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Properties
| Property Name | Value |
|---|
| Product | Cytochrome c oxidase assembly protein PET191 |
| Orig transcript id | gnl|cribi|Naga_100158g15.7786.mrna |
| Orig protein id | gnl|cribi|Naga_100158g15.7786 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:479536..480752 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7396 ID=rna7396|Name=rna7396|organism=Nannochloropsis gaditana|type=mRNA|length=451bp
TATTTCGGGGGCTTCGTCATGTGCTGCTCATAATTCAGCCTTAATGCTCA
CAGCAACCTCTCCGCATCTCTCAGACATACGTCATGAGCGCGGGCACTCC
TCCTACCATTGTCCCGGACCCTGATTACAGAGATGGCTCAAGGGAGGGAC
GATTGCGTTTCAGCAAGCGTGCGGAACAGCATCTCCGGGACGAATTAGCC
CTGCACGCACGCAAACAATGCCAGGAGCCGATGGCAGCATTTGCAGCGTG
TGCCAAAGAGAATGGGATGTTCGTGATTTTCAAGTGCCGGGCTCTTAATA
ACGCCATGAACGCGTGCTTGAGTCAGTATACGTCGGAGAGCAAGTTTGAG
GAGTGGAAGCAGACGCGAGGGCTCAGTCTCGCCGAAGAAGCTTAAAAAAA
CCACCTCGATCCGAAAACCAAAAATGAAGGCACGCCGAGGCCGGTCCCCG
A back to topprotein sequence of rna7396 >rna7396-protein ID=rna7396-protein|Name=rna7396|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MPKSCKEAAYALLACMQQQPCMKTGGSLTECLKSEDVDACSVQRNAYFLC
KRSQLDMRTRIRGTRVY back to topmRNA from alignment at CM002471.1:479536..480752+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7396 ID=rna7396|Name=rna7396|organism=Nannochloropsis gaditana|type=mRNA|length=1217bp|location=Sequence derived from alignment at CM002471.1:479536..480752+ (Nannochloropsis gaditana)
CGTCAACAAATCTTATTTCAAGCGCAGTCCTCATTACAGGCATCACAACA
GCCTCGTTCACCAGCGCTTTGGAGGTGAACCCTTCGGTGACAAATTTTGG
CTGAAACCCGacgcggcgggaggggttCCCACACGCAGGGCTTGCGGGTT
CAGATATATATTGCGGCGCACAAGAAAGCAGGCATCATTCGCTCTGGTAG
CAGCTTTGTTGGTTGAGGATTGTTGAATACACATCATTACCCACATGGTG
AGTCAAAGTTAAATTTCCTTCTTTGGCTATAGGGAGACCTACAGGTTGTA
GAGTTTACCGAGCAGCAATTACTTACTTTATCCTCCCAAATTGTTCCTTT
TTGGGGGTATGATCACGTAAATCGGGATGACGATTATTACGTTCAAGCCC
AAGTCTTGTAAGGAAGCTGCCTATGCCCTATTGGCCTgcatgcagcagca
gccctgTATGAAGACGGGAGGTTCCCTGACCGAATGCCTGAaaagcgagg
acgtggatgcTTGCTCGGTAGGTCTAccaggagaaaggggggagccCGAC
GCTTAATTTGGCTTGAATAGATGTTGGCTGTCCTATTTTATCTTCAGCAC
CTTacattttgggggggagcgTGGCAAAGCAGGCCTCTGGTCGAGGTACA
GAGAAGATTTCCAAAGTCTTCTCCCCCAGTTCCCAGCAGCTTACGGGCGT
ATGTAGAGCCCACGTTCTTTGACACGAGTCCGTTCACGCATATCACTCCC
CCATGCCCTGGAACAGGTGCAACGCAATGCGTATTTCCTCTGCAAACGCT
CGCAGCTGGACATGCGAACTCGTATAAGAGGCACGCGCGTCTACTAGAGG
CACCCGCGTCTACTTGGTCGCTCGACAAGCCAGTCTCCAGCCCTCTAATC
GATAAGTGAggttgaaaaaggagggttgtttacgaaaggaaaaagctttg
gaaaggggaaagaaaagtaCGGCTGTCCGACGTTCAGAGATAcctctctt
ttcctgcgAAAGATCCATCCAATTTgaattctttctttttctttccaatG
AATTTTCGTCACATCGTCgtgccgctgttgctgctaCTCGTTTCCCGCCT
GGAGGCTCACTCACTGCCTCGCGTTTGCTTGGCGCTTGGACTCACTCCAC
AGGTGTTCGATCCGCGCATGGGCCTCGATAACCTCGTGGCCACCAGGCTT
CCTCATCTTACCCCCTG back to topCoding sequence (CDS) from alignment at CM002471.1:479536..480752+ >rna7396 ID=rna7396|Name=rna7396|organism=Nannochloropsis gaditana|type=CDS|length=612bp|location=Sequence derived from alignment at CM002471.1:479536..480752+ (Nannochloropsis gaditana)
ATGCCCAAGTCTTGTAAGGAAGCTGCCTATGCCCTATTGGCCTgcatgca
gcagcagccctgTATGAAGACGGGAGGTTCCCTGACCGAATGCCTGAaaa
gcgaggacgtggatgcTTGCTCGGTGCAACGCAATGCGTATTTCCTCTGC
AAACGCTCGCAGCTGGACATGCGAACTCGTATAAGAGGCACGCGCGTCTA
CTAGATGCCCAAGTCTTGTAAGGAAGCTGCCTATGCCCTATTGGCCTgca
tgcagcagcagccctgTATGAAGACGGGAGGTTCCCTGACCGAATGCCTG
AaaagcgaggacgtggatgcTTGCTCGGTGCAACGCAATGCGTATTTCCT
CTGCAAACGCTCGCAGCTGGACATGCGAACTCGTATAAGAGGCACGCGCG
TCTACTAGATGCCCAAGTCTTGTAAGGAAGCTGCCTATGCCCTATTGGCC
TgcatgcagcagcagccctgTATGAAGACGGGAGGTTCCCTGACCGAATG
CCTGAaaagcgaggacgtggatgcTTGCTCGGTGCAACGCAATGCGTATT
TCCTCTGCAAACGCTCGCAGCTGGACATGCGAACTCGTATAAGAGGCACG
CGCGTCTACTAG back to top
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