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Properties
| Property Name | Value |
|---|
| Product | pre-mrna-splicing factor isy1 |
| Orig transcript id | gnl|cribi|Naga_100829g2.9007.mrna |
| Orig protein id | gnl|cribi|Naga_100829g2.9007 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:553750..555492 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of rna7423 >rna7423-protein ID=rna7423-protein|Name=rna7423|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQI
IKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDY
NRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRG
DMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGE
GEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVP
CQEDIMTALMEKKKRALLSKYG back to topmRNA from alignment at CM002471.1:553750..555492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7423 ID=rna7423|Name=rna7423|organism=Nannochloropsis gaditana|type=mRNA|length=1743bp|location=Sequence derived from alignment at CM002471.1:553750..555492- (Nannochloropsis gaditana)
ATGGCTCGAAATGAAGAAAAAGCGCAAGCCATGCTCAATAAGTGGCTGAC
CATGAAAAAGGATTTGGCAACCGGTGCGTTCGGGCGCAAGGAGGCAGGGA
GGGCGGGGAGAGCGCGGAGGCCTCATAGGGTCAAGCAGGGGTATTTATGG
TGCTCCACGAAACGAAACATTGGTCGAGCGATGGACTTAAATGAGGAGAA
GAGTTTAGGTTTTCTCGGTGTAACCCGCCGCATGTTTTAGCTTATTCATG
CCATTGTTTCTTCCCTCCCTTCCTTCCCCATCATGCCCCCCGAATCCCTC
CAGGCGACAAAGAACGGCGCCCTTTCCTTTCCTCTGACTGCCACGTGTTA
TCGGAGGCGGAGCGTTGGCGGCGACAGATCATCAAGGTAGGCGATGGGAT
TGGAGGGAAGGAGGGAGGGACGGATGTGATGGATTTTTTGCTCCTTCTCA
CCCTCCCCCACGGCCATTCCCCTCACAGGAAGTGACCAAAAAGGTGTCGG
AGGTACAAAATGCAGGGCTGGGCGAGCACCGTCTCCGTGACCTCAACGAC
CAGATCAACAAGCTTTTGAGGGAGAAGTACCATTGGCAGAAACGCATCAA
GGAGCTAGGTCCGTCCTCCTTCCCTACCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCGTCTTTCGCTCCCTCCCTCAATTCATCGGTTCTTTTGCGTT
TCCTGTGCGTACCGGAAAATACCTGATCAGGTGGCTCTTCTGATATCATT
CACCGATTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCCTC
CCTCCCTCAGGCGGACCTGATTACAACCGGATCGAACCTCGCGCGTACGA
TGCGGACGGCCGAGAACTTCCGGGAGGAGGCGGGTACCGATACTTTGGCG
CCGCCAAGGTAGCCTCCCTCCCTCCCTCCCTCGATCCCTCCCTCCCTCGA
