EWM23216.1, cds7457 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23216.1 vs. NCBI_GenBank
Match: gi|585104143|gb|EWM23216.1| (hypothetical protein Naga_102281g1 [Nannochloropsis gaditana]) HSP 1 Score: 303.138 bits (775), Expect = 4.225e-104 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MRPSLPPSPPASLPPSLQGYPNELALCPDKFNCPRRMNAVIIMRFYTSDPDLPEANSKTDPLSANNPRLFGYEAPPTVEKRANNKWRERWKLIDTCDQSRPTRFTNVCCPSLPPSLSPPSRSKKPHICLPASQPVCKLPSRIAPVQALFHPP 152
MRPSLPPSPPASLPPSLQGYPNELALCPDKFNCPRRMNAVIIMRFYTSDPDLPEANSKTDPLSANNPRLFGYEAPPTVEKRANNKWRERWKLIDTCDQSRPTRFTNVCCPSLPPSLSPPSRSKKPHICLPASQPVCKLPSRIAPVQALFHPP
Sbjct: 1 MRPSLPPSPPASLPPSLQGYPNELALCPDKFNCPRRMNAVIIMRFYTSDPDLPEANSKTDPLSANNPRLFGYEAPPTVEKRANNKWRERWKLIDTCDQSRPTRFTNVCCPSLPPSLSPPSRSKKPHICLPASQPVCKLPSRIAPVQALFHPP 152
BLAST of EWM23216.1 vs. NCBI_GenBank
Match: gi|553192721|ref|XP_005855631.1| (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >gi|422293420|gb|EKU20720.1| hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 95.1301 bits (235), Expect = 5.524e-20 Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 14 PPSLQGYPNELALCPDKF---NCPRRMNAVIIMRFYTSDPDLPEANSKTD-PLSANNPRLFGYEAPPTVEKRANNKW-----RERWKLIDTCDQSRPTRFTNVCCP---SLPPSLSPPSRSKK 124
P QG NEL+LCP+ C R +NAV++MRFYTSDPD P +SKTD P S N RLFGY PP VE+R W R+RW++ TCDQ+R T+ T++ + P +PP R K
Sbjct: 234 PRGDQGLKNELSLCPESMTDRQC-RSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFAPPVRHNK 355
BLAST of EWM23216.1 vs. NCBI_GenBank
Match: gi|585112738|gb|EWM30096.1| (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana]) HSP 1 Score: 94.7449 bits (234), Expect = 6.010e-20 Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 14 PPSLQGYPNELALCPDKF---NCPRRMNAVIIMRFYTSDPDLPEANSKTD-PLSANNPRLFGYEAPPTVEKRANNKW-----RERWKLIDTCDQSRPTRFTNVCCP---SLPPSLSPPSRSKK 124
P QG NEL+LCP+ C R +NAV++MRFYTSDPD P +SKTD P S N RLFGY PP VE+R W R+RW++ TCDQ+R T+ T++ + P +PP R K
Sbjct: 74 PRGDQGLKNELSLCPESMTDRQC-RSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFAPPVRHNK 195 The following BLAST results are available for this feature:
BLAST of EWM23216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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