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Properties
| Property Name | Value |
|---|
| Product | uv radiation resistance-associated protein |
| Orig transcript id | gnl|cribi|Naga_100053g38.5051.mrna |
| Orig protein id | gnl|cribi|Naga_100053g38.5051 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:461778..463807 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7385 ID=rna7385|Name=rna7385|organism=Nannochloropsis gaditana|type=mRNA|length=2222bp
CCAGCCCTCTTTCTGCCCTTTTTGACGTCCTCTGTGAGCATACGTGCTTT
CCAGAGTAAAATATCATATCTTTAGATATTTTCGAAGCTCCAGGCAAGAG
GAAGGTGGATTGAAAGGACAGAATTTTGTCTAATTTTGTGTGTGTCATAT
CTACAGATAAGCAAATCGGAACAGGTCGTCTGCTATTCCGAGCCACCCTT
AAGTCCAATACAAGGGACCAAAAATGCGATTGCAGCAATCTACTGTAGTA
TTATGCCTCCTTCTGGGCTACATACTCTGTTATTTTGGTTCACCTAACAC
CTCTGGTGTCATGGTGAGCGCAGCAAAGGCTCTCGAAGAGGGCGAAGAGA
AGGCTTCAGCAAGGCGTTCGAACACCCGCGGGGCAGAAGCAAAACGCATG
AGGGGGATGAAGGTGGACGTCATGGGCGGACTTGAGAGCGAGGATGATGA
CAATGAGGTTTGGGCAGAAGACGAAGACGTGGACGAGGAGGAGTATGACG
ATGACGACGAAGAAGCGGACGAGGAGGAGGAGGAAGGAGAAATTGCAGAT
GACACTGACGACGAATTAGACGATGATGAATACGACAGCATTGACGACGA
TGAGATGTTGGATGACGCGGGGGAAGAGCATGTGAAAAACGTGCAGAGGA
AAGGCAAGAAGAAGGTGAAGCCCGTTGTCTTGGACGATGTGGCAAGCAAG
GACGGAGAGCTGCGGGGGTCTCTCATCCTTGACGAGATCAGCAGCTACAT
GGTCGAGGACTTCGAAGCCCCCGGGGGCACCATCACTTACTACAAGGTGG
TGCTCCATCTCTCAAACGCCGGGCAGCGGCCCCTCTGCGGGATGACCGTG
GCGGTGCCCCCCAAGCGCGGCATGGAGATCGAGCAGCTCTGGACGATGGA
GGAGTCGGAGATCGAGGACGTCTACGACGTTTTGTGGACCGACTACGTCC
CGCCCAAGGACCCGAGGCATGGAGTGCGGTACTTCGGTCTGGTCACCAAG
GGAGCAGCGCCGAACGTGACGATCGACTCCCTCTCCCCCTGCCTGAGCGA
CTACGAGGACGACGACGAGGAGGACGCGGACCTGGACGACGACGAAATGG
AGAGCGAGGAGGAGGGCGGGGCGGAGGATGCAAAGCACGGCCCCGGGCGC
GTCGCGAAGCGGGTGGTGGCAGGGCACCCGAAGCCGTTGGCGCGAGGCCG
CGGGGTCCCCGACTCCCTTCCCAGGCGAGGGCTCCAGGCCCGGCAGCTCC
CTGCGGACGCGGGCCTGCCCATGCCAGTGGACCCGCTGGCAGCAAACTGG
ACGCTGGTGGAGGTGCTGGAGACGCTGGTCTTGAAGAAGGCGGGGCCCGG
GCCCGAGGCCTTCGAGCTCCTGGTCAACGCCCGCGTCAGCAACATGGGCC
AGAAGCCCCTCTGCGACCTCTCCCTCTTCGTCCGGGACCTGCACCTGGCG
GGGGCGTACTGGAGCCTGCTCCCGGTGGAGGGGACGCCGGACGTGGCGCG
CCTGCCCTCGAAAGAGTCCTCGCTCATGCCGGGCCAGAGCCACTACTTTG
GGCTGGTGGTGGAGGAGACCGCGAAGAAGGAGGGGGAGCAGGAGGGGCAG
CCCAACTTGGTGGTGCTCACGGCCAAGGAGTGCGTGGGCATGGGCCCGGC
GGCGGGGGCGGGGAAGGCCTGAGGCGTTGGGGGGACAGGGGCAGGAAGGA
GTATAAAGAGAGGGTGGGCGGGATGTGTATGTCAGGAGGGGGTAGAGTAG
AGGAGGCAGGGTGAGACTGCGGCAAGGAGGGGCGAAGGGAGGAGGGCCGG
AGGGGCGGGCCACTACAGAGGAGGGGGGTTGGGGCACTGCCGCGGCCTCC
ACGCCTGCCGAGGAGACCGAGCTCTCTGGATTGTCGGGGGAGGGGGGCGC
