EWM29920.1, cds745 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|585112503|gb|EWM29920.1| (tf1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 414.461 bits (1064), Expect = 1.391e-146 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query: 1 MIRSSPPFLLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFFKAAHQSK 203
MIRSSPPFLLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFFKAAHQSK
Sbjct: 1 MIRSSPPFLLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDVVGATFFKAAHQSK 203
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|168033265|ref|XP_001769136.1| (predicted protein [Physcomitrella patens] >gi|162679562|gb|EDQ66008.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 136.732 bits (343), Expect = 2.366e-37 Identity = 69/158 (43.67%), Postives = 93/158 (58.86%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQ-PGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DVID F P V + + Y S ++ G + P P V + G+ + +TL M+DPDAPSP PS RE++HWIV++IPG ++ G EVVPY P PP G HRY+ + +QP P+ V P+ R F TRTF E G+ V AT+F AA +
Sbjct: 13 VIGDVIDMFAPSVDMAVVYTSRKVSNGCQMKPSATNEAPTVHVTGNNGDNNFFTLIMTDPDAPSPSEPSLREWVHWIVTDIPGNSSTTTSGKEVVPYVGPCPPIGIHRYIFVLFKQPTGKPLLVTAPSVRNNFNTRTFAVEHGLGFPVAATYFNAAKE 170
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|1047209949|dbj|BAV32137.1| (MOTHER OF FT AND TFL1 [Symplocarpus renifolius]) HSP 1 Score: 137.502 bits (345), Expect = 3.127e-37 Identity = 84/196 (42.86%), Postives = 107/196 (54.59%), Query Frame = 0
Query: 9 LLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEG--SQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
+L AF S+ S+L P VA + L A VIPDVID F P ++ Y + G I P + P V + G +LYTL M+DPDAPSP +PS RE+LHWIV +IPG N A+G E+VPY P PP G HRYV V +Q T VRPP RG F+TR F + G+ + V A +F A +
Sbjct: 20 VLVSAFASL-SLLLP------VATSRRSQLDALVAARVIPDVIDAFSPAAEVSARYGRRDVVDGCDIKPSESASRPAVWIRGRGCSGDNLYTLIMTDPDAPSPSNPSEREWLHWIVVDIPGECN-AAKGKELVPYMGPEPPIGIHRYVFVVFKQNKTL-GEVRPPLGRGHFKTRGFAAQNGLGLPVAALYFNATKE 206
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|1137184742|gb|OMO59963.1| (Phosphatidylethanolamine-binding protein PEBP [Corchorus capsularis]) HSP 1 Score: 135.961 bits (341), Expect = 4.154e-37 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DV+D F P V + I Y S +T G + P ++ P+V+++G P HLYTL M+DPDAPSP PS RE++HWIV +IPGG N +G E++PY P PP G HRY+ + +Q G V+PPA R F TR F + + V +F A +
Sbjct: 13 VIGDVVDMFVPSVTMSIYYASKHVTNGCDVKPSMAINPPKVSIDG-HPDHLYTLVMTDPDAPSPSEPSMREWVHWIVCDIPGGTNP-TQGKEILPYMGPRPPVGIHRYIFVLFQQNGPMGTAVQPPASRANFNTRLFADHLNLGLPVATVYFNAQKE 167
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|1137231847|gb|OMO94933.1| (Phosphatidylethanolamine-binding protein PEBP [Corchorus olitorius]) HSP 1 Score: 135.576 bits (340), Expect = 6.070e-37 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DV+D F P V + I Y S +T G + P ++ P+V+++G P HLYTL M+DPDAPSP PS RE++HWIV +IPGG N +G E++PY P PP G HRY+ + +Q G V+PPA R F TR F + + V +F A +
Sbjct: 13 VIGDVVDMFVPTVTMSIYYASKHVTNGCDVKPSMAINPPKVSIDG-HPDHLYTLVMTDPDAPSPSEPSMREWVHWIVCDIPGGTNP-TQGKEILPYMGPRPPVGIHRYIFVLFQQNGPMGTAVQPPASRANFNTRLFADHLNLGLPVATVYFNAQKE 167
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|1026027511|ref|XP_016560013.1| (PREDICTED: protein MOTHER of FT and TFL1-like [Capsicum annuum]) HSP 1 Score: 134.42 bits (337), Expect = 2.768e-36 Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGS-QPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DVID F P V+ + YDS I+ G I P H P + ++GS +LYTL M+DPDAPSP P+ RE+LHWIV+++P G D +EG EVV Y P PP G HRYV T+ Q + + +PP R F+TR F + G+ + V A +F + +
