EWM23311.1, cds7368 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|585104318|gb|EWM23311.1| (uv radiation resistance-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 1106.66 bits (2861), Expect = 0.000e+0 Identity = 554/554 (100.00%), Postives = 554/554 (100.00%), Query Frame = 0 Query: 1 MEAEEIAVTSTSRKEGRMLFRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 554 MEAEEIAVTSTSRKEGRMLFRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL Sbjct: 1 MEAEEIAVTSTSRKEGRMLFRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 554
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|585104319|gb|EWM23312.1| (uv radiation resistance-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 1067.76 bits (2760), Expect = 0.000e+0 Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0 Query: 21 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 554 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL Sbjct: 25 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 558
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|298706671|emb|CBJ29600.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 117.857 bits (294), Expect = 9.930e-28 Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 0 Query: 395 IYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPV-FPLYRRGVERERFEWAIYLLRKDIQGLLHARGVP 506 IYPI+ +E+ IRGLELPAD+ DDE ++SALGY H++ ML+KYL++ LRY + ASRS +RD G V +PL+RRGVE+ERF+ +YLL +D++ +L ARGVP Sbjct: 5 IYPIKYQGNLKEFTIRGLELPADLYSI--DDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQILTARGVP 115
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|510999964|gb|EPB81539.1| (hypothetical protein HMPREF1544_11750 [Mucor circinelloides f. circinelloides 1006PhL] >gi|511000114|gb|EPB81676.1| hypothetical protein HMPREF1544_11593 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 120.168 bits (300), Expect = 5.432e-25 Identity = 59/129 (45.74%), Postives = 91/129 (70.54%), Query Frame = 0 Query: 381 VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 + RR++ L+A L IYPIEQ + Q++RIRG+ LP + V+ ++DE++A+ALG+ H++ ML+ YLE+PLRY P +SRS I+D G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 381 LNRRKKELIADLFSIYPIEQSYDDSQQFRIRGIYLP-NSVYDGQNDEMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTIKDLVSLISGSRDFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 508
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|1183330986|gb|ORX60724.1| (hypothetical protein DM01DRAFT_1332846 [Hesseltinella vesiculosa]) HSP 1 Score: 119.783 bits (299), Expect = 6.694e-25 Identity = 77/221 (34.84%), Postives = 126/221 (57.01%), Query Frame = 0 Query: 307 LRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMG-FGERLA------GATRRLLGEERA---REESLLRK--------EFLVARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATV---GYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 L T A R++ + E + ++E L ++ +D + + + ++ +RL ATR+ +E+ E LL K + + RQ+ L+A L IYPIEQ + Q++RIRGL LP + V+A D+EVVA+ALG+ H++ ML+ YL +PLRY ++P SR+ I D G FPLY +GV++ RFE+ ++LL K+I+ +++A G+ Sbjct: 289 LDTNAVRMQLMRERSQKETRLKE--LEKQAQDKKAHLDLAHDKVHQLRKRLQSRRCEINATRQRFSQEQKDLDNNERLLSKNTRMYHDTQVDLNLRQKELIADLFSIYPIEQSFDDFQQFRIRGLYLP-NSVYAGCDEEVVATALGFTAHLVSMLAYYLAIPLRYPIDPMGSRASIHDPVSMIHGSRTFPLYSKGVDKYRFEFGVFLLNKNIEQMMNAYGL 506
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|758363817|emb|CEP13861.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 117.857 bits (294), Expect = 2.611e-24 Identity = 58/129 (44.96%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 381 VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 + RR++ L+A L IYPIEQ + Q++RIRG+ LP + V+ ++D+++A+ALG+ H++ ML+ YLE+PLRY P +SRS I D G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 376 LNRRRKELIADLFSIYPIEQSYDDSQQFRIRGIYLP-NSVYDGQNDDMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTITDLVSLISGSREFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 503
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|1026269015|gb|OAD02113.1| (hypothetical protein MUCCIDRAFT_164051 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 117.087 bits (292), Expect = 5.682e-24 Identity = 63/149 (42.28%), Postives = 98/149 (65.77%), Query Frame = 0 Query: 363 LLGEERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 L ER E+++ ++ + + RR++ L+A L IYPIEQ +RIRG+ LP + V+ ++DE++A+ALG+ H++ ML+ YLE+PLRY P +SRS IRD G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 365 LQENERVLEKNIHMRQTMFHTLNRRKKELIADLFSIYPIEQ------FRIRGIYLP-NSVYDGQNDEMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTIRDLVSLISGSRDFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 506
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|671691055|emb|CDS05793.1| (hypothetical protein LRAMOSA08321 [Lichtheimia ramosa]) HSP 1 Score: 115.931 bits (289), Expect = 1.197e-23 Identity = 78/202 (38.61%), Postives = 119/202 (58.91%), Query Frame = 0 Query: 318 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 LE EG + VE+ A E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G +FPLY +GV+R RFE+ ++LL KDI+ L++A G+ Sbjct: 275 LEGIEGQI-VEKNA--EIRRDRRRIAELRETLERRRSKLDEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTIFPLYAKGVDRYRFEFGVFLLNKDIEQLMNAYGL 472
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|661180301|emb|CDH57106.1| (uv radiation resistance protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 113.62 bits (283), Expect = 1.012e-22 Identity = 74/202 (36.63%), Postives = 115/202 (56.93%), Query Frame = 0 Query: 318 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 LE EG + + E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 374 LEGIEGQIVKKN---TEIRRDRRRIAELRETLERRKSKLNEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTTFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 571
BLAST of EWM23311.1 vs. NCBI_GenBank
Match: gi|661180300|emb|CDH57105.1| (uv radiation resistance protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 113.235 bits (282), Expect = 1.079e-22 Identity = 74/202 (36.63%), Postives = 115/202 (56.93%), Query Frame = 0 Query: 318 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 505 LE EG + + E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 375 LEGIEGQIVKKN---TEIRRDRRRIAELRETLERRKSKLNEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTTFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 572 The following BLAST results are available for this feature:
BLAST of EWM23311.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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