rna7406, rna7406 (mRNA) Nannochloropsis gaditana

Overview
Namerna7406
Unique Namerna7406
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1656
Alignment locationCM002471.1:501261..501824 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100158g3.7791.mrna
Orig protein idgnl|cribi|Naga_100158g3.7791
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:501261..501824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100158g3gene7165Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7406rna7406-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23295.1cds7389Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7406 ID=rna7406|Name=rna7406|organism=Nannochloropsis gaditana|type=mRNA|length=1656bp
ATGCATCGTGTTGCCTTCGGCGCAATGGCCTTGGCGAGCCTATCCGCCTA
CACAAGTGCAGGATCCGTGGAGGAGTGCCTCGCACCCGCGACATTCAGTG
CATCCAAAGACTATTTCCCTTCCGCGGCCGGTGCCACCGTCGATGAAGCC
CGTAAGTTTACTATTGAATACGATCAGGGGTACAAAGTGGTGACCAACAA
GGCAGGCAAGCGACAGTACGTGCTCTATCGGTGCGGAGCCCCCGAGCCGG
ATGTCAGCGCTCTGACCCTCCCTGCCGGCTATGAGCGCCGCATCCTTTCC
GTGCCCGCCCAGAAAGCTGTAACGGCTGAAACTGTCAGCTACGACTTTCT
GAACCTCCTTCAGAACGACAAGACGGACATGGGCGTGACCGATCGTCTCA
TCTCGCTTTCTCCGTACTCCGTGGATGCCTGTGCTCAAAAAGCTCTGACC
TGCAGCAACAATGTCATGTCCCCTGGTTTGAATGCAGCGGTGCCCGGCTG
GGGCGCCAAACCGGAAGAATATGATGCCCTGATGAACGAGGCCAATGTCT
ACTTCGATTTCTCGGAGTCTTACAAGGGGACGGGTGCCACGGATAAAACA
GTCATCTTCTCTGCCACCTCAGAGACCAGCTTGTTGGGGCGCGGGGAGTG
GCTCAAGTTTGCAGCTGCTTTTTTCAACCTGGACGGCGTGGCAGAGCAGA
AGTTTGATCGGACCCGGGAGAAGTACTACGAGCTCTCGGATGCCGCCAAG
GCCAATCCGAGCCGCCCCAAAGTGTCTTTCGTGAACGTCGACACGTACGG
TGACAGTACCGTGGATTACTTTATGATCGATGTGGCTGGCTACAAAAGAA
GCGCGGTCCTGGATGCCGGTGGATACATTGCCAATGTGGAAGACTTTGTG
GGCGCCCCTAATGTGAGCTTCCCGAGCACCATGCGGGCCGCCAGATGGGC
CGTGCCGAAGGAAGCCGGGGCAGAGAGGGAGGCGGCCATCAAGGCCTTCG
CCGCCAACCTGAAAGACACGGACATCCTGATCGACGAACGCTACTCCCCT
TCCGTCCTCTCGCGCGACGAGTCCCTGGCCGCCTACGGTCTCTCTGGTAA
CGACATGGAGTACCCATTCATCGCGCACGGGAAACTCTACCGCGAGGACC
GAACCGGCTCGGCCACAGGCAGCGCCTGGTTCGAATCGGGCGTCTCGCGT
CCCGACATTGTCCTGATGGATTTCATCAAGGTCATCCAGCCTTCCACGCC
TGCCGTTGCCAGCCACGAGCGAGTCTTTCTGCGCGACTTGGCACAGGGAG
AGACCAAGCAGGTTGTGACGGCGGCGGAATGCGAGCGGGGCTACCCCGTA
TGCGGCTTGTCTTTGGCAGACAAGGCTGCCGCCATTTGTCCCAGTGACCA
ATTTAAGACCTGCTCGGACGGCAGCAAGGTCTTTTTGACCCCCTCCTCGG
ACTGCACGCGCTTCCAGGCCTGTCCCATGCGCAGCATGAGCGACTACACC
GGGCTCCCCGCTTCGTCCAACATCATCTTGGCCGTGTTTATGTCTTTCGT
CGGCCTCGTTCTGATTGCGGCAGGCTTCTACTTTGGAAGGAAAAAGGCAC
GCACCACGAGCCCCGGAGGCTTGACTCCCAATGGGAATGCTGCCACCTTG
CATTAG
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protein sequence of rna7406

