EWM23258.1, cds7415 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|585104241|gb|EWM23258.1| (microtubule associated protein [Nannochloropsis gaditana]) HSP 1 Score: 160.999 bits (406), Expect = 4.113e-50 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER 81
MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER
Sbjct: 1 MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER 81
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|298707422|emb|CBJ30051.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.3218 bits (168), Expect = 6.381e-12 Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 7 LYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLDY-GPASALGKRGLREIGKYLDAREPEVRSAALEVI 75
L ++KY P L+ A +KN R+R ACL E R + GPASALGK+GL+E+ K++D+ + EVRSAAL+ +
Sbjct: 1411 LCSYAKYSPLLLQATASKNSRTRIACLLELSRCIGADGPASALGKKGLKELAKHVDSDQAEVRSAALDAV 1480
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|698797942|ref|XP_009832000.1| (hypothetical protein H257_07966 [Aphanomyces astaci] >gi|574112928|gb|ETV78419.1| hypothetical protein H257_07966 [Aphanomyces astaci]) HSP 1 Score: 63.5438 bits (153), Expect = 6.249e-10 Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVF 79
+RLV +YP +K PYL+ + +KN +SR+ CLD + D +A+G++ LR++GKY+D E EVR +A+ +++++
Sbjct: 1451 LRLVVHVYPSAKLTPYLLECITNSKNSKSRSECLDLIEFIADTKGHAAVGRKTLRDVGKYVDCAEKEVRESAIGAVVKMY 1530
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|673025252|ref|XP_008866587.1| (hypothetical protein H310_04156 [Aphanomyces invadans] >gi|574478153|gb|ETW05149.1| hypothetical protein H310_04156 [Aphanomyces invadans]) HSP 1 Score: 63.5438 bits (153), Expect = 6.497e-10 Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVF 79
+RLV +YP +K PYL+ + +KN +SR+ CLD + + +A+G++ LR+I KY+D E EVR +A+ ++ +F
Sbjct: 1460 LRLVVQVYPSAKLTPYLLDCITNSKNSKSRSECLDLIEYIAETKGHAAVGRKTLRDIAKYVDCSEKEVRESAIAAVVRIF 1539
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|1214700020|gb|OWZ12692.1| (Cytoskeleton-associated protein [Phytophthora megakarya]) HSP 1 Score: 62.3882 bits (150), Expect = 1.706e-9 Identity = 28/82 (34.15%), Postives = 53/82 (64.63%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER 81
M+LV D+Y KY P+L+ G+KN++SR C+D ++ + LG++ ++++GKY+ A E E+R +A+ ++ V++R
Sbjct: 1489 MKLVVDVYNPEKYVPFLMECFNGSKNMKSRCECIDLVEYIVSVHGYNVLGRKCIKDVGKYVVAHEKELRESAINALIAVYKR 1570
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|1173943399|gb|OQR92258.1| (cytoskeleton-associated protein [Achlya hypogyna]) HSP 1 Score: 60.4622 bits (145), Expect = 8.376e-9 Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVF 79
MRLV ++P +KY PYL+ L +KN +SR CLD ++ +A+GK+ LRE+ K +D E +VR A++ ++ V+
Sbjct: 1419 MRLVVQVFPAAKYVPYLLECLANSKNTKSRTECLDALEFIVAEQGYAAVGKKCLREVAKCVDCSEKDVRECAIQTLVAVY 1498
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|695399397|ref|XP_009522253.1| (hypothetical protein PHYSODRAFT_350421 [Phytophthora sojae] >gi|348679720|gb|EGZ19536.1| hypothetical protein PHYSODRAFT_350421 [Phytophthora sojae]) HSP 1 Score: 60.077 bits (144), Expect = 9.061e-9 Identity = 28/82 (34.15%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER 81
M+LV D+Y KY PYL+ G+KN++SR C+D ++ +G++ ++++GKY+ A E E+R +A+ ++ V+ R
Sbjct: 1502 MKLVVDVYNPEKYVPYLMECFNGSKNMKSRCECIDLVEYIVSVHGYQMIGRKCIKDVGKYVVAHEKELRESAINTLVAVYMR 1583
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|170043566|ref|XP_001849454.1| (microtubule associated protein xmap215 [Culex quinquefasciatus] >gi|167866860|gb|EDS30243.1| microtubule associated protein xmap215 [Culex quinquefasciatus]) HSP 1 Score: 60.077 bits (144), Expect = 1.155e-8 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLD-YGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVF 79
+R +C +YPF+K +++ AL +KN R RA CLDE L++ YG +A L+EI K++ R+ VR+AAL +++ +
Sbjct: 1289 LRQICLVYPFAKVFVFIMDALKSKNARQRAECLDELGYLIETYGLTAA-----LKEIAKHISDRDNSVRNAALNTVVQAY 1363
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|953487952|emb|CEG47969.1| (Microtubule-associated protein [Plasmopara halstedii]) HSP 1 Score: 60.077 bits (144), Expect = 1.180e-8 Identity = 27/82 (32.93%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAAL-GTKNLRSRAACLDECRRLLDYGPASALGKRGLREIGKYLDAREPEVRSAALEVILEVFER 81
M+LV D++ +Y PYL+ G+KN++SR C+D ++ +G++ +RE+ KY+ A E E+R +A+ +++ V+ R
Sbjct: 1494 MKLVVDVFSPERYVPYLIDCFNGSKNMKSRCECIDLVEYIVTVYGHHVIGRKCVREVSKYVVAHEKELRESAISLLVSVYTR 1575
BLAST of EWM23258.1 vs. NCBI_GenBank
Match: gi|668447792|gb|KFB37532.1| (hypothetical protein ZHAS_00004761 [Anopheles sinensis]) HSP 1 Score: 58.5362 bits (140), Expect = 4.130e-8 Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 0
Query: 1 MRLVCDLYPFSKYGPYLVAALGTKNLRSRAACLDECRRLLD-YG-----PASALGKRGLREIGKYLDAREPEVRSAALEVILEVF 79
+R +C LYPFSK +++ AL +KN R RA CLDE L++ YG P+ + L+EI +++ R+ VR+AAL +++ +
Sbjct: 1958 LRQICLLYPFSKVFVFIMDALKSKNARQRAECLDELGYLIETYGLTVCQPSQPV---ALKEIARHISDRDNAVRNAALNAVVQAY 2039 The following BLAST results are available for this feature:
BLAST of EWM23258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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