EWM23247.1, cds7426 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|585104214|gb|EWM23247.1| (endonuclease iii [Nannochloropsis gaditana]) HSP 1 Score: 414.461 bits (1064), Expect = 3.063e-146 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 Query: 1 MRGPVRSKRNASSPSNPTKRSTKKSRNAVLAPSTTSLTGASSSKANPPSLPPSLLPSPPPPPPALQAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGESSSPSPASGTRRPPWSCPKPLPTLPSPSTRTCTDAPAGGASARTRRT 213 MRGPVRSKRNASSPSNPTKRSTKKSRNAVLAPSTTSLTGASSSKANPPSLPPSLLPSPPPPPPALQAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGESSSPSPASGTRRPPWSCPKPLPTLPSPSTRTCTDAPAGGASARTRRT Sbjct: 1 MRGPVRSKRNASSPSNPTKRSTKKSRNAVLAPSTTSLTGASSSKANPPSLPPSLLPSPPPPPPALQAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGESSSPSPASGTRRPPWSCPKPLPTLPSPSTRTCTDAPAGGASARTRRT 213
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|931429158|gb|KPK14970.1| (endonuclease III [Myxococcales bacterium SG8_38]) HSP 1 Score: 130.183 bits (326), Expect = 4.147e-34 Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 KA+ I +LD LYP PPIPL H D ++LLVAV+LSAQTTD KVN+VTPALFQ+AP P+ +AALP +L+LIR VGLAP KA+NL MA+KLVD+ GG+ Sbjct: 6 KAERIGAILDRLYPEPPIPLHHRDPFTLLVAVMLSAQTTDKKVNEVTPALFQEAPDPESMAALPVERILELIRTVGLAPTKAKNLQAMARKLVDEHGGK 104
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|501182043|ref|WP_012225149.1| (endonuclease III [Candidatus Microthrix parvicella] >gi|499278683|emb|CCM63075.1| endonuclease III [Candidatus Microthrix parvicella RN1]) HSP 1 Score: 123.25 bits (308), Expect = 2.097e-31 Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 KAD I +LD LYP PPIPLDH + Y+LLVAV LSAQTTD KVNQVTPALF +A TP+ +AAL +L LIR VGLAP KARNL MA ++VD GGE Sbjct: 6 KADRIGEILDRLYPEPPIPLDHRNPYTLLVAVALSAQTTDKKVNQVTPALFDRASTPEEMAALDPDEILGLIREVGLAPTKARNLSTMAHQIVDA-GGE 103
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|1200451021|gb|OUV66875.1| (endonuclease III [Euryarchaeota archaeon TMED129]) HSP 1 Score: 119.783 bits (299), Expect = 4.919e-30 Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGESSSPSPASGTRRPPWSCPKPL 187 KA+ I LLDYLYP PIPLD D Y+LLVAV+LSAQTTD KVNQVTP LFQ A P + AL ++ D+IR VGLAP KA+NL MA+++++ + G +P W+ + L Sbjct: 6 KAEKIGELLDYLYPEQPIPLDXKDEYTLLVAVMLSAQTTDKKVNQVTPKLFQIADNPVKMHALEVDVIQDIIREVGLAPTKAKNLKKMAEQIIE-----------SGGVIKPEWNFLESL 114
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|665913539|ref|WP_031279591.1| (endonuclease III [Candidatus Microthrix parvicella]) HSP 1 Score: 118.627 bits (296), Expect = 1.305e-29 Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 KAD I +LD LYP PPIPLDH + Y+LLVAV LSAQTTD KVNQVTPALF +A TP+ +AAL +L IR VGLAP K+RNL MA ++V+ GGE Sbjct: 6 KADRIGEILDRLYPDPPIPLDHRNPYTLLVAVALSAQTTDKKVNQVTPALFDRASTPEEMAALDPDEILGFIREVGLAPTKSRNLSTMAHQIVEA-GGE 103
