rna7455, rna7455 (mRNA) Nannochloropsis gaditana

Overview
Namerna7455
Unique Namerna7455
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1646
Alignment locationCM002471.1:637801..639201 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100856g1.10105.mrna
Orig protein idgnl|cribi|Naga_100856g1.10105
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:637801..639201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100856g1gene7213Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23236.1cds7437Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7455rna7455-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7455 ID=rna7455|Name=rna7455|organism=Nannochloropsis gaditana|type=mRNA|length=1646bp
GCTTCACGGCGCTTCCTCCCTCCTTCGCCGTGTCCTCCTTTTTCTCCCTC
CCGCCCTCCCACCGCCCCTTCTCTGTCCACAGCCACCCTCCGGAGCCAGG
ACCCTGTCACGAGGGGACAGGGGGGGGAAAAGAGCAGCGACCAGATCCCT
CGAAAGGGCAGATGGCGCAAATGTCAGCATCACTCAAATCGGAAGCGGTA
CCAGTGCCTTCTCAACCACCACCACCGCCCCCATTACCCATACATTATGG
AAGAACAGAGCAGCAACCACACATGCGACCCAAACCATGCCATCATCGAA
CACCTTCACCACCGCACGCCCTACCACACCACCCTGACCCGCACTTACCG
CAGCCGCATCAACAGCAGCGACCTCTCCCGCGATGGGAGCAATCCCTGGC
AAGTCTTGGGCATGACCCCAGCTTCTCGCAACCGCAAGCGAGCGAATTGC
TGCACCGAGCGGTCATCGAACCTACCCAACGCTCCACCGCGATCGCGACC
ATCCATTACTCGATGGCGGGTCCTCTCCCTCCCTCCCTCCCTCCGACCCT
CCCTCTCTCCACCCCTTCCTCTGGCCCGGCCTATCCCCACCGCGTGCACC
AGCAACCTTGGAACTCGTCGTCTTTCCTGCAACGAGATCATTCCCACGCC
CACAGCTCCCGCGGGGAAGCCCAGCCCCAGCGACTGCACCCCCCAGGCGC
CTTCCAAACACAGCAGCCGCTGCCACCGCCACATCCGTCGCACACAGCAG
CGGCGTCCGGGGGGCCGGTTCGGCCCGTATCCACCCCTGGCCACGCCGAG
TGGCAACACGTCGACCCCTCCTGGTTGAAGCCCGACCCCGCCTCGTCCCC
CCCTTCCACCGCCGCCTCCTCCCTCTTCCCTTCCCTCTCCCTCCTCCCAC
CGCCGTACCACCAGGCGAACCATCCTCGTGCCGGTGCTGGGACGCCCGGA
GAAAGGGGTGCTGGCGACAAGGCGGATACCTACAGCTTTGGGGAGGAGAG
CTTCCAGGATTTCCAATCGCCCGACGCTCCTTTCGAGGCCTTTTCCTTCC
CTGGGAATGCCAAAGGCGGAGGAGACGATGAAACGAAGGGCCCGAATGCC
TCCACGGCCGAATGGTCGTCTCGGAGCAAGAAATTGACGGAGGTTCCCTC
CCTAGTCCTCCAGGCATTGGACCAGAAACTGTCTCAGGTCCCGGCCTGGG
ACGAACGGATCACTAAGGAGAAGCTGGAGCAACTCGGTGGGGTGGTCATG
GTCGATTCCTCCCCGGTCCTTTCCTCGGCTGTTCGGAATGATGCGATCCA
TAAATACGCGCCGAAGGACTTCCACATCAAGTGCCAATTCTGCCTCAAAT
CCTTCAACGGCAAAAACGCCCTTCGCAATTTTGAACTACACGCGATTTTT
TGGGAACTCTACCTCGCCCATCCCGCCCTCCTTCTTCCCTCTACTCAGGC
TGATTCGAAGGTCGAAAAGGAGCATGGTGGGCTGTATCCGTGCAACAGCA
TCGCCCGGGACGTCGTCGTTTACATGGAGAGCAGGAAACCTGTTTTGTGC
AACAACCAGAGGAAAGTCTGGAAGCTGCAGGGGGAGCTCTTCCACGACAC
CAACCCCTTCCAGGGCCGGGCCTGGCTCCAAATTCCCAACGGATAG
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protein sequence of rna7455