GCCTGACGGCGTGCTGGGGGAGGGCGTGTGAATTAGAAAGGATGATGCCA
GGATGATCGGCTTGGGGTCGAGGGGTCTGGGAGGGCGGGAAGGCGGGGAC
AAGGCGGGATAAAGAGCCGTGTGATGCTCCCCTCGCACCCAGGGTATGGG
TTACGAATGTACGGAGGACCTGAGGCAAGCACAACGATCGACGGGTGGGA
GAAGCGGGGCTAGGAGCCATTGCTCGATTTTCTTCGCATTTTTTCTTTCG
CGTTCTGCACATGCTCGATCCCTCGCGCGTCCACGACAGACCTCTTCCCA
GCCTACCTCTTTTTCTTCCCCC back to topprotein sequence of rna7385 >rna7385-protein ID=rna7385-protein|Name=rna7385|organism=Nannochloropsis gaditana|type=polypeptide|length=554bp
MEAEEIAVTSTSRKEGRMLFRLLRQLRSISIRNLGISTDDVNSAPPPSTY
IQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVL
DLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDR
ETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLA
HLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPY
LAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAP
SPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEM
GFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQ
GAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPL
RYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLL
HARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQS
FAFL back to topmRNA from alignment at CM002471.1:461778..463807+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7385 ID=rna7385|Name=rna7385|organism=Nannochloropsis gaditana|type=mRNA|length=2030bp|location=Sequence derived from alignment at CM002471.1:461778..463807+ (Nannochloropsis gaditana)
CGGCCTTACATCGAGCTTGTACATGCACAGGGGAGGATCACGCATTCAGG
GGTGGACTGCGGCTTTGTCCACCTCGGGCGCCTCGCCatggaagcagagg
aaatAGCAGTCACATCTACttcgcggaaggaggggagaatgCTTTTTGTA
AGAAATCAGGAAATCACCGTGGCATAAATTAGGAAACTATCGTGGCAGAA
TCATGTCCGAAATTATTGCATGGCGACTAAAGTTGCATGGCCATTTCTTG
GTGCTAGTGTAGCTTGAGTGGGTTTTTGTTGCGAATCGTATGCCACCTTC
TCATCCGTCAAGCTCTCCTGTTGCTGATTTGCATCTCTCCACTTTTCAAC
CCTACTCAAAGCGATTGCTTCGACAGTTGCGCTCAATTTCAATCCGAAAC
CTAGGTATCAGCACTGATGATGTGAACagcgcccctccaccctctaCCTA
CATCCAAGTTCtagctcctccgcccccctcgtcctcccctccttcttcct
cccctccactgaCCCCCCTCGTCGCCCCTCAAGCCGACTTCCGCGTTCAC
TACACGAGCCAAGTGGCACCCAGCACGTATAATCCAACCTGGCTGGTGCT
GGACTTGGAACCATTCGCAGAGCACactgacgaggaggggaaaaacaagg
aaggggggtgtCGGCCGCCCTCGGAGGCGCACGGAGAGGAGTTCTGCGTT
CGCGTCTTTCGCGCTCCGGGCCCCTACGATGAAGGCGTCAATGTCGACAG
AGAGACCTTGTCCGATCATTTTCGGGAGCGTCAGAACGGAAAgtggaggg
gatggtggcCGTGCCAACCGGCAACGGGGGAAAGCCCTCTGGCCGAATTt
gtcttccgcctccccgatGTGTGgtgccttccccccagcATGAAGCTCGC
ACACCTGCATTTACCGTGCCGACATCCCTCCTGCTTGCTCGccacggggg
