rna7470, rna7470 (mRNA) Nannochloropsis gaditana

Overview
Namerna7470
Unique Namerna7470
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length621
Alignment locationCM002472.1:30485..31027 -

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Properties
Property NameValue
ProductaarF domain-containing protein kinase
Orig transcript idgnl|cribi|Naga_102068g1.8446.mrna
Orig protein idgnl|cribi|Naga_102068g1.8446
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:30485..31027 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102068g1gene7230Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7470rna7470-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23221.1cds7452Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7470 ID=rna7470|Name=rna7470|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
TCTCAGACCCTGAACCTAAGTGCAGGCGTCTGCGGCGCCATGGACCCTCG
CCCCGTCTCCGAGCACACCCTCTTCCCCATCTACGACCTCGGTAATGTCT
TGACTGCCCTCCTCCTCCACGTTCACGTTCGAGAGGGGATGGCTTCCAAG
GGGTATGAGACGCCGTTGAAATCCTTGCTACCGGCGACATTGGCGGGGTA
CATATCGGAAAACGTGCGGTTGAAGCATTTCTTGTCGTACGCCACCGGAT
TGCCGACGGCCCTCCCTCCCTCCCTCCCTGCGTCCACCCTCCTCGACCAC
GATGCCTGTCTGGACCTACTTGCTACCACCTTTGCCTCCATCCCTCCCCT
TCGCCCCCCTGGTCGTCAGGCGTCCTTCTCCCTCCTGGATTTCGGTCATC
TGGCCACTGCCCTCTTGCACGAGAGCTGTCACCTCCCGCCGTCCTCGCTT
CCCCAAGTTTTCGCCGAAAAAATTCTGAAACCGTTACATTTAACGGGCGG
GGCTTTCCTAGGAGGCTTTGATCAAGGCGTTAACGGCAAAAGCAGGTACG
CACAGATGGATCATTGGCCGTCGTCCACAACGGATTTGCGGCACAGCTCC
GCCCGCTACTCTCCCTGGTAG
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protein sequence of rna7470

>rna7470-protein ID=rna7470-protein|Name=rna7470|organism=Nannochloropsis gaditana|type=polypeptide|length=96bp
MNNDMQAAVKIFRFVARLNSDFELLLHIMKSWAEEIEKELDFRVEASNLE
RVRENVVVRGGLDVVVPQPVEGREGGREGGREGQQVGGSLARPQEC
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mRNA from alignment at CM002472.1:30485..31027-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7470 ID=rna7470|Name=rna7470|organism=Nannochloropsis gaditana|type=mRNA|length=543bp|location=Sequence derived from alignment at CM002472.1:30485..31027- (Nannochloropsis gaditana)
CAGGTTCAGCACCAGGGTATCGAGGCCCTCATGAACAACGATATGCAAGC
AGCCGTTAAAATTTTCCGTTTCGTCGCCCGTTTGAATTCAGATTTTGAAC
TGCTCTTGCACATTATGAAGTAGGCGAGGAAGGGAGGATCGAGAGAGGGA
GGGAGGGAGGGAGGGAGGGGAGGTTTGATACGGATTTGCATCCTGAAAGC
AATGTGAGGGCGATAGAACCCCTCCTTCCCTTCTTCCTTTCCTACGCGCT
GGGATCCTTGTGGACCGAGCTGGCATTAATTATCCCTCACTGCCTCCCTC
CTACCCGCCCTCCCTCCCTCCTGCCCTTCCTCCCCCCTAAGATCCTGGGC
GGAGGAGATTGAGAAGGAGCTGGACTTCCGCGTGGAGGCCTCAAATTTGG
AGCGAGTGAGGGAGAATGTGGTGGTCCGAGGTGGTTTAGATGTGGTCGTG
CCGCAGCCGGTGGAAGGTAGGGAGGGAGGAAGGGAGGGAGGGAGGGAAGG
ACAGCAAGTTGGAGGATCGCTTGCTCGTCCTCAAGAGTGCTAG
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Coding sequence (CDS) from alignment at CM002472.1:30485..31027-

>rna7470 ID=rna7470|Name=rna7470|organism=Nannochloropsis gaditana|type=CDS|length=582bp|location=Sequence derived from alignment at CM002472.1:30485..31027- (Nannochloropsis gaditana)
ATCCTGGGCGGAGGAGATTGAGAAGGAGCTGGACTTCCGCGTGGAGGCCT
CAAATTTGGAGCGAGTGAGGGAGAATGTGGTGGTCCGAGGTGGTTTAGAT
GTGGTCGTGCCGCAGCCGGTGGAAGGTAGGGAGGGAGGAAGGGAGGGAGG
GAGGGAAGGACAGCAAGTTGGAGGATCGCTTGCTCGTCCTCAAGAGTGCT
AGATGAACAACGATATGCAAGCAGCCGTTAAAATTTTCCGTTTCGTCGCC
CGTTTGAATTCAGATTTTGAACTGCTCTTGCACATTATGAAATCCTGGGC
GGAGGAGATTGAGAAGGAGCTGGACTTCCGCGTGGAGGCCTCAAATTTGG
AGCGAGTGAGGGAGAATGTGGTGGTCCGAGGTGGTTTAGATGTGGTCGTG
CCGCAGCCGGTGGAAGGTAGGGAGGGAGGAAGGGAGGGAGGGAGGGAAGG
ACAGCAAGTTGGAGGATCGCTTGCTCGTCCTCAAGAGTGCTAGATGAACA
ACGATATGCAAGCAGCCGTTAAAATTTTCCGTTTCGTCGCCCGTTTGAAT
TCAGATTTTGAACTGCTCTTGCACATTATGAA
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Synonyms
Publications