EWM23278.1, cds7396 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|585104282|gb|EWM23278.1| (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0 Query: 1 MPFVTASKLTLSVLFSSVTRAVTFSCVVCPPFRPLSPIVLAMSAASSSSKSSCSSSSSLPSDSTSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSAGVSQTCDLPG 310 MPFVTASKLTLSVLFSSVTRAVTFSCVVCPPFRPLSPIVLAMSAASSSSKSSCSSSSSLPSDSTSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSAGVSQTCDLPG Sbjct: 1 MPFVTASKLTLSVLFSSVTRAVTFSCVVCPPFRPLSPIVLAMSAASSSSKSSCSSSSSLPSDSTSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSAGVSQTCDLPG 310
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|551673827|ref|XP_005839669.1| (hypothetical protein GUITHDRAFT_84668 [Guillardia theta CCMP2712] >gi|428183832|gb|EKX52689.1| hypothetical protein GUITHDRAFT_84668 [Guillardia theta CCMP2712]) HSP 1 Score: 260.381 bits (664), Expect = 1.659e-83 Identity = 128/226 (56.64%), Postives = 159/226 (70.35%), Query Frame = 0 Query: 65 STSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPY 290 S + + Y R DGVR+ +DPY+P M KYGAPG TDS+GFDPY+D+VGPGIYGG VKRDA GK+++G QYQ HNPRPGP+Y+G GY + A+ GP+A+ LL+ P V+E++TGGATPLHMAGMS++NQ T LIA GG+IEA DTYGYRPLHRMASNNL +GA ALL AGAD A T+SGETP+ +AR + A V+ +L Y Sbjct: 22 SANGSQYYRKDGVRIVHDPYSPGMADKYGAPGETDSDGFDPYADTVGPGIYGGKVKRDAQGKVLIGRQYQNHNPRPGPIYSGEGYTEMSRALSSGPEAVKKLLELDPSLVHEISTGGATPLHMAGMSRKNQLSTELLIASGGNIEAEDTYGYRPLHRMASNNLDIGAEALLKAGADGAA--------------------RTQSGETPLSIARQSSAKGVISVLNKY 227
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|873223063|emb|CEM29744.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 252.677 bits (644), Expect = 5.696e-80 Identity = 133/267 (49.81%), Postives = 167/267 (62.55%), Query Frame = 0 Query: 26 CVVCPPFRPLSPIVLAMSAASSSSKSSCSSSSSLPSDSTSTSCT-SYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESG-ETPMDVARSAGAWDVVQLLLPY 290 C+ RP + S++ ++ CS+S++L S S++ Y R DGVR+ +DPY M YGA G TD EGFDPY+D+VGPGIYGG VK+D G++V G QYQ HNP PGPVYAGGGYAPI+EA+ G +A+ ++L P A+ E TTGGA PLHM GMSQRNQ T FL+ +G D VDTYGY PLHRMASNNLA+GA ALL+ G P P T+ G ETPM +AR + A DV+ +L Y Sbjct: 9 CLFLASVRPSAFASPPPSSSCATQGGLCSTSATLTRMSASSAAAREYYRKDGVRIQHDPYAKGMAEHYGAQGNTDPEGFDPYADTVGPGIYGGKVKKDEKGEVVYGRQYQNHNPNPGPVYAGGGYAPIIEALSKGKEAVEEILAISPSALEEETTGGARPLHMCGMSQRNQLMTEFLLDKGADPNVVDTYGYTPLHRMASNNLAIGARALLERGVSPTQP--------------------TKHGHETPMSIARGSAARDVIAVLQEY 255
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|397640334|gb|EJK74063.1| (hypothetical protein THAOC_04284 [Thalassiosira oceanica]) HSP 1 Score: 236.498 bits (602), Expect = 1.447e-72 Identity = 121/223 (54.26%), Postives = 148/223 (66.37%), Query Frame = 0 Query: 65 STSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLL 287 ST Y R DGVR+ +DP+ P M KYG PG+TD+EGFDPY+DSVG GIYGG VKRDADG+IV+G QYQGHNPRPGPVY+GGGY P + + L LL P+ VN+VTTGGA PLHM GMS+ Q + L+ RG DIEA+DTYG+ PLHRMASNNLA GA LL+AGAD + ++G TPM +AR + A V+++L Sbjct: 2 STGAEDYYRHDGVRITHDPFAPGMAEKYGLPGKTDNEGFDPYADSVGAGIYGGIVKRDADGEIVIGRQYQGHNPRPGPVYSGGGYTPSTKMLTDIEGQLKPLLGRFPDLVNDVTTGGAQPLHMCGMSKSKQHAVSELVVRGADIEALDTYGFTPLHRMASNNLAEGARMLLEAGADVSSTG--------------------KAGATPMSIARESRATAVMKVL 204
