rna7433, rna7433 (mRNA) Nannochloropsis gaditana

Overview
Namerna7433
Unique Namerna7433
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length891
Alignment locationCM002471.1:572002..572471 -

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Properties
Property NameValue
Productmicrotubule associated protein
Orig transcript idgnl|cribi|Naga_103480g1.3226.mrna
Orig protein idgnl|cribi|Naga_103480g1.3226
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:572002..572471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103480g1gene7192Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7433rna7433-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23258.1cds7415Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7433 ID=rna7433|Name=rna7433|organism=Nannochloropsis gaditana|type=mRNA|length=891bp
GAGGGGTTGCACGGTTTGGAGAGAGCACGCAGGCACGGAGGAGAGAAGCG
GCATAAGAAATTAGGCGCGCGCAAATAAGGAGAGGGTACGGGAGAAAGTC
GAGTAGAGAGAGAGGAAATGCCTGCGTGGAACGGGGTCGTGGAAGCTGGG
AGGACAATAGCAAGGACGCAGGGGAGGGAGGAAGGGAGGGAGGGAGGGAG
GGGGGAGGGAGGGAGGGAGGGAGGGAGGGTCAGGGAAAGCAGGCCCGGGG
AATTATATTGATAAGTGTAACGGATGACAGAGGGTGCGCACGCGTGACAA
ACTGTGAAACCTGAGGCTACTTTCGTAGAATGAAATCAAAGAAAAATGTG
GTAGGCGCGGAGGGCGGGGAAAGGGAGGAGGGAGGTGGGCTGTTGAAGGA
GGGAGAAAGCAAGACCAGTAATTGCCGAGTCGTTGCTTCTCCGATTTGAG
TGAGTGAAGAGAGAGTTCCCTGAGTGAGAGTAGAGAGTATGACATGGAAA
CGGGGGCATGATTAAGAGGGAAGGATGTCTGGCAGAAAGAAAGGTGAAGA
GGGGGGATTGTCTCCCACACATACGGTGGAGCTGCGTCTATGGAGAAAGG
AGGGAGGAAGGGAGAGAGGAAAAGGGAGGAGAAGAAGAAGAAGAAGGAGA
AGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAAAGG
AGAATCAGGGAGGACGCAGCAGTGGCAGAGAACCTGCGAGAAAGAATTGA
AATGAGAGTCAAAAAATTGTGACCCCTGTATCCGTAGAGCTTCCTACTGG
CATCTTCCAGGCAAAAGGAGGAGGCAGGGCAAGGGAGAGAGGGAAGACAA
GCCGGGCAAAGTCAACCATGAACCTATCCATCGCCGAACTC
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protein sequence of rna7433

>rna7433-protein ID=rna7433-protein|Name=rna7433|organism=Nannochloropsis gaditana|type=polypeptide|length=81bp
MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLDYGPASALGK
RGLREIGKYLDAREPEVRSAALEVILEVFER
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mRNA from alignment at CM002471.1:572002..572471-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7433 ID=rna7433|Name=rna7433|organism=Nannochloropsis gaditana|type=mRNA|length=470bp|location=Sequence derived from alignment at CM002471.1:572002..572471- (Nannochloropsis gaditana)
TCCCCAGTTGATGCGTCTGGTCTGCGATCTCTACCCTTTCAGCAAGTACG
GCCCCTACCTGGTCGCTGCCCTCGGCACCAAGAACCTCCGAAGCCGCGCG
GCCTGCCTCGACGAATGCCGTCGGCTCCTGGACTACGGCCCTGCGTCTGC
CCTGGGGAAACGAGGGTTGCGGGAGGTGCGACTCTTCTTGGGGAAGAAGG
GAAAGTGTGCACACACCCCGGGGGGAATTGCATGTTGCCATGCATTCATG
TATGCTCGTGTGGATGTTGGATGGTTACTTTGCCTTTGGGGGGGGGATGT
GTATGTGGAACTGGAAGCTCCATTTTCGACCCCGTCTTCTTTCCCTCCTT
CCCTCCCTCTCTTCTTCCTCTGCGTTCCTAGATTGGCAAGTATCTCGACG
CGCGAGAACCAGAGGTTCGATCCGCTGCCCTCGAGGTCATACTTGAGGTC
TTCGAAAGGTAACCCTTCCT
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Coding sequence (CDS) from alignment at CM002471.1:572002..572471-

>rna7433 ID=rna7433|Name=rna7433|organism=Nannochloropsis gaditana|type=CDS|length=492bp|location=Sequence derived from alignment at CM002471.1:572002..572471- (Nannochloropsis gaditana)
ATTGGCAAGTATCTCGACGCGCGAGAACCAGAGGTTCGATCCGCTGCCCT
CGAGGTCATACTTGAGGTCTTCGAAAGGTAAATGCGTCTGGTCTGCGATC
TCTACCCTTTCAGCAAGTACGGCCCCTACCTGGTCGCTGCCCTCGGCACC
AAGAACCTCCGAAGCCGCGCGGCCTGCCTCGACGAATGCCGTCGGCTCCT
GGACTACGGCCCTGCGTCTGCCCTGGGGAAACGAGGGTTGCGGGAGATTG
GCAAGTATCTCGACGCGCGAGAACCAGAGGTTCGATCCGCTGCCCTCGAG
GTCATACTTGAGGTCTTCGAAAGGTAAATGCGTCTGGTCTGCGATCTCTA
CCCTTTCAGCAAGTACGGCCCCTACCTGGTCGCTGCCCTCGGCACCAAGA
ACCTCCGAAGCCGCGCGGCCTGCCTCGACGAATGCCGTCGGCTCCTGGAC
TACGGCCCTGCGTCTGCCCTGGGGAAACGAGGGTTGCGGGAG
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Synonyms
Publications