EWM23236.1, cds7437 (CDS) Nannochloropsis gaditana

Overview
NameEWM23236.1
Unique Namecds7437
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:637809..638354 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23236.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100856g1.10105.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:637809..638354 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23236.1 vs. NCBI_GenBank
Match: gi|585104185|gb|EWM23236.1| (hypothetical protein Naga_100856g1 [Nannochloropsis gaditana])

HSP 1 Score: 342.428 bits (877), Expect = 8.218e-119
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MLQSDFFVLPFLLPLPPSLPLLPCLKQLEFGSNASLRATASSLLPPRPQYPRPFSVFPYLYRTPGVLPAPSTSWTVGGSPRREGNRRRWRRKRRKERREHGVGPGGEEGRGSGGRNVSRAEERRRGGGKHRGGASMLAEETGRGRRGGGEEAKEGGKWGGRGGKGGLAGRAGSGKRGEASA 181
            MLQSDFFVLPFLLPLPPSLPLLPCLKQLEFGSNASLRATASSLLPPRPQYPRPFSVFPYLYRTPGVLPAPSTSWTVGGSPRREGNRRRWRRKRRKERREHGVGPGGEEGRGSGGRNVSRAEERRRGGGKHRGGASMLAEETGRGRRGGGEEAKEGGKWGGRGGKGGLAGRAGSGKRGEASA
Sbjct:    1 MLQSDFFVLPFLLPLPPSLPLLPCLKQLEFGSNASLRATASSLLPPRPQYPRPFSVFPYLYRTPGVLPAPSTSWTVGGSPRREGNRRRWRRKRRKERREHGVGPGGEEGRGSGGRNVSRAEERRRGGGKHRGGASMLAEETGRGRRGGGEEAKEGGKWGGRGGKGGLAGRAGSGKRGEASA 181
The following BLAST results are available for this feature:
BLAST of EWM23236.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104185|gb|EWM23236.1|8.218e-119100.00hypothetical protein Naga_100856g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7455rna7455Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications