACACGAGTG
CCTTCCACGAGGTCTCCCAGGTaggaaggcgggcaggcAACAGGCGGGCG
GGATGACGACAGAGGgatcggaggagggagtggacggagaggagaggaat
gggagaaaaaaaggacgcttgggcaaggaggacggcgatgcAGAGAACGG
TAGATtcagcacctccctccctccctccctccctccctcccttcctccat
ccctccctccctccctccctccctcctacaggaagaaggcgccGAGATCT
ACACAAAACTAATCGGGTGGTACATCGATCACAGAAGAAAGTTGCCCTGG
CGCGgtgatcctcctccctacggtaggggagggaagggagggagggaggg
gaggaggaacagggaagaggaaggagaggaataGGCGAGACGATGGATGT
CGATTTCCGTACGAatgagagaaaaaaggaacatatatatatatatatat
acatagAAAGCTTGCGGCCATGCCTGACGTTGAAGAAACCTTAAAAGTCT
GATCTCCGTTCTTTTGaatctcctctctccctctctctcggcGTTTCCCC
CCCTGACCCTGGTCGATGTGGACACAGACACGGAAgagcggaagagggag
ggaaggcgagcggggagggagggagggagggagg back to topCoding sequence (CDS) from alignment at CM002472.1:46758..48391+ >rna7478 ID=rna7478|Name=rna7478|organism=Nannochloropsis gaditana|type=CDS|length=1731bp|location=Sequence derived from alignment at CM002472.1:46758..48391+ (Nannochloropsis gaditana)
ATGCCTCTCTCGCCATCCCTAGCGACGGGGTCGGCTTTGtcactttcctt
ctttcctttagGCTGCGgtcttccatcctttcctgGCCTGGTGCCCCGGC
AGGATTCGCGGATGACGTCATACTTCAAGCAGCCTGCGTTGGGAGCGCAG
AGAAGCACGtggatggcggaggaggagggagggaaggagggggaatgtgc
tgtgagggatggaaagggaggaggtgaggttgtggaggtggatgtggagg
aagcggggtcACCCTTGatggggggagaagggcaaggggagggagggaaa
aagcgaagAATGAAGGTAGAAAAGGAGAATGATGGCTGCGtgcagaagga
aaagagagaagggggagaagtcAACGGTTTGGGAGCGGCTTTTCAACGGC
ACACGAGTGCCTTCCACGAGGTCTCCCAGgaagaaggcgccGAGATCTAC
ACAAAACTAATCGGGTGGTACATCGATCACAGAAGAAAGTTGCCCTGGCG
CGgtgatcctcctccctacgACACGGAAgagcggaagagggagggaaggc
gagcggggagggagggagggagggaggATGCCTCTCTCGCCATCCCTAGC
GACGGGGTCGGCTTTGtcactttccttctttcctttagGCTGCGgtcttc
catcctttcctgGCCTGGTGCCCCGGCAGGATTCGCGGATGACGTCATAC
TTCAAGCAGCCTGCGTTGGGAGCGCAGAGAAGCACGtggatggcggagga
ggagggagggaaggagggggaatgtgctgtgagggatggaaagggaggag
gtgaggttgtggaggtggatgtggaggaagcggggtcACCCTTGatgggg
ggagaagggcaaggggagggagggaaaaagcgaagAATGAAGGTAGAAAA
GGAGAATGATGGCTGCGtgcagaaggaaaagagagaagggggagaagtcA
ACGGTTTGGGAGCGGCTTTTCAACGGCACACGAGTGCCTTCCACGAGGTC
TCCCAGgaagaaggcgccGAGATCTACACAAAACTAATCGGGTGGTACAT
CGATCACAGAAGAAAGTTGCCCTGGCGCGgtgatcctcctccctacgACA
CGGAAgagcggaagagggagggaaggcgagcggggagggagggagggagg
gaggATGCCTCTCTCGCCATCCCTAGCGACGGGGTCGGCTTTGtcacttt
ccttctttcctttagGCTGCGgtcttccatcctttcctgGCCTGGTGCCC
CGGCAGGATTCGCGGATGACGTCATACTTCAAGCAGCCTGCGTTGGGAGC
GCAGAGAAGCACGtggatggcggaggaggagggagggaaggagggggaat
gtgctgtgagggatggaaagggaggaggtgaggttgtggaggtggatgtg
gaggaagcggggtcACCCTTGatggggggagaagggcaaggggagggagg
gaaaaagcgaagAATGAAGGTAGAAAAGGAGAATGATGGCTGCGtgcaga
aggaaaagagagaagggggagaagtcAACGGTTTGGGAGCGGCTTTTCAA
CGGCACACGAGTGCCTTCCACGAGGTCTCCCAGgaagaaggcgccGAGAT
CTACACAAAACTAATCGGGTGGTACATCGATCACAGAAGAAAGTTGCCCT
GGCGCGgtgatcctcctccctacgACACGGAAgagcggaagagggaggga
aggcgagcggggagggagggagggagggagg back to top
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