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|255078036|ref|XP_002502598.1| (hypothetical protein MICPUN_113339, partial [Micromonas commoda] >gi|226517863|gb|ACO63856.1| hypothetical protein MICPUN_113339, partial [Micromonas commoda]) HSP 1 Score: 222.246 bits (565), Expect = 3.184e-67 Identity = 144/277 (51.99%), Postives = 171/277 (61.73%), Query Frame = 0 Query: 25 SCVVCPPFRPLSPIVLAMSAASSSSKSSCSSSSSLPSDSTSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEA-------MRLGP----DALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPY 290 S +CP R L A+ AAS ++S S +++PS SY R DGV++ +DPY P M AKYGAPG+TD++GFDPY+DSVG GIY G V+R ADG +V+G QYQGHNPRPGPVY+GGGY PI EA MR G L LLDA P+ VN+V TGGA+PLH GMS+ NQ TAFLIARG D+ A+DTYGY PL RMASNNLAVGAAALL GA+P A P DVA A A DV+ +L Y Sbjct: 4 SWRLCP--RTLLLFTSAVHAASPV-RASTSCRAAMPS--------SYYRKDGVKITHDPYAPGMAAKYGAPGKTDADGFDPYADSVGAGIYSGTVQRAADGSVVIGRQYQGHNPRPGPVYSGGGYTPISEAISRFHAEMRSGAAETDTTLAKLLDAHPDLVNDVATGGASPLHTCGMSRSNQHATAFLIARGADLAAMDTYGYTPLDRMASNNLAVGAAALLAFGAEPDAHG------------------------PPFDVAMDAEAKDVLAVLEKY 245
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|303284695|ref|XP_003061638.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226456968|gb|EEH54268.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 216.468 bits (550), Expect = 7.855e-66 Identity = 129/270 (47.78%), Postives = 159/270 (58.89%), Query Frame = 0 Query: 63 STSTSCTSYVRADGVRMNYDPYTPEM--------------RAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRD-ADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRL----------GPDA-LNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSAGVSQTC 306 S+S++ ++ RADGVR+ +DP+ P M R KYGAPG TD +GFDPY+DSVG GIYGG VKR DG +V+G QYQGHNPRPGPVYAGGGY P+ +A+ P+ L LLDA P+ VN+V+TGGA+PLH GMS+ NQ TAFLI+RG D++AVD YG+ PL R ASNNLA+ A ALL GADP A P DVA + A DV++ L G R S G S+T Sbjct: 2 SSSSAKAAHYRADGVRITHDPHAPGMAEVHSIHWSPYDRVRVKYGAPGETDRDGFDPYADSVGAGIYGGVVKRRPEDGSVVIGKQYQGHNPRPGPVYAGGGYTPVSDAIATFNREVSGGVPTPETTLAKLLDAHPDLVNDVSTGGASPLHTCGMSRANQHATAFLISRGADVDAVDAYGFTPLDRAASNNLAIAAEALLKRGADPDANG------------------------PPRDVATQSEARDVLKALDARAKEGGRVDS-GASRTL 246
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|1210528369|dbj|GAX13058.1| (hypothetical protein FisN_2Hh603 [Fistulifera solaris]) HSP 1 Score: 213.001 bits (541), Expect = 4.257e-65 Identity = 103/180 (57.22%), Postives = 124/180 (68.89%), Query Frame = 0 Query: 64 TSTSCTSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKA 243 T Y RADGVR+ +DPY P M KYG PG T+ +GFDPY+D+VGPGIYGG+V+R+ DG IV+G QYQ HN RPGPVY G GY+ + A+ GPD + +L E E++TGGA PLHM GMSQ+ Q T LI G D+ A DTYGY P+HRMASNNLA+G AL AG DP A Sbjct: 2 TQKQENEYYRADGVRITHDPYAPGMAEKYGLPGETNPDGFDPYADTVGPGIYGGSVERNKDGTIVIGQQYQNHNHRPGPVYDGRGYSLMSRAIHAGPDKVKAILADYLELREEISTGGARPLHMCGMSQKGQLCTQALIDAGADLHAQDTYGYTPMHRMASNNLAIGGEALARAGVDPNA 181
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|1210530302|dbj|GAX11066.1| (hypothetical protein FisN_2Lh603 [Fistulifera solaris]) HSP 1 Score: 208.764 bits (530), Expect = 1.686e-63 Identity = 101/174 (58.05%), Postives = 121/174 (69.54%), Query Frame = 0 Query: 69 TSYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPK 242 Y RADGVR+ +DPY P M KYG PG T+ EGFDPY+D+VGPGIYGG+V+R DG IV+G QYQ HN R GPVY G GY+ + A+ GP+ + +L PE E++TGGA PLHM GMSQ+ Q T LI G D+ A DTYGY P+HRMASNNLA+G AL AG DP Sbjct: 7 NEYYRADGVRITHDPYAPGMAEKYGLPGETNPEGFDPYADTVGPGIYGGSVERYEDGTIVIGQQYQNHNHRLGPVYDGRGYSLMSRAIHAGPEKVKAILADYPELREEISTGGARPLHMCGMSQKGQLCTQALIDAGADLHAQDTYGYTPMHRMASNNLAIGGEALARAGVDPN 180
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|1072235307|gb|OEU20036.1| (hypothetical protein FRACYDRAFT_217021 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 206.453 bits (524), Expect = 1.003e-62 Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0 Query: 70 SYVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADP 241 + R DGV+++YDPY M KYG PG TD+EGFDPY+DSVG GIYGG VKRD +G IV+G+QYQ HN RPGPVY G GY+ + +A+ GP+ + ++L PE E++TGGA PLHM GMS NQ T LI D+ A DTYGY LHRMASNNL VG AL+ AG DP Sbjct: 2 EHYRKDGVKIDYDPYAKGMAEKYGLPGNTDNEGFDPYADSVGAGIYGGCVKRDNEGNIVIGEQYQNHNNRPGPVYDGRGYSLMSKAIHAGPEKVTEILKDYPELKEEISTGGARPLHMCGMSSNNQLSTQSLIDAKADLYAQDTYGYTALHRMASNNLDVGGEALVRAGHDP 173
BLAST of EWM23278.1 vs. NCBI_GenBank
Match: gi|224003505|ref|XP_002291424.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973200|gb|EED91531.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 200.29 bits (508), Expect = 5.407e-60 Identity = 112/216 (51.85%), Postives = 133/216 (61.57%), Query Frame = 0 Query: 88 MRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDAD-GKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGSRASSAGV 302 M KYG PG+TD EGFDPY DSVG GIYGG V+R ++ G+IV+G QYQ HNPRPGPVYAGGGY P A+ L LLD P+ VN++TTGGA PLHM GMSQ Q L+ RG DIEA+DTYG PLHRMASNNLA GA LL+AGAD N+G+ G +PM +A+ + A V +L + S S A V Sbjct: 1 MADKYGRPGKTDDEGFDPYRDSVGAGIYGGIVQRHSETGEIVIGQQYQNHNPRPGPVYAGGGYTPCTLALGDVQRKLIPLLDKYPDLVNDITTGGAQPLHMCGMSQGKQHSVQALVERGADIEALDTYGMTPLHRMASNNLADGARMLLEAGAD-------------VFNEGKI-------GISPMSIAKGSAARAVTNVLYEFAKLNSTGSKANV 196 The following BLAST results are available for this feature:
BLAST of EWM23278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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