TCCCTCCCTCCCTTTCTACCCTATTCTTTTTCTCGAGGAGGGTAAAAACG
GCCTTGGAAATTTTCATTGCTCTCCTTCTCTTTTCGGCTCCGGCTTGTAC
ACCGCTGGAGCATACCAAGAAGTACGCTTTCTCCCTCTCTTTTCCTCCTC
CCCTTCCTCAACCCCTTCCTCCGCCCCTCCCTCCCTTTCTCCAGGACCTC
CCGGGTGTGAAGGAGCTCTTTCAGAAGTCAGCGCCGAAGGAGATGCGTCG
TACGAGGGGGGACATGTATAAAGGGATCGATCCCGACTACTATGGCTACA
GGTACCCCTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTTTCTCGCTCTTC
TCCGGTCTTTCAGTGGGATGGTACCGCAGACCTCGGGATTGGGAACGACT
CATTTGCCGTGTGTACCCAAGAGCTTGACTGATACTCCCTTCCTCCCTCC
TTCCCTTTCCGTCAGGGACGAGGAGGATGGGATTCTGTTGGAGAAGGAGC
GGGAAGCTGAAAAGGAAGCAATCGCGGCTGCGGTGCGTCAATTCAAAAAG
AGAGCCCGGGAAGAAAAAGGGGAGGGGGAGGAGACGGAGGAGGGCGCGAA
GGAGGAGGAGGAGGAGGAGAGGCTTCTGGCTCAGTCTCTGATAGCGGCGA
CCGAGTCGGTGGCAGGGGGGGCGGCGGCCAGCGCCGCGACCAGTGCGGCT
GTGAAAGCCCACGTTCCAGTGCCTTGCCAGGAAGATATCATGACGGCTTT
GATGGAAAAGAAAAAAAGGGCCTTACTCTCCAAGTATGGATGA back to topCoding sequence (CDS) from alignment at CM002471.1:553750..555492- >rna7423 ID=rna7423|Name=rna7423|organism=Nannochloropsis gaditana|type=CDS|length=4914bp|location=Sequence derived from alignment at CM002471.1:553750..555492- (Nannochloropsis gaditana)
GGACGAGGAGGATGGGATTCTGTTGGAGAAGGAGCGGGAAGCTGAAAAGG
AAGCAATCGCGGCTGCGGTGCGTCAATTCAAAAAGAGAGCCCGGGAAGAA
AAAGGGGAGGGGGAGGAGACGGAGGAGGGCGCGAAGGAGGAGGAGGAGGA
GGAGAGGCTTCTGGCTCAGTCTCTGATAGCGGCGACCGAGTCGGTGGCAG
GGGGGGCGGCGGCCAGCGCCGCGACCAGTGCGGCTGTGAAAGCCCACGTT
CCAGTGCCTTGCCAGGAAGATATCATGACGGCTTTGATGGAAAAGAAAAA
AAGGGCCTTACTCTCCAAGTATGGATGAGACCTCCCGGGTGTGAAGGAGC
TCTTTCAGAAGTCAGCGCCGAAGGAGATGCGTCGTACGAGGGGGGACATG
TATAAAGGGATCGATCCCGACTACTATGGCTACAGGCGGACCTGATTACA
ACCGGATCGAACCTCGCGCGTACGATGCGGACGGCCGAGAACTTCCGGGA
GGAGGCGGGTACCGATACTTTGGCGCCGCCAAGGAAGTGACCAAAAAGGT
GTCGGAGGTACAAAATGCAGGGCTGGGCGAGCACCGTCTCCGTGACCTCA
ACGACCAGATCAACAAGCTTTTGAGGGAGAAGTACCATTGGCAGAAACGC
ATCAAGGAGCTAGGCGACAAAGAACGGCGCCCTTTCCTTTCCTCTGACTG
CCACGTGTTATCGGAGGCGGAGCGTTGGCGGCGACAGATCATCAAGATGG
CTCGAAATGAAGAAAAAGCGCAAGCCATGCTCAATAAGTGGCTGACCATG
AAAAAGGATTTGGCAACCGGGACGAGGAGGATGGGATTCTGTTGGAGAAG
GAGCGGGAAGCTGAAAAGGAAGCAATCGCGGCTGCGGTGCGTCAATTCAA
AAAGAGAGCCCGGGAAGAAAAAGGGGAGGGGGAGGAGACGGAGGAGGGCG
