EWM23295.1, cds7389 (CDS) Nannochloropsis gaditana

Overview
NameEWM23295.1
Unique Namecds7389
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:501261..501502 +
Alignment locationCM002471.1:501554..501824 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23295.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100158g3.7791.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:501261..501502 +
CM002471.1supercontigCM002471.1:501554..501824 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23295.1 vs. NCBI_GenBank
Match: gi|585104300|gb|EWM23295.1| (hypothetical protein Naga_100158g3 [Nannochloropsis gaditana])

HSP 1 Score: 353.984 bits (907), Expect = 9.891e-124
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MVESEKRRGNQEALLCSCSGAREGFSCRVHAFPCKTDHKGQLAFSASDESCETTCIPFKTHAFQEKDTNKDRSGGSISEGGGRAGNGVSFRSYKRGQSRASNNEREREEERQYSIRYTNFDMLFVPHPLCRPYFHPGHHPIALAYLSLHTQHSTRYTFLPSKTKVSHSFP 170
            MVESEKRRGNQEALLCSCSGAREGFSCRVHAFPCKTDHKGQLAFSASDESCETTCIPFKTHAFQEKDTNKDRSGGSISEGGGRAGNGVSFRSYKRGQSRASNNEREREEERQYSIRYTNFDMLFVPHPLCRPYFHPGHHPIALAYLSLHTQHSTRYTFLPSKTKVSHSFP
Sbjct:    1 MVESEKRRGNQEALLCSCSGAREGFSCRVHAFPCKTDHKGQLAFSASDESCETTCIPFKTHAFQEKDTNKDRSGGSISEGGGRAGNGVSFRSYKRGQSRASNNEREREEERQYSIRYTNFDMLFVPHPLCRPYFHPGHHPIALAYLSLHTQHSTRYTFLPSKTKVSHSFP 170
The following BLAST results are available for this feature:
BLAST of EWM23295.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104300|gb|EWM23295.1|9.891e-124100.00hypothetical protein Naga_100158g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7406rna7406Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications