EWM23221.1, cds7452 (CDS) Nannochloropsis gaditana

Overview
NameEWM23221.1
Unique Namecds7452
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:30909..30997 -
Alignment locationCM002472.1:30485..30686 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23221.1
ProductaarF domain-containing protein kinase
Orig transcript idgnl|cribi|Naga_102068g1.8446.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:30909..30997 -
CM002472.1supercontigCM002472.1:30485..30686 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR004147UbiB_dom
Homology
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BLAST of EWM23221.1 vs. NCBI_GenBank
Match: gi|585104154|gb|EWM23221.1| (aarF domain-containing protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 192.2 bits (487), Expect = 5.590e-62
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 MNNDMQAAVKIFRFVARLNSDFELLLHIMKSWAEEIEKELDFRVEASNLERVRENVVVRGGLDVVVPQPVEGREGGREGGREGQQVGGSLARPQEC 96
            MNNDMQAAVKIFRFVARLNSDFELLLHIMKSWAEEIEKELDFRVEASNLERVRENVVVRGGLDVVVPQPVEGREGGREGGREGQQVGGSLARPQEC
Sbjct:    1 MNNDMQAAVKIFRFVARLNSDFELLLHIMKSWAEEIEKELDFRVEASNLERVRENVVVRGGLDVVVPQPVEGREGGREGGREGQQVGGSLARPQEC 96
The following BLAST results are available for this feature:
BLAST of EWM23221.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104154|gb|EWM23221.1|5.590e-62100.00aarF domain-containing protein kinase [Nannochloro... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7470rna7470Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications