rna7444, rna7444 (mRNA) Nannochloropsis gaditana

Overview
Namerna7444
Unique Namerna7444
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length608
Alignment locationCM002471.1:599431..600816 -

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Properties
Property NameValue
Productendonuclease iii
Orig transcript idgnl|cribi|Naga_101242g1.5536.mrna
Orig protein idgnl|cribi|Naga_101242g1.5536
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:599431..600816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101242g1gene7202Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7444rna7444-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23247.1cds7426Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7444 ID=rna7444|Name=rna7444|organism=Nannochloropsis gaditana|type=mRNA|length=608bp
GTCCTCAGTCTCCCTAGCCTGAAACATGCTTTTGCTTCTGCGAGCAAAGG
TGATGCCCTCGTGAGAATCGCATTGTCAAGGGGACCAGGACAATATCGAT
CGTCCCTACCCTCTTCTCCATGCGGTGGCGCCTCATATTCGTCCTTTCAT
CGCATTTCATCGTCCGCTTTCTCCTCTTCCCTTTCCTCCCTTTGCCTTTT
CAAGGGTCCTGTGCGCAGCACGAGCGGTCTCAACGCAACATGGTGAACGA
ATCGACCTCCTCAACACCATCCTCCGCCTCCGCCTCCGCGGCTGCGCCCT
TCCTCTCCCCCCATCAGAAAGTCACCGCCTCGCCACATGCACAAGGAGAA
CCCCCCATACCACCCCACATTATCCGAGGGCTCGGTGACCGCTCGTACGA
GAAGCGCAAGAACGCCGCACTCGATCTGGAGCAGCACGTGAAATACCTGA
CGGAGAGGAACGACAAAACCCGCCTCCAAGCCACCCTCCATCTGCTGGGG
CAAGAGTTCTGCACGTCGACGAATAGCAACCACAGGAAAGGCGGGCTTAT
CGCCCTGGCAGCCGCTGCCATTGGCTTGATGGGCAGCATCGAGGTGCTCC
TTTACCCC
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protein sequence of rna7444

>rna7444-protein ID=rna7444-protein|Name=rna7444|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MRGPVRSKRNASSPSNPTKRSTKKSRNAVLAPSTTSLTGASSSKANPPSL
PPSLLPSPPPPPPALQAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVI
LSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKAR
NLINMAQKLVDDFGGESSSPSPASGTRRPPWSCPKPLPTLPSPSTRTCTD
APAGGASARTRRT
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mRNA from alignment at CM002471.1:599431..600816-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7444 ID=rna7444|Name=rna7444|organism=Nannochloropsis gaditana|type=mRNA|length=1386bp|location=Sequence derived from alignment at CM002471.1:599431..600816- (Nannochloropsis gaditana)
ATGAGGTGAGAGTTTTAAAGGGAATATTTCATGCCTTTACGACACCACAG
TACATTTTCCTGCGTCTGGGTATAGAGGCTGTGCGCGTGCTTATGATTAC
AGTGTAAAGATGAAGTGTCTGGTTTTTCTCGCTCCCATCTTCGGGAAGGA
CGGGAGCGTGAAAGCTCCTGCGGCAAGTCATAAAGAGAGGCAAAGATGAC
ATTGGCCGTTGTATTTTTTTCCCGGATATAACCACTTCCACGCTCACCTT
TCATCGCCGTCCTCAACCCCATTCCTGCTTCTCATGACCGTTTTTCCTTC
CCTTCTCCCTCCTTCCCACACGTCCATCCCTTGCCAGAGGGCCTGTGCGC
AGCAAACGAAACGCCTCCTCCCCATCTAACCCCACGAAACGTTCGACCAA
AAAGTCACGAAACGCAGTATTGGCACCGTCCACTACCAGCCTCACCGGGG
CAAGCTCCTCGAAAGCCAACCCTCCCTCCCTCCCTCCCTCCCTCCTTCCC
TCCCCTCCTCCCCCCCCGCCCGCCCTTCAAGCCAAAGCAGACACCATCCA
TCGTCTTCTAGACTATCTCTACCCGAGTCCGCCCATCCCTTTGGATCACT
ACGACAATTATTCCCTCCTTGTCGCCGTCATCCTTTCCGCCCAAACCACG
GATGGGAAGGTGGGGAGGTGGGGGAAGAGAGTGACGAAAGGAGGAGAAGG
ACGAGGGGAGGGGGAGGAGGAGGAGAAGAAGGGAGAGGGGGAGGAGGAGG
AGGAGGGGAACGGGGAGAGCCAAAAAGCGAAGGATCTATCACCAAAGAAT
GAAATGATTCACCCACGACCTCCCTTCCCTCCTCCTCCTCCTTCCAGGTC
AATCAAGTCACGCCCGCCCTCTTCCAGCAGGCGCCCACACCCAAGCACTT
GGCCGCCCTCCCCCACGCCCTCGTCCTCGACCTGATCCGACCAGTGGGTC
TGGCCCCTGGGAAGGCGCGAAATCTGATCAATATGGCCCAGAAGCTGGTT
GACGACTTTGGGGGAGAGGTACCTCCGTCCCGCCCTCCGTCCCGCCCTCC
GTCCCGCCCTCCGCCCCACCCTCCTTCCCGCCCTCCTTCCCGCCCTCCTT
CCCGCCCTCCTTCCCGCTCTTGCCTGTCTTCCTTTCCAATGATGTCACTA
GGAACACCGATGGCGCCCTCGAACCTCCCTCCCTCCCTCCCTCCCTCCCT
TCCTCCCTCCCTCCCTCCCTCAGGTTCCCTCCACCTTCGCAGAGCTCGAG
TCCCTCCCCGGCGTCGGGCACAAGACGGCCTCCGTGGTCATGTCCGAAGC
CTTTGCCTACCCTGCCTTCCCCGTCGACACGCACGTGCACCGATGCGCCC
GCCGGTGGGGCCTCTGCCAGGACACGCCGGACGTGA
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Coding sequence (CDS) from alignment at CM002471.1:599431..600816-

>rna7444 ID=rna7444|Name=rna7444|organism=Nannochloropsis gaditana|type=CDS|length=2568bp|location=Sequence derived from alignment at CM002471.1:599431..600816- (Nannochloropsis gaditana)
AGCTCGAGTCCCTCCCCGGCGTCGGGCACAAGACGGCCTCCGTGGTCATG
TCCGAAGCCTTTGCCTACCCTGCCTTCCCCGTCGACACGCACGTGCACCG
ATGCGCCCGCCGGTGGGGCCTCTGCCAGGACACGCCGGACGTGAGTCAAT
CAAGTCACGCCCGCCCTCTTCCAGCAGGCGCCCACACCCAAGCACTTGGC
CGCCCTCCCCCACGCCCTCGTCCTCGACCTGATCCGACCAGTGGGTCTGG
CCCCTGGGAAGGCGCGAAATCTGATCAATATGGCCCAGAAGCTGGTTGAC
GACTTTGGGGGAGAGAGGGCCTGTGCGCAGCAAACGAAACGCCTCCTCCC
CATCTAACCCCACGAAACGTTCGACCAAAAAGTCACGAAACGCAGTATTG
GCACCGTCCACTACCAGCCTCACCGGGGCAAGCTCCTCGAAAGCCAACCC
TCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCCTCCTCCCCCCCCGCCCG
CCCTTCAAGCCAAAGCAGACACCATCCATCGTCTTCTAGACTATCTCTAC
CCGAGTCCGCCCATCCCTTTGGATCACTACGACAATTATTCCCTCCTTGT
CGCCGTCATCCTTTCCGCCCAAACCACGGATGGGAAGATGAGAGCTCGAG
TCCCTCCCCGGCGTCGGGCACAAGACGGCCTCCGTGGTCATGTCCGAAGC
CTTTGCCTACCCTGCCTTCCCCGTCGACACGCACGTGCACCGATGCGCCC
GCCGGTGGGGCCTCTGCCAGGACACGCCGGACGTGAGTCAATCAAGTCAC
GCCCGCCCTCTTCCAGCAGGCGCCCACACCCAAGCACTTGGCCGCCCTCC
CCCACGCCCTCGTCCTCGACCTGATCCGACCAGTGGGTCTGGCCCCTGGG
AAGGCGCGAAATCTGATCAATATGGCCCAGAAGCTGGTTGACGACTTTGG
GGGAGAGAGGGCCTGTGCGCAGCAAACGAAACGCCTCCTCCCCATCTAAC
CCCACGAAACGTTCGACCAAAAAGTCACGAAACGCAGTATTGGCACCGTC
CACTACCAGCCTCACCGGGGCAAGCTCCTCGAAAGCCAACCCTCCCTCCC
TCCCTCCCTCCCTCCTTCCCTCCCCTCCTCCCCCCCCGCCCGCCCTTCAA
GCCAAAGCAGACACCATCCATCGTCTTCTAGACTATCTCTACCCGAGTCC
GCCCATCCCTTTGGATCACTACGACAATTATTCCCTCCTTGTCGCCGTCA
TCCTTTCCGCCCAAACCACGGATGGGAAGATGAGAGCTCGAGTCCCTCCC
CGGCGTCGGGCACAAGACGGCCTCCGTGGTCATGTCCGAAGCCTTTGCCT
ACCCTGCCTTCCCCGTCGACACGCACGTGCACCGATGCGCCCGCCGGTGG
GGCCTCTGCCAGGACACGCCGGACGTGAGTCAATCAAGTCACGCCCGCCC
TCTTCCAGCAGGCGCCCACACCCAAGCACTTGGCCGCCCTCCCCCACGCC
CTCGTCCTCGACCTGATCCGACCAGTGGGTCTGGCCCCTGGGAAGGCGCG
AAATCTGATCAATATGGCCCAGAAGCTGGTTGACGACTTTGGGGGAGAGA
GGGCCTGTGCGCAGCAAACGAAACGCCTCCTCCCCATCTAACCCCACGAA
ACGTTCGACCAAAAAGTCACGAAACGCAGTATTGGCACCGTCCACTACCA
GCCTCACCGGGGCAAGCTCCTCGAAAGCCAACCCTCCCTCCCTCCCTCCC
TCCCTCCTTCCCTCCCCTCCTCCCCCCCCGCCCGCCCTTCAAGCCAAAGC
AGACACCATCCATCGTCTTCTAGACTATCTCTACCCGAGTCCGCCCATCC
CTTTGGATCACTACGACAATTATTCCCTCCTTGTCGCCGTCATCCTTTCC
GCCCAAACCACGGATGGGAAGATGAGAGCTCGAGTCCCTCCCCGGCGTCG
GGCACAAGACGGCCTCCGTGGTCATGTCCGAAGCCTTTGCCTACCCTGCC
TTCCCCGTCGACACGCACGTGCACCGATGCGCCCGCCGGTGGGGCCTCTG
CCAGGACACGCCGGACGTGAGTCAATCAAGTCACGCCCGCCCTCTTCCAG
CAGGCGCCCACACCCAAGCACTTGGCCGCCCTCCCCCACGCCCTCGTCCT
CGACCTGATCCGACCAGTGGGTCTGGCCCCTGGGAAGGCGCGAAATCTGA
TCAATATGGCCCAGAAGCTGGTTGACGACTTTGGGGGAGAGAGGGCCTGT
GCGCAGCAAACGAAACGCCTCCTCCCCATCTAACCCCACGAAACGTTCGA
CCAAAAAGTCACGAAACGCAGTATTGGCACCGTCCACTACCAGCCTCACC
GGGGCAAGCTCCTCGAAAGCCAACCCTCCCTCCCTCCCTCCCTCCCTCCT
TCCCTCCCCTCCTCCCCCCCCGCCCGCCCTTCAAGCCAAAGCAGACACCA
TCCATCGTCTTCTAGACTATCTCTACCCGAGTCCGCCCATCCCTTTGGAT
CACTACGACAATTATTCCCTCCTTGTCGCCGTCATCCTTTCCGCCCAAAC
CACGGATGGGAAGATGAG
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Synonyms
Publications