EWM23267.1, cds7405 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|585104264|gb|EWM23267.1| (pre-mrna-splicing factor isy1 [Nannochloropsis gaditana]) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG 272 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG Sbjct: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG 272
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|299473042|emb|CBN77435.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 281.182 bits (718), Expect = 1.190e-91 Identity = 150/259 (57.92%), Postives = 185/259 (71.43%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTAL 259 MARNEEKAQ M+NKW TMK+ +A ++ RRPFLSS+C L +AE WRR II+E +K V +QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY P++YDADGRELPGGGGY YFGAAK LPGV+ELF KS + RRTR DMY+ I PDYYGYRDEEDG+L+ KE EK + +AV +++ R +GEE G ++E+ + + Q+ AASAATSA V+AHVPVP Q+ I A+ Sbjct: 1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQAEKRRRLEDGEEEAGGDADDEDVQDVQGQAA----------EAASAATSAEVRAHVPVPSQDAIKEAI 249
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|1126201071|ref|XP_019633873.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Branchiostoma belcheri]) HSP 1 Score: 266.929 bits (681), Expect = 5.494e-86 Identity = 140/272 (51.47%), Postives = 186/272 (68.38%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG 272 MARN EKA L +W M+ D KERRPFL+S+ + L +AE+WR QII+EV KKVS++QNAGLGE R+RDLND+INKLLREK HW++RIKELGGPDY R+ P+ D +G+E+PG GY+YFGAAKDLPGV+ELF++ P RRTR ++YK +D DYYGYRDE+DG+L+ E++ EKE +A AV ++K +++E G K+ EEEE + A + E + AHVPVP Q+++ AL+ +KK LL KY Sbjct: 1 MARNAEKAMTTLARWRNMQMDQGKV-KERRPFLASEENDLGKAEKWRHQIIREVAKKVSQIQNAGLGEFRIRDLNDEINKLLREKKHWEERIKELGGPDYERVGPKMLDQEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRRTRAELYKEVDADYYGYRDEDDGVLVPLEQDLEKEVVAEAVAEWK--SQKEAG-------LLKDVEEEEDIYAVEEESDEEETGESKMETEEGQQQFIAHVPVPSQKEVEEALLRRKKMELLQKYA 262
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|552825547|ref|XP_005846841.1| (hypothetical protein CHLNCDRAFT_31371 [Chlorella variabilis] >gi|307106494|gb|EFN54739.1| hypothetical protein CHLNCDRAFT_31371 [Chlorella variabilis]) HSP 1 Score: 266.929 bits (681), Expect = 6.468e-86 Identity = 134/275 (48.73%), Postives = 191/275 (69.45%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELP----GGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKY 271 MARNEEKAQ+MLN+WL K+ GD+E+RP+L+S+CH L+EA++WR+QI++E+ +KV ++QNAGLGEHR+RDLND+INKL+REK HW++RI ELGGPDY+++ P+ D++GR L G GYRYFGAAK LPGV+ELF++ AP+++RRTR +M++ ID DYYG+RDEEDGIL + E EAE A+ +++++ E + + G E G A AAT+ A+VP+P Q++I ++E KK+ LL +Y Sbjct: 1 MARNEEKAQSMLNRWLAGKQQEVKGDREKRPYLASECHDLNEADKWRQQILREIGRKVMDIQNAGLGEHRIRDLNDEINKLIREKGHWERRIVELGGPDYSKVGPKVTDSEGRSLVEAAGRGAGYRYFGAAKQLPGVRELFEREAPRQVRRTRAEMHRAIDADYYGFRDEEDGILEKVEAEAEAPMRRQAIDEWEEKEAERQAAFADVRGGMPE-------------GGAADAGGQGAREAATATQFVAYVPLPDQKEIEQKVLESKKQQLLKQY 262
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|1191023161|ref|XP_020894265.1| (pre-mRNA-splicing factor ISY1 homolog [Exaiptasia pallida]) HSP 1 Score: 266.544 bits (680), Expect = 7.617e-86 Identity = 139/278 (50.00%), Postives = 190/278 (68.35%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMK-KDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAAT------SAAVKAHVPVPCQEDIMTALMEKKKRALLSKY 271 MARN EKA ML++W +K K+ G ERRPFL+++C L EAE+WR QII+EV KKV+++QNAGLGE R+RDLND+INKLLREK HW+ RI ELGGP+Y +I P+ D +G+E+PG GY+YFGAAK+LPGV+ELF++ PK R+TRG++YK +D DYYGYRDE+DG+L+ E+E EK+AIA A+ +++ + KE+E EE + I A + G+ AT S + HVPVP Q+++ L+++KK LL KY Sbjct: 1 MARNAEKAMTMLSRWYDVKRKEAGKGIPERRPFLATECDNLQEAEKWRHQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIVELGGPNYKKIGPKMLDHEGKEVPGNRGYKYFGAAKELPGVRELFEQEPPKAPRKTRGELYKDVDADYYGYRDEDDGVLVPIEQEVEKDAIARAIEEYQAK---------------KEQEMEEDDEEEEDIYAVQPEQEGSDEEMATDEGGEGSQSFVXHVPVPSQQEVEQMLVQRKKMELLDKY 263
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|196004170|ref|XP_002111952.1| (hypothetical protein TRIADDRAFT_23391 [Trichoplax adhaerens] >gi|190585851|gb|EDV25919.1| hypothetical protein TRIADDRAFT_23391 [Trichoplax adhaerens]) HSP 1 Score: 260.381 bits (664), Expect = 1.294e-83 Identity = 127/246 (51.63%), Postives = 179/246 (72.76%), Query Frame = 0 Query: 27 KERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG 272 +ERRPFL+SDC L AE+WRR+II+E+ KKV+++QNAGLGE RLRDLND+INKLLREK +WQ RIKELGGPDY ++ P+ D +G+E+PG GY+YFGAAKDLPGV+ELF++ P++ RRTRG++Y+ +D DYYGYRDE+DG+++ E+EAE +AAAV+++ A +E+GE E++EE+ + A +A T G + + + HVPVP Q+++ L+++KK LL KY Sbjct: 7 QERRPFLASDCDDLPAAEKWRREIIREIAKKVAQIQNAGLGEFRLRDLNDEINKLLREKRYWQDRIKELGGPDYAKVGPKMLDREGKEVPGNRGYKYFGAAKDLPGVRELFEQEKPEKPRRTRGELYRHVDADYYGYRDEDDGVIVPLEKEAEASLVAAAVKEWN--AMKERGE-------IPEDKEEQNIYA---VADTNDNDNGEQSKDKSDQSFAVHVPVPSQKEVEELLVKRKKMELLHKYS 240
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|524881944|ref|XP_005097618.1| (PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Aplysia californica]) HSP 1 Score: 259.225 bits (661), Expect = 9.933e-83 Identity = 139/281 (49.47%), Postives = 192/281 (68.33%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEE----------GAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKY 271 MARN EKA L +W + +K+RRP+L+SDC L EAE+WRRQII E+++KV+++QNAGLGE +LRDLND+INKLLREK HW+ RI ELGGPDY + P+ D+DG+E+PG GY+YFGAAKDLPGV+ELF++ P R+TR ++ K ID DYYGYRDE+DGI++ +E EAE++AI++ VR++K++ + K GE TEE A E E++ + + + TES + + AHVPVP Q++I AL+ +KK LL +Y Sbjct: 1 MARNSEKAMTTLARWRASQVG-EIKEKDRRPYLASDCDNLHEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRILELGGPDYRKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPQELEAERKAISSKVREWKEKQNKVKS-GEMTEEEATGKEEELFTAAELAEDDLEVQEVEMEPTESTSD----LDLDNQRFIAHVPVPSQKEIEAALLMRKKMELLQRY 275