>rna7455-protein ID=rna7455-protein|Name=rna7455|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MLQSDFFVLPFLLPLPPSLPLLPCLKQLEFGSNASLRATASSLLPPRPQY
PRPFSVFPYLYRTPGVLPAPSTSWTVGGSPRREGNRRRWRRKRRKERREH
GVGPGGEEGRGSGGRNVSRAEERRRGGGKHRGGASMLAEETGRGRRGGGE
EAKEGGKWGGRGGKGGLAGRAGSGKRGEASA
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mRNA from alignment at CM002471.1:637801..639201-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7455 ID=rna7455|Name=rna7455|organism=Nannochloropsis gaditana|type=mRNA|length=1401bp|location=Sequence derived from alignment at CM002471.1:637801..639201- (Nannochloropsis gaditana)
ATCCAAGTACTTGCCAAGTCGGCAACGCGGGTTCCGAGACTGTTCTCGTG
CGTGAAGTTGCAGGTACGAACGATCAAAGAACTGAGAAATGAAAAGGGGT
GGGAAAAAATAAGTCAGGGAAGGCAAAGAGGGTGCAACGGGTCGCGTGTC
GGATGTCTCCGAGGACGACATAGCATGAGGGCGGTTTCACGAGTGTAGGT
GTCTCGACGCTGTTGCGACATTGGTTACCCTGGAGGCAATAGACCTTTCG
TGGGAGCGTCACCTAAAACGTAGATATTCTTGCCCTGATATTTCCGGCAC
GTGACGGCTTGATTCGCGCGCATGTGTTTTCTGTTCTCTTCGAATCTGGA
TGACTGGCGGGGGAAGAGACGCCTGCGCGTGGCGTGTCTCACGTCTCGCA
CCATCCTCACCGCAAGCATATCAGAGGACATGCTGTAACACCCTTGTCCT
CCCCTTGTCTCTGCCTCTCCCAATGACACGGCGTCCATTCCCACACAACC
CCCGGTCATCGTCTCTACTTGACACAGGTCGGATTTGCCAGGAGAGACAT
AGCCGTGCACGCACCGCCCTCCCTTTGGCGGCACCCAGCCATAGGGCCTC
GTCCAGGGAGCAATTGCAGCATTGAGGTGATTGGGAGGAGGGCCGTTCTT
TGAAATTGCGCATGTGCCTGCCCGACGGCCCATGTCTGTATACCTCCAAG
GCCAACAAGTGCGAGAGGTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGGAGGAGGCGTGTGTCCTCCAAAAAGAGGTCGAGAGAATGGC
ACGCTGGTCCATGTGCCGCGCCACAACCCTCGCACGGCGTCAGCTGTATG
CTTCAATCTGACTTCTTTGTCCTCCCTTTTCTCCTTCCCCTTCCTCCTTC
CCTTCCCCTCCTTCCCTGCCTCAAGCAGCTCGAGTTCGGGTCGAACGCTT
CCCTGCGAGCCACTGCCTCCTCCCTCCTCCCCCCGCGGCCCCAGTACCCT
CGCCCTTTCTCCGTCTTCCCCTACCTATATCGAACCCCTGGTGTCCTTCC
CGCCCCTTCAACGTCCTGGACCGTGGGTGGCTCCCCACGACGGGAGGGGA
ATAGAAGACGATGGAGGAGAAAGAGAAGGAAAGAGCGACGAGAGCACGGC
GTGGGCCCAGGGGGGGAGGAAGGGCGGGGATCGGGCGGAAGGAACGTTTC
GAGGGCGGAGGAGCGCCGGAGAGGGGGGGGGAAGCACCGAGGCGGTGCTT
CCATGCTCGCTGAGGAGACCGGAAGGGGTAGACGGGGTGGTGGTGAAGAA
GCAAAGGAGGGAGGGAAGTGGGGAGGTAGAGGAGGAAAAGGGGGGTTGGC
GGGGAGGGCGGGAAGCGGCAAGCGGGGAGAAGCAAGCGCTTGAGGAGGAG
T
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Coding sequence (CDS) from alignment at CM002471.1:637801..639201-

>rna7455 ID=rna7455|Name=rna7455|organism=Nannochloropsis gaditana|type=CDS|length=546bp|location=Sequence derived from alignment at CM002471.1:637801..639201- (Nannochloropsis gaditana)
ATGCTTCAATCTGACTTCTTTGTCCTCCCTTTTCTCCTTCCCCTTCCTCC
TTCCCTTCCCCTCCTTCCCTGCCTCAAGCAGCTCGAGTTCGGGTCGAACG
CTTCCCTGCGAGCCACTGCCTCCTCCCTCCTCCCCCCGCGGCCCCAGTAC
CCTCGCCCTTTCTCCGTCTTCCCCTACCTATATCGAACCCCTGGTGTCCT
TCCCGCCCCTTCAACGTCCTGGACCGTGGGTGGCTCCCCACGACGGGAGG
GGAATAGAAGACGATGGAGGAGAAAGAGAAGGAAAGAGCGACGAGAGCAC
GGCGTGGGCCCAGGGGGGGAGGAAGGGCGGGGATCGGGCGGAAGGAACGT
TTCGAGGGCGGAGGAGCGCCGGAGAGGGGGGGGGAAGCACCGAGGCGGTG
CTTCCATGCTCGCTGAGGAGACCGGAAGGGGTAGACGGGGTGGTGGTGAA
GAAGCAAAGGAGGGAGGGAAGTGGGGAGGTAGAGGAGGAAAAGGGGGGTT
GGCGGGGAGGGCGGGAAGCGGCAAGCGGGGAGAAGCAAGCGCTTGA
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Synonyms
Publications