aggacggcaaagGCCTTCTGGTGTCCGCCTCTGTCGGGGTGGGCCTGGga
ctggaagggggaggcacAGACCCGGCGCCCTACCTGCTAGACGAGCCCTA
CTTGGCAGGGCTCGAGGAGCTCCAGCATCGACCATCCTTCTCACCaggct
tcccctccgcgcGCGCGTCCTCGGTGGCGGGTCATGGTCTCCCCGAGGGC
CTGGCTTCGCGGGACTTGGCCCCAGAGGGTCGCGGTCCCAAAgacgcgcc
ctcccctgtgCCTGTCTGGCTGCGAACAGAAgcgaggaggctggaagCTT
TGTTGGaagccgaggaaggggcgctggccgtggaagaggaggcgctggtg
gaggaagaggaggatctgcGGGGCCTCGTGGctatggtggaggccgagaT
GGGCTTCGGGGAGAGGCTGGCGGGGGCGACGCGGAGgctgctgggggagg
agagggcgcgggaggagtCGTTGCTCCGCAAGGAGTTTTTGGTGGCGAGA
AGGCAGCAGAGGCTGGTGGCAGGGCTCCGGCGCATTTATCCGATCGagca
gggggcgggggagcaagaATATCGGATCCGCGGACTGGAACTGCCGGCGG
ACGTGGTGCACGCGCCCAAAGACGACGAGGTTGttgcctccgccctcggg
TACGTGTGCCACGTGCTGGTGATGCTCTCCAAATACCTAGAAGTGCCTTT
ACGATACGCGCTCGAGCCCCGGGCATCCCGCTCTCTCATTCGCGATGCGA
CCGTCGGATATCCTgttttccccctctaccGACGGGGTGTTGAACGAGAG
CGTTTTGAATGGGCAATATACCTGCTCAGGAAAGACATCCAGGGGCTGTT
GCACGCGCGGGGTGTGCCCACGGCCTTGCTGCCCGGAAGAAAAGGCGTGG
GGGGTACAGGGGGTCAGTGGGGTTTTCTGCCAGATCCGCCGCAGGGGGCG
CACATACTGCAAAATTTGGAGGCTTTGTTCACCCACGAATTGTCACAGTC
ATTCGCTTTTTTGTGAGGGTGTTTTGTAAGTAATGTTTATGAAAATCACA
AGCTtggaaaaaggcgagagGTAGCTTTCA back to topCoding sequence (CDS) from alignment at CM002471.1:461778..463807+ >rna7385 ID=rna7385|Name=rna7385|organism=Nannochloropsis gaditana|type=CDS|length=3330bp|location=Sequence derived from alignment at CM002471.1:461778..463807+ (Nannochloropsis gaditana)
atggaagcagaggaaatAGCAGTCACATCTACttcgcggaaggaggggag
aatgCTTTTTCGATTGCTTCGACAGTTGCGCTCAATTTCAATCCGAAACC
TAGGTATCAGCACTGATGATGTGAACagcgcccctccaccctctaCCTAC
ATCCAAGTTCtagctcctccgcccccctcgtcctcccctccttcttcctc
ccctccactgaCCCCCCTCGTCGCCCCTCAAGCCGACTTCCGCGTTCACT
ACACGAGCCAAGTGGCACCCAGCACGTATAATCCAACCTGGCTGGTGCTG
GACTTGGAACCATTCGCAGAGCACactgacgaggaggggaaaaacaagga
aggggggtgtCGGCCGCCCTCGGAGGCGCACGGAGAGGAGTTCTGCGTTC
GCGTCTTTCGCGCTCCGGGCCCCTACGATGAAGGCGTCAATGTCGACAGA
GAGACCTTGTCCGATCATTTTCGGGAGCGTCAGAACGGAAAgtggagggg
atggtggcCGTGCCAACCGGCAACGGGGGAAAGCCCTCTGGCCGAATTtg
tcttccgcctccccgatGTGTGgtgccttccccccagcATGAAGCTCGCA
CACCTGCATTTACCGTGCCGACATCCCTCCTGCTTGCTCGccacggggga
ggacggcaaagGCCTTCTGGTGTCCGCCTCTGTCGGGGTGGGCCTGGgac
tggaagggggaggcacAGACCCGGCGCCCTACCTGCTAGACGAGCCCTAC
TTGGCAGGGCTCGAGGAGCTCCAGCATCGACCATCCTTCTCACCaggctt
cccctccgcgcGCGCGTCCTCGGTGGCGGGTCATGGTCTCCCCGAGGGCC
TGGCTTCGCGGGACTTGGCCCCAGAGGGTCGCGGTCCCAAAgacgcgccc
tcccctgtgCCTGTCTGGCTGCGAACAGAAgcgaggaggctggaagCTTT
GTTGGaagccgaggaaggggcgctggccgtggaagaggaggcgctggtgg
aggaagaggaggatctgcGGGGCCTCGTGGctatggtggaggccgagaTG