CGAAGGAGGAGGAGGAGGAGGAGAGGCTTCTGGCTCAGTCTCTGATAGCG
GCGACCGAGTCGGTGGCAGGGGGGGCGGCGGCCAGCGCCGCGACCAGTGC
GGCTGTGAAAGCCCACGTTCCAGTGCCTTGCCAGGAAGATATCATGACGG
CTTTGATGGAAAAGAAAAAAAGGGCCTTACTCTCCAAGTATGGATGAGAC
CTCCCGGGTGTGAAGGAGCTCTTTCAGAAGTCAGCGCCGAAGGAGATGCG
TCGTACGAGGGGGGACATGTATAAAGGGATCGATCCCGACTACTATGGCT
ACAGGCGGACCTGATTACAACCGGATCGAACCTCGCGCGTACGATGCGGA
CGGCCGAGAACTTCCGGGAGGAGGCGGGTACCGATACTTTGGCGCCGCCA
AGGAAGTGACCAAAAAGGTGTCGGAGGTACAAAATGCAGGGCTGGGCGAG
CACCGTCTCCGTGACCTCAACGACCAGATCAACAAGCTTTTGAGGGAGAA
GTACCATTGGCAGAAACGCATCAAGGAGCTAGGCGACAAAGAACGGCGCC
CTTTCCTTTCCTCTGACTGCCACGTGTTATCGGAGGCGGAGCGTTGGCGG
CGACAGATCATCAAGATGGCTCGAAATGAAGAAAAAGCGCAAGCCATGCT
CAATAAGTGGCTGACCATGAAAAAGGATTTGGCAACCGGGACGAGGAGGA
TGGGATTCTGTTGGAGAAGGAGCGGGAAGCTGAAAAGGAAGCAATCGCGG
CTGCGGTGCGTCAATTCAAAAAGAGAGCCCGGGAAGAAAAAGGGGAGGGG
GAGGAGACGGAGGAGGGCGCGAAGGAGGAGGAGGAGGAGGAGAGGCTTCT
GGCTCAGTCTCTGATAGCGGCGACCGAGTCGGTGGCAGGGGGGGCGGCGG
CCAGCGCCGCGACCAGTGCGGCTGTGAAAGCCCACGTTCCAGTGCCTTGC
CAGGAAGATATCATGACGGCTTTGATGGAAAAGAAAAAAAGGGCCTTACT
CTCCAAGTATGGATGAGACCTCCCGGGTGTGAAGGAGCTCTTTCAGAAGT
CAGCGCCGAAGGAGATGCGTCGTACGAGGGGGGACATGTATAAAGGGATC
GATCCCGACTACTATGGCTACAGGCGGACCTGATTACAACCGGATCGAAC
CTCGCGCGTACGATGCGGACGGCCGAGAACTTCCGGGAGGAGGCGGGTAC
CGATACTTTGGCGCCGCCAAGGAAGTGACCAAAAAGGTGTCGGAGGTACA
AAATGCAGGGCTGGGCGAGCACCGTCTCCGTGACCTCAACGACCAGATCA
ACAAGCTTTTGAGGGAGAAGTACCATTGGCAGAAACGCATCAAGGAGCTA
GGCGACAAAGAACGGCGCCCTTTCCTTTCCTCTGACTGCCACGTGTTATC
GGAGGCGGAGCGTTGGCGGCGACAGATCATCAAGATGGCTCGAAATGAAG
AAAAAGCGCAAGCCATGCTCAATAAGTGGCTGACCATGAAAAAGGATTTG
GCAACCGGGACGAGGAGGATGGGATTCTGTTGGAGAAGGAGCGGGAAGCT
GAAAAGGAAGCAATCGCGGCTGCGGTGCGTCAATTCAAAAAGAGAGCCCG
GGAAGAAAAAGGGGAGGGGGAGGAGACGGAGGAGGGCGCGAAGGAGGAGG
AGGAGGAGGAGAGGCTTCTGGCTCAGTCTCTGATAGCGGCGACCGAGTCG
GTGGCAGGGGGGGCGGCGGCCAGCGCCGCGACCAGTGCGGCTGTGAAAGC
CCACGTTCCAGTGCCTTGCCAGGAAGATATCATGACGGCTTTGATGGAAA
AGAAAAAAAGGGCCTTACTCTCCAAGTATGGATGAGACCTCCCGGGTGTG
AAGGAGCTCTTTCAGAAGTCAGCGCCGAAGGAGATGCGTCGTACGAGGGG
GGACATGTATAAAGGGATCGATCCCGACTACTATGGCTACAGGCGGACCT
GATTACAACCGGATCGAACCTCGCGCGTACGATGCGGACGGCCGAGAACT
