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Properties
| Property Name | Value |
|---|
| Product | Ankyrin repeat-containing domain protein |
| Orig transcript id | gnl|cribi|Naga_100181g2.3853.mrna |
| Orig protein id | gnl|cribi|Naga_100181g2.3853 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:533240..535127 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7413 ID=rna7413|Name=rna7413|organism=Nannochloropsis gaditana|type=mRNA|length=1124bp
CGTTTCCCCCTCAAATGACGATGCTGCAACAGAAGGATGGATAGTAGGGG
ATATATTTCCCACACGCAAAGTTACCGTCAATTTGTGAAAGCAGCGTCTT
TGCATTTTTTCGCACGACGAAGCGCTTTGCACCGAACAGTTTCTCCGAAA
CCTTCTCATGCATAATGACTCTCACTTTTTCGATCTCTCCGTTTTTCGCA
GCTTTTCAACAGGTTTTCCTTGCTTGGAAGAATGCTACGTCCCTGTTCCC
TTTCCCACCCAGGTCCTACCTCCCTTGTGCAGAATCACCTCCTGCCACAA
ACCTGCTCCCGTCCCACAAGACTCACGCTGACATCGACAAAGAGAGTCTT
GACCCTCAGACGTGGTTCACGCTTCTTGGCATTCCTCTCCTTCGTGGCCT
CTACCACTCAAGACCTCAGACGGCTCTCCTCGTCTTCCTACTGCTCTCCA
GCCTCACGCCGTCGACCCCTACCTTCCTTCCCTTCCACCCACCTCCGCAA
AGAGGAGTACAACACTCGTAGAAAGGACAGTGGCGATGGGGATGACTTTA
TCCCGAAGGCGTTGGGCTCAATAGGGGGAGAAATCACCTTCAACGGCGCT
CTCGGGTTCGGGGCTGGATATACGCTCAAAAAAATTGGGAAAATGGCAGC
GATCTTCTTAGGGGTAGCTTTTATTGCCTCCCAATCATTGGGTCGTATGG
GATATGTCGAGGTCAACTGGAAAAAAATCGAAGGCGAAGTTTTGAAGTTT
CTGGATCTGGACGGAGACGACAAATTAACCGTGAAGGATGTCGCGCTGTA
CTGGGACAAAATGAAGAGAGTGCTCATGCATAATCTACCGTCCACCGCGA
CCTTCACGGCAATGTTTGTGCTGGGCCTTCAAAAAGGCTAGAGGTGGGAA
GTGGGAAGGGGACGGAGGAGGGAAACGGCTGAGAAATGATGAGTGTGGAG
TGTATGGATATCGCGTTGGGGAGCTGTGAGATGACGGCCAGCGTTCCGAA
GCATAATGCCAGCGTTTGCGAAATCAACAGACTGCCTTGAGCAACATCCT
CGATCTCGGGTGCGTCGCCCACCCCGTGCATGCGCTGTAAAGTCGAATCG
AATGTAAATCTTTTCATCGTCCAG back to topprotein sequence of rna7413 >rna7413-protein ID=rna7413-protein|Name=rna7413|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MPFVTASKLTLSVLFSSVTRAVTFSCVVCPPFRPLSPIVLAMSAASSSSK
SSCSSSSSLPSDSTSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDS
EGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYA
PIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAF
LIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRR
YANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSA
GVSQTCDLPG back to topmRNA from alignment at CM002471.1:533240..535127+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7413 ID=rna7413|Name=rna7413|organism=Nannochloropsis gaditana|type=mRNA|length=1888bp|location=Sequence derived from alignment at CM002471.1:533240..535127+ (Nannochloropsis gaditana)
gtcgCTAATGTCAGTAATGGCTTGGCAGCTACACATGGATTGACATGATA
AGTCCGAGGAATGAGGGCACGATAATCGATTTCAAGGTACAGAAGTTTTA
TACATAAGGGCACATTCATGTGAGTCGGGACCAGAGATGGGCCCGGGAGA
GGATCGAGACGACTGCAACTGGGCTACTGAGAAAGGGTTTGTTCACTATC
AAAGCACCGGACGCAATCCCTTGGCAGAAGAGAGAGTGTATGTCAAGCCT
CGTTTGTTATCGAGTTTCTTGTGCGTGTCCACCAAACATTTCGGTGCCGC
AATGTACGACGTCTGGGAGAGTAGATCACACTTGGGGGGCACGTCAGGGA
AATTTTGGAAGGGGACATGCCACGTAAGTGAGGGAATTTTCGCTTTATGC
ACGTATCTGCCACCAATATCTCCGTCAATGTGTGCTCTTATATGGCACAT
GACATGTTTTTGCTCAGTCCTTTTGTTGATTGACTCTTTTTGAGGTGTTA
TGAGCCTTAATACTCCCCTGTAACCTCCCTGTTCTCTTCTGACTCTTCTA
GGCCCGAAGCAATTTGGATGCCCTTCGTCACCGCTTCGAAACTCACCCTG
AGTGTACTCTTCTCGTCGGTGACGCGTGCCGTAACGTTTTCCTGTGTCGT
TTGTCCGCCTTTCCGTCCCCTCTCGCCCATCGTCCTTGCCAtgtctgccg
cctcctcctcctcgaagtcctcctgctcttcttcctcttccttaccTTCC
GACTCTACAAGCACCTCTTGCACTTCTTATGTCCGTGCAGACGGCGTCCG
CATGAATTACGATCCATACACGCCCGAAATGCGGGCCAAATACGGAGCTC
CAGGCCGCACGGACAGTGAGGGATTCGATCCGTACAGTGATAGTGTCGGT
CCAGGCATATACGGAGGAAATGTGAAGCGGGACGCCGACGGAAAGATAGT
GGTTGGAGACCAATATCAAGGACACAATCCTCGTCCGGGCCCAGTCTACG
CCGGAGGAGGATACGCCCCTATTGTGGAGGCAATGCGCTTGGGACCCGAT
GCTTTGAACGACCTCTTAGACGCCTGTCCTGAGGCAGTGAACGAAGTGAC
CACCGGGGGGGCCACACCGTTGCACATGGCTGGCATGAGCCAGCGCAATC
AGAAAGGAACTGCCTTCTTGATcgcacgtggaggagacaTGTAGGTGGTG
GagcggaaaggaagaaagatggCGAGGGCATTTGGGAGGCTGAAAGGGCC
CGCACATGCGTGATACACGTAGACACTGCGATTATTTTTCTACTTCAGTA
ATGGTGACAGAGACAAGTGTCAGCAACTGAAAGGCGGTGCACAGAGTTGT
ACAATGAATGAACATTCATGTCTCCAATTCACTCATTCCATCACCCAGAG
AGGCTGTCGACACCTACGGTTATCGCCCTTTGCATCGAATGGCCAGTAAC
AATCTCGCTGTAGGCGCAGCAGCACTTCTTGACGCTGGAGCTGATCCCAA
AGCCCCTGCTGGGATTAAAAGGCGTTATGCCAATGCGGGGAATAAAGGAG
AGACAGATGTGGAAGACACGGAATCAGGAGAGACTCCCATGGATGTGGCT
CGTTCGGCCGGAGCGTGGGACGTGGTGCAACTCCTTCTGCCGTACTACAC
CTCAGGCTCCCGCGCCTCTTCAGCGGGTGTCTCACAAACTTGTGACCTTC
CTGGATAATGTCGAGGATGACAGTATTTTTTTCAATGCTCACCATTATTT
GGAAAATATCAATGCTGTGAAGTCTGTTGTTCATTCATTTGGTTTGTTTC
CTCTGTTTTGAAATAAACATGGAAGATCTGTGTGCGCTCAATTTATGGTG