>rna7406-protein ID=rna7406-protein|Name=rna7406|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
MVESEKRRGNQEALLCSCSGAREGFSCRVHAFPCKTDHKGQLAFSASDES
CETTCIPFKTHAFQEKDTNKDRSGGSISEGGGRAGNGVSFRSYKRGQSRA
SNNEREREEERQYSIRYTNFDMLFVPHPLCRPYFHPGHHPIALAYLSLHT
QHSTRYTFLPSKTKVSHSFP
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mRNA from alignment at CM002471.1:501261..501824+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7406 ID=rna7406|Name=rna7406|organism=Nannochloropsis gaditana|type=mRNA|length=564bp|location=Sequence derived from alignment at CM002471.1:501261..501824+ (Nannochloropsis gaditana)
ATGGTAGAaagcgagaagaggaggggaaatcaAGAAGCACTGCTTTGCTC
TTGTAGCGGAGCAAGAGAAGGGTTTTCATGTCGTGTACATGCTTTTCCTT
GCAAGACGGATCACAAGGGACAGCTCGCGTTCAGCGCGAGTGACGAGTCG
TGTGAGACTACTTGTATTCCTTTCAAAACCCATGCTTTTCAAGAAAAAGA
TACGAACAAAGATAGGTCAGGTGGAAGTATATCCGAAGGGGGGTAAGAAA
AATCGCGGAAAGCGTTGCGATGTGGTCATGTCGCACGGCAGAGGGGCAGG
GCTGGTAATGGAGTGAGTTTTCGATCATATAAAAGAGGACAGAGCAGAGC
TTCGAATAatgagagagaaagagaggaagaacgCCAATACTCTATACGAT
ACACCAACTTTGATATGCTTTTCGTGCCTCATCCCTTGTGCCGTCCTTAT
TTTCACCCAGGCCACCATCCTATCGCCCTGGCCTACTTGTCACTCCACAC
ACAACACTCCACACGTTATACATTTCTACCTTCCAAAACAAAAGTTTCTC
ATTCTTTCCCCTAG
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Coding sequence (CDS) from alignment at CM002471.1:501261..501824+

>rna7406 ID=rna7406|Name=rna7406|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at CM002471.1:501261..501824+ (Nannochloropsis gaditana)
ATGGTAGAaagcgagaagaggaggggaaatcaAGAAGCACTGCTTTGCTC
TTGTAGCGGAGCAAGAGAAGGGTTTTCATGTCGTGTACATGCTTTTCCTT
GCAAGACGGATCACAAGGGACAGCTCGCGTTCAGCGCGAGTGACGAGTCG
TGTGAGACTACTTGTATTCCTTTCAAAACCCATGCTTTTCAAGAAAAAGA
TACGAACAAAGATAGGTCAGGTGGAAGTATATCCGAAGGGGGGGGCAGGG
CTGGTAATGGAGTGAGTTTTCGATCATATAAAAGAGGACAGAGCAGAGCT
TCGAATAatgagagagaaagagaggaagaacgCCAATACTCTATACGATA
CACCAACTTTGATATGCTTTTCGTGCCTCATCCCTTGTGCCGTCCTTATT
TTCACCCAGGCCACCATCCTATCGCCCTGGCCTACTTGTCACTCCACACA
CAACACTCCACACGTTATACATTTCTACCTTCCAAAACAAAAGTTTCTCA
TTCTTTCCCCTAGATGGTAGAaagcgagaagaggaggggaaatcaAGAAG
CACTGCTTTGCTCTTGTAGCGGAGCAAGAGAAGGGTTTTCATGTCGTGTA
CATGCTTTTCCTTGCAAGACGGATCACAAGGGACAGCTCGCGTTCAGCGC
GAGTGACGAGTCGTGTGAGACTACTTGTATTCCTTTCAAAACCCATGCTT
TTCAAGAAAAAGATACGAACAAAGATAGGTCAGGTGGAAGTATATCCGAA
GGGGGGGGCAGGGCTGGTAATGGAGTGAGTTTTCGATCATATAAAAGAGG
ACAGAGCAGAGCTTCGAATAatgagagagaaagagaggaagaacgCCAAT
ACTCTATACGATACACCAACTTTGATATGCTTTTCGTGCCTCATCCCTTG
TGCCGTCCTTATTTTCACCCAGGCCACCATCCTATCGCCCTGGCCTACTT
GTCACTCCACACACAACACTCCACACGTTATACATTTCTACCTTCCAAAA
CAAAAGTTTCTCATTCTTTCCCCTAG
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Synonyms
Publications