TCCGGGAGGAGGCGGGTACCGATACTTTGGCGCCGCCAAGGAAGTGACCA
AAAAGGTGTCGGAGGTACAAAATGCAGGGCTGGGCGAGCACCGTCTCCGT
GACCTCAACGACCAGATCAACAAGCTTTTGAGGGAGAAGTACCATTGGCA
GAAACGCATCAAGGAGCTAGGCGACAAAGAACGGCGCCCTTTCCTTTCCT
CTGACTGCCACGTGTTATCGGAGGCGGAGCGTTGGCGGCGACAGATCATC
AAGATGGCTCGAAATGAAGAAAAAGCGCAAGCCATGCTCAATAAGTGGCT
GACCATGAAAAAGGATTTGGCAACCGGGACGAGGAGGATGGGATTCTGTT
GGAGAAGGAGCGGGAAGCTGAAAAGGAAGCAATCGCGGCTGCGGTGCGTC
AATTCAAAAAGAGAGCCCGGGAAGAAAAAGGGGAGGGGGAGGAGACGGAG
GAGGGCGCGAAGGAGGAGGAGGAGGAGGAGAGGCTTCTGGCTCAGTCTCT
GATAGCGGCGACCGAGTCGGTGGCAGGGGGGGCGGCGGCCAGCGCCGCGA
CCAGTGCGGCTGTGAAAGCCCACGTTCCAGTGCCTTGCCAGGAAGATATC
ATGACGGCTTTGATGGAAAAGAAAAAAAGGGCCTTACTCTCCAAGTATGG
ATGAGACCTCCCGGGTGTGAAGGAGCTCTTTCAGAAGTCAGCGCCGAAGG
AGATGCGTCGTACGAGGGGGGACATGTATAAAGGGATCGATCCCGACTAC
TATGGCTACAGGCGGACCTGATTACAACCGGATCGAACCTCGCGCGTACG
ATGCGGACGGCCGAGAACTTCCGGGAGGAGGCGGGTACCGATACTTTGGC
GCCGCCAAGGAAGTGACCAAAAAGGTGTCGGAGGTACAAAATGCAGGGCT
GGGCGAGCACCGTCTCCGTGACCTCAACGACCAGATCAACAAGCTTTTGA
GGGAGAAGTACCATTGGCAGAAACGCATCAAGGAGCTAGGCGACAAAGAA
CGGCGCCCTTTCCTTTCCTCTGACTGCCACGTGTTATCGGAGGCGGAGCG
TTGGCGGCGACAGATCATCAAGATGGCTCGAAATGAAGAAAAAGCGCAAG
CCATGCTCAATAAGTGGCTGACCATGAAAAAGGATTTGGCAACCGGGACG
AGGAGGATGGGATTCTGTTGGAGAAGGAGCGGGAAGCTGAAAAGGAAGCA
ATCGCGGCTGCGGTGCGTCAATTCAAAAAGAGAGCCCGGGAAGAAAAAGG
GGAGGGGGAGGAGACGGAGGAGGGCGCGAAGGAGGAGGAGGAGGAGGAGA
GGCTTCTGGCTCAGTCTCTGATAGCGGCGACCGAGTCGGTGGCAGGGGGG
GCGGCGGCCAGCGCCGCGACCAGTGCGGCTGTGAAAGCCCACGTTCCAGT
GCCTTGCCAGGAAGATATCATGACGGCTTTGATGGAAAAGAAAAAAAGGG
CCTTACTCTCCAAGTATGGATGAGACCTCCCGGGTGTGAAGGAGCTCTTT
CAGAAGTCAGCGCCGAAGGAGATGCGTCGTACGAGGGGGGACATGTATAA
AGGGATCGATCCCGACTACTATGGCTACAGGCGGACCTGATTACAACCGG
ATCGAACCTCGCGCGTACGATGCGGACGGCCGAGAACTTCCGGGAGGAGG
CGGGTACCGATACTTTGGCGCCGCCAAGGAAGTGACCAAAAAGGTGTCGG
AGGTACAAAATGCAGGGCTGGGCGAGCACCGTCTCCGTGACCTCAACGAC
CAGATCAACAAGCTTTTGAGGGAGAAGTACCATTGGCAGAAACGCATCAA
GGAGCTAGGCGACAAAGAACGGCGCCCTTTCCTTTCCTCTGACTGCCACG
TGTTATCGGAGGCGGAGCGTTGGCGGCGACAGATCATCAAGATGGCTCGA
AATGAAGAAAAAGCGCAAGCCATGCTCAATAAGTGGCTGACCATGAAAAA
GGATTTGGCAACCG back to top
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