TTGAGTAGAATTCCACCGCAGTATAAATCAATGATTTC back to topCoding sequence (CDS) from alignment at CM002471.1:533240..535127+ >rna7413 ID=rna7413|Name=rna7413|organism=Nannochloropsis gaditana|type=CDS|length=1866bp|location=Sequence derived from alignment at CM002471.1:533240..535127+ (Nannochloropsis gaditana)
ATGCCCTTCGTCACCGCTTCGAAACTCACCCTGAGTGTACTCTTCTCGTC
GGTGACGCGTGCCGTAACGTTTTCCTGTGTCGTTTGTCCGCCTTTCCGTC
CCCTCTCGCCCATCGTCCTTGCCAtgtctgccgcctcctcctcctcgaag
tcctcctgctcttcttcctcttccttaccTTCCGACTCTACAAGCACCTC
TTGCACTTCTTATGTCCGTGCAGACGGCGTCCGCATGAATTACGATCCAT
ACACGCCCGAAATGCGGGCCAAATACGGAGCTCCAGGCCGCACGGACAGT
GAGGGATTCGATCCGTACAGTGATAGTGTCGGTCCAGGCATATACGGAGG
AAATGTGAAGCGGGACGCCGACGGAAAGATAGTGGTTGGAGACCAATATC
AAGGACACAATCCTCGTCCGGGCCCAGTCTACGCCGGAGGAGGATACGCC
CCTATTGTGGAGGCAATGCGCTTGGGACCCGATGCTTTGAACGACCTCTT
AGACGCCTGTCCTGAGGCAGTGAACGAAGTGACCACCGGGGGGGCCACAC
CGTTGCACATGGCTGGCATGAGCCAGCGCAATCAGAAAGGAACTGCCTTC
TTGATcgcacgtggaggagacaTAGAGGCTGTCGACACCTACGGTTATCG
CCCTTTGCATCGAATGGCCAGTAACAATCTCGCTGTAGGCGCAGCAGCAC
TTCTTGACGCTGGAGCTGATCCCAAAGCCCCTGCTGGGATTAAAAGGCGT
TATGCCAATGCGGGGAATAAAGGAGAGACAGATGTGGAAGACACGGAATC
AGGAGAGACTCCCATGGATGTGGCTCGTTCGGCCGGAGCGTGGGACGTGG
TGCAACTCCTTCTGCCGTACTACACCTCAGGCTCCCGCGCCTCTTCAGCG
GGTGTCTCACAAACTTGTGACCTTCCTGGATAAATGCCCTTCGTCACCGC
TTCGAAACTCACCCTGAGTGTACTCTTCTCGTCGGTGACGCGTGCCGTAA
CGTTTTCCTGTGTCGTTTGTCCGCCTTTCCGTCCCCTCTCGCCCATCGTC
CTTGCCAtgtctgccgcctcctcctcctcgaagtcctcctgctcttcttc
ctcttccttaccTTCCGACTCTACAAGCACCTCTTGCACTTCTTATGTCC
GTGCAGACGGCGTCCGCATGAATTACGATCCATACACGCCCGAAATGCGG
GCCAAATACGGAGCTCCAGGCCGCACGGACAGTGAGGGATTCGATCCGTA
CAGTGATAGTGTCGGTCCAGGCATATACGGAGGAAATGTGAAGCGGGACG
CCGACGGAAAGATAGTGGTTGGAGACCAATATCAAGGACACAATCCTCGT
CCGGGCCCAGTCTACGCCGGAGGAGGATACGCCCCTATTGTGGAGGCAAT
GCGCTTGGGACCCGATGCTTTGAACGACCTCTTAGACGCCTGTCCTGAGG
CAGTGAACGAAGTGACCACCGGGGGGGCCACACCGTTGCACATGGCTGGC
ATGAGCCAGCGCAATCAGAAAGGAACTGCCTTCTTGATcgcacgtggagg
agacaTAGAGGCTGTCGACACCTACGGTTATCGCCCTTTGCATCGAATGG
CCAGTAACAATCTCGCTGTAGGCGCAGCAGCACTTCTTGACGCTGGAGCT
GATCCCAAAGCCCCTGCTGGGATTAAAAGGCGTTATGCCAATGCGGGGAA
TAAAGGAGAGACAGATGTGGAAGACACGGAATCAGGAGAGACTCCCATGG
ATGTGGCTCGTTCGGCCGGAGCGTGGGACGTGGTGCAACTCCTTCTGCCG
TACTACACCTCAGGCTCCCGCGCCTCTTCAGCGGGTGTCTCACAAACTTG
TGACCTTCCTGGATAA back to top
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