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|1179934959|ref|WP_083457314.1| (endonuclease III [Sandaracinus amylolyticus] >gi|816955642|gb|AKF05148.1| Endonuclease III [Sandaracinus amylolyticus]) HSP 1 Score: 117.857 bits (294), Expect = 4.435e-29 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 KA I +L+ LYPSPPIPLDH D ++LLVAV+LSAQTTD KVN+VTPALF APTP+ +AAL A +L IR VGL+P KA+ L +A K+ + GG+ Sbjct: 11 KAARILEILERLYPSPPIPLDHVDAFTLLVAVVLSAQTTDKKVNEVTPALFAAAPTPEAMAALSEAEILAYIRQVGLSPQKAKALKGLATKIATEHGGQ 109
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|927067747|ref|WP_053777976.1| (endonuclease III [Gordonia sp. NB4-1Y] >gi|926660990|gb|KOY49305.1| endonuclease [Gordonia sp. NB4-1Y]) HSP 1 Score: 117.087 bits (292), Expect = 6.088e-29 Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 0 Query: 66 QAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 Q K + I LLD LYP+ PIPLDH D Y+LLVAV LSAQTTD KVNQVTPALF A TP+ +AAL +L+LIR +GLAP KARNL A ++++ GGE Sbjct: 4 QEKVERIGTLLDELYPTQPIPLDHTDAYTLLVAVALSAQTTDKKVNQVTPALFAVADTPEKMAALGPDRILELIREIGLAPTKARNLWTAAGQIIEA-GGE 103
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|505254315|ref|WP_015441417.1| (endonuclease III [Ilumatobacter coccineus] >gi|464099288|dbj|BAN02170.1| putative endonuclease III [Ilumatobacter coccineus YM16-304]) HSP 1 Score: 116.701 bits (291), Expect = 6.913e-29 Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0 Query: 66 QAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 Q KAD I +L+ LYP+PP+PLDH D Y+LLVAV LSAQTTD KVN+VTPALF+ A TP+ +AAL +L I+ VGLAP KA+NL MA +++D GGE Sbjct: 4 QEKADRIGEILEELYPNPPVPLDHTDPYTLLVAVALSAQTTDKKVNEVTPALFEAAGTPEKMAALDPEEILGYIKTVGLAPTKAKNLWLMANQILDA-GGE 103
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|750188438|ref|WP_040492512.1| (endonuclease III [Ilumatobacter nonamiensis]) HSP 1 Score: 115.161 bits (287), Expect = 2.403e-28 Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 0 Query: 66 QAKADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 Q KAD I +LD LYP+PP+PLDH D Y+LLVAV+LSAQTTD KVN+VTP LF A TP+ +AAL +L IR VGLAP KA+NL MA +++D GGE Sbjct: 4 QDKADRIGEILDELYPNPPVPLDHTDPYTLLVAVMLSAQTTDKKVNEVTPGLFAVADTPQKMAALDPEDILAHIRTVGLAPTKAKNLWLMANQIIDA-GGE 103
BLAST of EWM23247.1 vs. NCBI_GenBank
Match: gi|747217533|gb|KIG17077.1| (Endonuclease III [Enhygromyxa salina]) HSP 1 Score: 115.931 bits (289), Expect = 2.505e-28 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0 Query: 68 KADTIHRLLDYLYPSPPIPLDHYDNYSLLVAVILSAQTTDGKVNQVTPALFQQAPTPKHLAALPHALVLDLIRPVGLAPGKARNLINMAQKLVDDFGGE 166 KA I +LD LYP PPIPL H D ++LL+AV+LSAQTTD +VN+VTPALF PTP +AAL A +L IR +GLAP KA+ + +AQ+LVD+F GE Sbjct: 6 KAQKILAILDELYPDPPIPLRHQDPFTLLIAVLLSAQTTDARVNEVTPALFNDGPTPATMAALSTATILRHIRTLGLAPTKAKRVKALAQQLVDEFDGE 104 The following BLAST results are available for this feature:
BLAST of EWM23247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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