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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102281g1.9481.mrna |
| Orig protein id | gnl|cribi|Naga_102281g1.9481 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:43105..43945 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7475 ID=rna7475|Name=rna7475|organism=Nannochloropsis gaditana|type=mRNA|length=534bp
ATGCGCGTTCGGTATAGCTCCGCGCTTCTCCTTGCCTTGAGCTTGGCAAG
CACCAGTTTCGCGGTTCCTCCCACGGAGGACGCAGCAACCTCAGCCACCG
CCAACGGCGCGGCCTCCGCCCTCCTGGGAGACCTACAGAACCCTATCGGA
GATCCCGGAGATGTCCTGGCCGGTATCATCCACGAAAATTGGGACAGCAT
CTTTAAAAAAGACTCTGGCGGAGTTAAGGGCCTCTTACACCGAAAACGAC
AGCTGCTGTCCGACTTAGGTTTGGAGGCAGCTGACGCAGACAGTCTCGAG
GTCGAGACCGGGGCGGGGACGGAGGGCGACTTGGAGGGAGGGGACGAGGA
GCAGGTCCTAGCCTACAGTCCAAAGCTACCCGGACGTGGGCAAAGCCTGA
TCCCAAGCCTGCGAAAAAGAAATCCTCTTCTTCCCTCTTCGGAAGGAAGT
CAGCCAGTACGCTTACGAACGGCGTGGAGAGTGCAGAGGCCTCTGGGCGC
ACCCAAGGCACCTGTGCTTGGCAGACCTACGTGA back to topprotein sequence of rna7475 >rna7475-protein ID=rna7475-protein|Name=rna7475|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MRPSLPPSPPASLPPSLQGYPNELALCPDKFNCPRRMNAVIIMRFYTSDP
DLPEANSKTDPLSANNPRLFGYEAPPTVEKRANNKWRERWKLIDTCDQSR
PTRFTNVCCPSLPPSLSPPSRSKKPHICLPASQPVCKLPSRIAPVQALFH
PP back to topmRNA from alignment at CM002472.1:43105..43945+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7475 ID=rna7475|Name=rna7475|organism=Nannochloropsis gaditana|type=mRNA|length=841bp|location=Sequence derived from alignment at CM002472.1:43105..43945+ (Nannochloropsis gaditana)
gagaccgTGCGCCTGATGTTTGGTGACCGAGAATCACTGCTTTCCTCATG
GCATCGATTTCGTCatgcgtccttccctccctccttcccccccggcctcc
ctcccgccctccctccagggcTACCCCAACGAGCTGGCTTTGTGCCCCGA
CAAGTTCAACTGCCCGCGCCGGATGAACGCGGTGATCATCATGCGCTTCT
ACACCTCCGACCCGGACCTGCCGGAGGCCAACAGCAAGACCGATCCCTTG
AGCGCGAACAATCCCCGATTGTTTGGTTATGAGGtaggcaggggggggga
agggatcCATcacaaagggggggagggatccaACCCTTTgttattttttt
cccttcttttttccaagaaaaggggcggaggagcatgTATATGATATTCT
ATTACGCGATATTGTCATGGATATAAATATACCGCGCCCATCGTCTCAAC
CGAATCGACCTGCGCACACCACCCTcgggctcccccccctcccttgtcag
GCGCCCCCGACCGTCGAGAAACGGGCGAACAACAAATGGCGCGAACGCTG
GAAGCTCATCGACACCTGCGACCAGTCCAGACCTACCCGGTTCACGAATG
TAtgttgcccctccctccctccctccctctctccccccagCCGATCGAAG
AAACCCCACATCTGTTTACCTGCCTCCCAACCTGTATGCAAGCTGCCCTC
TCGTATCGCTCCCGTGCAAGCCCTCTTTCATCCCCCTTAACCCCCCATGC
CTTCTCTGCATGCCGTTATACGAGTCGGCAAAGGAAGGCCATAAATTCCC
AGCGGAATCCACATGCAAGCTGCGTCCCCTAACCCTCCCTC back to topCoding sequence (CDS) from alignment at CM002472.1:43105..43945+ >rna7475 ID=rna7475|Name=rna7475|organism=Nannochloropsis gaditana|type=CDS|length=918bp|location=Sequence derived from alignment at CM002472.1:43105..43945+ (Nannochloropsis gaditana)
atgcgtccttccctccctccttcccccccggcctccctcccgccctccct
ccagggcTACCCCAACGAGCTGGCTTTGTGCCCCGACAAGTTCAACTGCC
CGCGCCGGATGAACGCGGTGATCATCATGCGCTTCTACACCTCCGACCCG
GACCTGCCGGAGGCCAACAGCAAGACCGATCCCTTGAGCGCGAACAATCC
CCGATTGTTTGGTTATGAGGCGCCCCCGACCGTCGAGAAACGGGCGAACA
ACAAATGGCGCGAACGCTGGAAGCTCATCGACACCTGCGACCAGTCCAGA
CCTACCCGGTTCACGAATGTAtgttgcccctccctccctccctccctctc
tccccccagCCGATCGAAGAAACCCCACATCTGTTTACCTGCCTCCCAAC
CTGTATGCAAGCTGCCCTCTCGTATCGCTCCCGTGCAAGCCCTCTTTCAT
CCCCCTTAAatgcgtccttccctccctccttcccccccggcctccctccc
gccctccctccagggcTACCCCAACGAGCTGGCTTTGTGCCCCGACAAGT
TCAACTGCCCGCGCCGGATGAACGCGGTGATCATCATGCGCTTCTACACC
TCCGACCCGGACCTGCCGGAGGCCAACAGCAAGACCGATCCCTTGAGCGC
GAACAATCCCCGATTGTTTGGTTATGAGGCGCCCCCGACCGTCGAGAAAC
GGGCGAACAACAAATGGCGCGAACGCTGGAAGCTCATCGACACCTGCGAC
CAGTCCAGACCTACCCGGTTCACGAATGTAtgttgcccctccctccctcc
ctccctctctccccccagCCGATCGAAGAAACCCCACATCTGTTTACCTG
CCTCCCAACCTGTATGCAAGCTGCCCTCTCGTATCGCTCCCGTGCAAGCC
CTCTTTCATCCCCCTTAA back to top
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