GGCTTCGGGGAGAGGCTGGCGGGGGCGACGCGGAGgctgctgggggagga
gagggcgcgggaggagtCGTTGCTCCGCAAGGAGTTTTTGGTGGCGAGAA
GGCAGCAGAGGCTGGTGGCAGGGCTCCGGCGCATTTATCCGATCGagcag
ggggcgggggagcaagaATATCGGATCCGCGGACTGGAACTGCCGGCGGA
CGTGGTGCACGCGCCCAAAGACGACGAGGTTGttgcctccgccctcgggT
ACGTGTGCCACGTGCTGGTGATGCTCTCCAAATACCTAGAAGTGCCTTTA
CGATACGCGCTCGAGCCCCGGGCATCCCGCTCTCTCATTCGCGATGCGAC
CGTCGGATATCCTgttttccccctctaccGACGGGGTGTTGAACGAGAGC
GTTTTGAATGGGCAATATACCTGCTCAGGAAAGACATCCAGGGGCTGTTG
CACGCGCGGGGTGTGCCCACGGCCTTGCTGCCCGGAAGAAAAGGCGTGGG
GGGTACAGGGGGTCAGTGGGGTTTTCTGCCAGATCCGCCGCAGGGGGCGC
ACATACTGCAAAATTTGGAGGCTTTGTTCACCCACGAATTGTCACAGTCA
TTCGCTTTTTTGTGAatggaagcagaggaaatAGCAGTCACATCTACttc
gcggaaggaggggagaatgCTTTTTCGATTGCTTCGACAGTTGCGCTCAA
TTTCAATCCGAAACCTAGGTATCAGCACTGATGATGTGAACagcgcccct
ccaccctctaCCTACATCCAAGTTCtagctcctccgcccccctcgtcctc
ccctccttcttcctcccctccactgaCCCCCCTCGTCGCCCCTCAAGCCG
ACTTCCGCGTTCACTACACGAGCCAAGTGGCACCCAGCACGTATAATCCA
ACCTGGCTGGTGCTGGACTTGGAACCATTCGCAGAGCACactgacgagga
ggggaaaaacaaggaaggggggtgtCGGCCGCCCTCGGAGGCGCACGGAG
AGGAGTTCTGCGTTCGCGTCTTTCGCGCTCCGGGCCCCTACGATGAAGGC
GTCAATGTCGACAGAGAGACCTTGTCCGATCATTTTCGGGAGCGTCAGAA
CGGAAAgtggaggggatggtggcCGTGCCAACCGGCAACGGGGGAAAGCC
CTCTGGCCGAATTtgtcttccgcctccccgatGTGTGgtgccttcccccc
agcATGAAGCTCGCACACCTGCATTTACCGTGCCGACATCCCTCCTGCTT
GCTCGccacgggggaggacggcaaagGCCTTCTGGTGTCCGCCTCTGTCG
GGGTGGGCCTGGgactggaagggggaggcacAGACCCGGCGCCCTACCTG
CTAGACGAGCCCTACTTGGCAGGGCTCGAGGAGCTCCAGCATCGACCATC
CTTCTCACCaggcttcccctccgcgcGCGCGTCCTCGGTGGCGGGTCATG
GTCTCCCCGAGGGCCTGGCTTCGCGGGACTTGGCCCCAGAGGGTCGCGGT
CCCAAAgacgcgccctcccctgtgCCTGTCTGGCTGCGAACAGAAgcgag
gaggctggaagCTTTGTTGGaagccgaggaaggggcgctggccgtggaag
aggaggcgctggtggaggaagaggaggatctgcGGGGCCTCGTGGctatg
gtggaggccgagaTGGGCTTCGGGGAGAGGCTGGCGGGGGCGACGCGGAG
gctgctgggggaggagagggcgcgggaggagtCGTTGCTCCGCAAGGAGT
TTTTGGTGGCGAGAAGGCAGCAGAGGCTGGTGGCAGGGCTCCGGCGCATT
TATCCGATCGagcagggggcgggggagcaagaATATCGGATCCGCGGACT
GGAACTGCCGGCGGACGTGGTGCACGCGCCCAAAGACGACGAGGTTGttg
cctccgccctcgggTACGTGTGCCACGTGCTGGTGATGCTCTCCAAATAC
CTAGAAGTGCCTTTACGATACGCGCTCGAGCCCCGGGCATCCCGCTCTCT
CATTCGCGATGCGACCGTCGGATATCCTgttttccccctctaccGACGGG
GTGTTGAACGAGAGCGTTTTGAATGGGCAATATACCTGCTCAGGAAAGAC
ATCCAGGGGCTGTTGCACGCGCGGGGTGTGCCCACGGCCTTGCTGCCCGG
AAGAAAAGGCGTGGGGGGTACAGGGGGTCAGTGGGGTTTTCTGCCAGATC
CGCCGCAGGGGGCGCACATACTGCAAAATTTGGAGGCTTTGTTCACCCAC
GAATTGTCACAGTCATTCGCTTTTTTGTGA back to top
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