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|760448739|ref|XP_011401438.1| (Pre-mRNA-splicing factor ISY1-like protein [Auxenochlorella protothecoides] >gi|675355983|gb|KFM28423.1| Pre-mRNA-splicing factor ISY1-like protein [Auxenochlorella protothecoides]) HSP 1 Score: 257.684 bits (657), Expect = 2.556e-82 Identity = 137/276 (49.64%), Postives = 191/276 (69.20%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGR---ELPG-GGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKYG 272 MARNEEKAQ+MLN+ L K+ A ++++RP+L+++C L+EA++WR+QI++E+ KKV E+QNAGLGEHR+RDLND+INKL+REK HW++RI ELGGPDY++ PR D++GR E G G GYRYFGAAK+LPGVKELF+K AP+++RRTR +MY+ I+ DYYG+RDE+DG+LL+ E EAE + A A + +E E++E S AA + A A ++ A+VP+P ++I ++E KK ALLSKY Sbjct: 1 MARNEEKAQSMLNRLLAAKQADARPERQKRPYLATECTDLNEADKWRQQILREIGKKVMEIQNAGLGEHRIRDLNDEINKLMREKVHWERRIVELGGPDYSKTGPRVTDSEGRVMAETSGRGAGYRYFGAAKNLPGVKELFEKEAPRQVRRTRAEMYRLINGDYYGFRDEDDGVLLKVEAEAEAQLRAQA-----------------SLRAIQEWEQQEAQRQSSAAAARGTSATVQVDPAESAPQFVAYVPLPDAQEIEARVLEGKKAALLSKYA 259
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|45360697|ref|NP_989022.1| (ISY1 splicing factor homolog [Xenopus tropicalis] >gi|38174132|gb|AAH61420.1| hypothetical protein MGC76019 [Xenopus tropicalis]) HSP 1 Score: 256.144 bits (653), Expect = 1.086e-81 Identity = 137/272 (50.37%), Postives = 185/272 (68.01%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGD-KERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKY 271 MARN EKA L ++ + L G KERRPFL+S+C+ L +AE+WRRQII E++KKV+++QNAGLGE R+RDLND+INKL+REK HW+ RIKELGGPDY RI P+ D +G+E+PG GY+YFGAAKDLPGV+ELF+K R+TR ++ K ID +YYGYRDE+DG+L+ E+E EK+AI A+ ++++ G+ EEEEE + A + + + GA + AHVPVP Q++I AL+ +KK LL KY Sbjct: 1 MARNAEKAMTALARF--RQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLIREKGHWEVRIKELGGPDYGRIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKSIDAEYYGYRDEDDGVLVPLEQEEEKKAIGEALEKWRQEKEARLANGDRN-----EEEEEVNIYAVAADESGDDSDSGAEGEEGQQKFI-AHVPVPTQKEIEEALIRRKKMELLQKY 264
BLAST of EWM23267.1 vs. NCBI_GenBank
Match: gi|89268274|emb|CAJ81535.1| (novel protein similar to isy1 [Xenopus tropicalis]) HSP 1 Score: 256.144 bits (653), Expect = 1.224e-81 Identity = 137/272 (50.37%), Postives = 185/272 (68.01%), Query Frame = 0 Query: 1 MARNEEKAQAMLNKWLTMKKDLATGD-KERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEEGAKEEEEEERLLAQSLIAATESVAGGAAASAATSAAVKAHVPVPCQEDIMTALMEKKKRALLSKY 271 MARN EKA L ++ + L G KERRPFL+S+C+ L +AE+WRRQII E++KKV+++QNAGLGE R+RDLND+INKL+REK HW+ RIKELGGPDY RI P+ D +G+E+PG GY+YFGAAKDLPGV+ELF+K R+TR ++ K ID +YYGYRDE+DG+L+ E+E EK+AI A+ ++++ G+ EEEEE + A + + + GA + AHVPVP Q++I AL+ +KK LL KY Sbjct: 1 MARNAEKAMTALARF--RQAQLEEGKVKERRPFLASECNDLPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLIREKGHWEVRIKELGGPDYGRIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKSIDAEYYGYRDEDDGVLVPLEQEEEKKAIGEALEKWRQEKEARLANGDRN-----EEEEEVNIYAVAADESGDDSDSGAEGEEGQQKFI-AHVPVPTQKEIEEALIRRKKMELLQKY 264 The following BLAST results are available for this feature:
BLAST of EWM23267.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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