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Properties
| Property Name | Value |
|---|
| Product | tf1-like protein |
| Orig transcript id | gnl|cribi|Naga_100035g2.3384.mrna |
| Orig protein id | gnl|cribi|Naga_100035g2.3384 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:318193..318804 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna745 ID=rna745|Name=rna745|organism=Nannochloropsis gaditana|type=mRNA|length=953bp
AGGAGGAGGAGGCCCCCAAGACCCAGAGGATGAAGGAAGAGGTGTTGAGC
CTGAAGGAGTATTTGAAAAAGCACGAGCGTGAGTCCCCGCCCCCGCCGGC
CGTCCGTCCCGATCCTCACCTGGTCAGTGCTCTGGTCCGGGAGCTGGGGG
TCCCCGGCCTGGAGGAGGCGGTGAACAGCTTGGCCGTGCAATTGAACTTC
GATTGGGCCCGTACCTGCAGGTATGCCTTTGCGGCGTACTTGTTCGCGCG
CTTTGGCGCACAAGGTGTGTGGAAGCCCTTGCTATACAGCATGGTCCCGG
GTGTCTTTTTTTTGCAACTGCGGCCGTTTCGATACGGTGCCAAAGCGGTG
TGGGAGATGCTGGCGGTCTCGCCATGGATTGGAGGCTTCTCCTCTGCCTT
GCTCTCAGCACCACAGCAAGTCTTGTTGACGTTCGATGAGCAGGCGTACC
TGGAAAGACTTTACGGACAGGAAGGTGGCATGGTTCCCCCGGCCGTGGGT
CCCTTCTTGTCTCCCCCTGAACAGGGACAGGGGCGTGAGCAAGGGGGAGA
AAAGGGCCTGGGTGAAGAAGCAGGAGGAAGTGAAGAGGAGGAGCAGGACG
GGGAGGAGGGAGTGGTGGAAGAAGGAGGGGAGGAGGATGAGCTGGAGACA
CTAGAGGACCCGTTTGATGATGAGGAGGGAGGGAAAGATGAAGTGGTTGG
AGGAGAGGAGGGGGGGGAGGAGCGGGAAGGTCAGATAAGGGAGGAAGAGG
AGAGAGAGGGAGAGGAGGAGGACGTGGAAGAGGGGGAGGAGGGGGAGGAG
GGGCAGGAGGAGGGGGAGGAAGAAGAGGAGGAAGAAGAGGAGGAGGAAGA
GGAGGAAGAGGAGGAGGATGATTTTTATGAGGCAGCGGACGAAATTCCCG
GAGGGGAGGACTTTGCTGACGAGGGAGAGGAGGAAAATGAAGATGACGAC
TAG back to topprotein sequence of rna745 >rna745-protein ID=rna745-protein|Name=rna745|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MIRSSPPFLLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDV
IDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLF
MSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGT
HRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFFKAAH
QSK back to topmRNA from alignment at CM002456.1:318193..318804+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna745 ID=rna745|Name=rna745|organism=Nannochloropsis gaditana|type=mRNA|length=612bp|location=Sequence derived from alignment at CM002456.1:318193..318804+ (Nannochloropsis gaditana)
ATGATCCggtcttcacctccctttTTGCTGACCTTTGCATTCCTGTCCGT
CGCCTCGATATTGCAGCCTCCGCATCGCTTCGGCGCCGTTGCCCAGATGA
CCAAGCACCACGCCGCCAACCTACGAGACGCTGGAGTCATTCCTGACGTC
ATTGACAATTTTGATCCTCAAGTTCAGATTCGAATCACGTACGATTCCCT
CCTGATCACCCCCGGCGCCaccatccttcctcgccaGGGAGTGCACATGC
CTCAAGTAACCTTGGAGGGCTCACAGCCCGGGCACCTCTATACTCTCTTC
ATGTCGGACCCTGACGCCCCATCTCCAGAGCACCCATCACACCGGGAATA
CCTGCACTGGATCGTGAGCAACATCCCCGGGGGAGCCAACGACATTGCCG
AGGGGACGGAGGTCGTGCCGTACGCCCCTCCTACACCTCCTCAGGGCACC
CATCGCTACGTCCTCACGGTCATGGAGCAGCCTGGCACCAACCCCATGAC
AGTGAGGCCGCCTGCTCAGCGCGGTGGCTTTCGAACGCGGACGTttggga
aagaggcagggatggaCGTGGTGGGTGCCACGTTCTTTAAGGCGGCGCAC
CAGTCAAAGTag back to topCoding sequence (CDS) from alignment at CM002456.1:318193..318804+ >rna745 ID=rna745|Name=rna745|organism=Nannochloropsis gaditana|type=CDS|length=612bp|location=Sequence derived from alignment at CM002456.1:318193..318804+ (Nannochloropsis gaditana)
ATGATCCggtcttcacctccctttTTGCTGACCTTTGCATTCCTGTCCGT
CGCCTCGATATTGCAGCCTCCGCATCGCTTCGGCGCCGTTGCCCAGATGA
CCAAGCACCACGCCGCCAACCTACGAGACGCTGGAGTCATTCCTGACGTC
ATTGACAATTTTGATCCTCAAGTTCAGATTCGAATCACGTACGATTCCCT
CCTGATCACCCCCGGCGCCaccatccttcctcgccaGGGAGTGCACATGC
CTCAAGTAACCTTGGAGGGCTCACAGCCCGGGCACCTCTATACTCTCTTC
ATGTCGGACCCTGACGCCCCATCTCCAGAGCACCCATCACACCGGGAATA
CCTGCACTGGATCGTGAGCAACATCCCCGGGGGAGCCAACGACATTGCCG
AGGGGACGGAGGTCGTGCCGTACGCCCCTCCTACACCTCCTCAGGGCACC
CATCGCTACGTCCTCACGGTCATGGAGCAGCCTGGCACCAACCCCATGAC
AGTGAGGCCGCCTGCTCAGCGCGGTGGCTTTCGAACGCGGACGTttggga
aagaggcagggatggaCGTGGTGGGTGCCACGTTCTTTAAGGCGGCGCAC
CAGTCAAAGTag back to top
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