Sbjct: 19 VIGDVIDLFVPAVEFTVEYDSKQISNGVEITPAAAAHKPTLHIKGSPDSNNLYTLVMADPDAPSPSEPTFREWLHWIVTDVPEGG-DASEGREVVEYMGPKPPAGIHRYVFTLFRQTESQQVPHKPPEVRSNFKTRQFATDNGLGLPVAALYFNSQKE 175
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|720041365|ref|XP_010268882.1| (PREDICTED: protein MOTHER of FT and TFL1-like [Nelumbo nucifera]) HSP 1 Score: 132.88 bits (333), Expect = 7.775e-36 Identity = 69/158 (43.67%), Postives = 92/158 (58.23%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQ-PGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DV+D F P ++ + Y S + G I P + P+V L GS+ +LYTL M+DPDAPSP P+ RE+LHWIV +I G+ D +G E+V Y P PP G HRYV T+ +Q G RPP RG F TR F + G+ + V A +F A +
Sbjct: 13 VIGDVLDMFSPTLEFTVHYGSKQVANGCEIKPSAAANKPKVQLSGSRLSNNLYTLVMTDPDAPSPSEPTMREWLHWIVVDIAEGS-DATKGKELVSYMGPRPPTGIHRYVFTLFQQKGPITEETRPPDARGSFNTRNFAAQNGLGLPVAAVYFNAQKE 169
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|659084754|ref|XP_008443056.1| (PREDICTED: protein MOTHER of FT and TFL1-like [Cucumis melo]) HSP 1 Score: 132.109 bits (331), Expect = 1.467e-35 Identity = 68/157 (43.31%), Postives = 98/157 (62.42%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DV+D F P + + ++S +T G I P V+ P++ + G P LYTL M+DPDAPSP P RE++HWI+ +IPGGAN +++G E+VPY+ P PP G HRY+L + +Q G M + PA R F TR F + +D+ V AT+F + +
Sbjct: 13 VIGDVVDMFVPTATMSVYFNSKHVTNGCDIKPSLAVNPPRLVISG-HPCDLYTLVMTDPDAPSPSEPHMREWVHWIIVDIPGGAN-LSQGKEIVPYSGPRPPIGIHRYILLLFKQKGPIGM-IDQPASRANFNTRLFARHFNLDLPVAATYFNSQKE 166
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|449437912|ref|XP_004136734.1| (PREDICTED: protein MOTHER of FT and TF 1-like [Cucumis sativus] >gi|700204170|gb|KGN59303.1| hypothetical protein Csa_3G807330 [Cucumis sativus]) HSP 1 Score: 131.724 bits (330), Expect = 2.415e-35 Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 0
Query: 46 VIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
VI DV+D F P + + ++S +T G I P V+ P++ + G P LYTL M+DPDAPSP P RE++HWI+ +IPGGAN + +G E+VPY+ P PP G HRY+L + +Q G M + PA R F TR F + +D+ V AT+F + +
Sbjct: 13 VIGDVVDMFVPTATMSVYFNSKHVTNGCDIKPSLAVNPPRLVISG-HPCDLYTLVMTDPDAPSPSEPHMREWVHWIIVDIPGGAN-LTQGKEIVPYSGPRPPIGIHRYILLLFKQKGPIGM-IDQPASRANFNTRLFARHFNLDLPVAATYFNSQKE 166
BLAST of EWM29920.1 vs. NCBI_GenBank
Match: gi|1117528111|ref|XP_019446160.1| (PREDICTED: protein MOTHER of FT and TFL1-like [Lupinus angustifolius]) HSP 1 Score: 131.724 bits (330), Expect = 3.607e-35 Identity = 76/195 (38.97%), Postives = 108/195 (55.38%), Query Frame = 0
Query: 8 FLLTFAFLSVASILQPPHRFGAVAQMTKHHAANLRDAGVIPDVIDNFDPQVQIRITYDSLLITPGATILPRQGVHMPQVTLEGSQPGHLYTLFMSDPDAPSPEHPSHREYLHWIVSNIPGGANDIAEGTEVVPYAPPTPPQGTHRYVLTVMEQPGTNPMTVRPPAQRGGFRTRTFGKEAGMDV-VGATFFKAAHQ 201
FLLT +FL +A+ + P L VI DV+D F P V + + + + +T G I P V P++TL G+ +LYTL M+DPDAPSP P HRE +HWIV+NIPGG N +G E++PY P PP G HRY+L + EQ G + +PP+ R F TR F ++ + + V +F + +
Sbjct: 11 FLLTISFLIMATSVDP-----------------LIIGRVIGDVVDMFVPSVNMSVYFGTKHVTNGCHIKPSMAVDPPRITLTGNI-DNLYTLVMTDPDAPSPSEPIHRELIHWIVTNIPGGTNP-NQGNEILPYGGPRPPLGIHRYILVLFEQKGPLDLVEQPPS-RASFNTRYFARQLNLGLPVATVYFNSQKE 185 The following BLAST results are available for this feature:
BLAST of EWM29920.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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