rna7382, rna7382 (mRNA) Nannochloropsis gaditana

Overview
Namerna7382
Unique Namerna7382
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length459
Alignment locationCM002471.1:456206..457520 -

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Properties
Property NameValue
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100053g35.5078.mrna
Orig protein idgnl|cribi|Naga_100053g35.5078
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:456206..457520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100053g35gene7142Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7382rna7382-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23338.1cds7365Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7382 ID=rna7382|Name=rna7382|organism=Nannochloropsis gaditana|type=mRNA|length=459bp
ATGGGACTTATTACGATGCCTGTAAACATGCTGTTGATAATCTGTTGGTG
TCTCGCTCTATTATTCTCCACAAGAACCGCTGAAGCAAGTAGGCGACCCG
TATGTACTCTGACACCTTTCATATGCCCTGCTCCCGGTCTCTACCGGCAA
CACAATGGTCGTCGGAGAACACTCAATCTGTATTGGGGAGTTTTCGGCGG
TAGTTCCTCCAAAAAGATTAATCCTGGGAAAGGCAGCGGAGAGGATCCTG
CGAAAGTGAGGGCTCGCATTGCCTCTTGCAGAGTCTGTAATAAGAAAGGA
GCAGTGAATTGTCCGGTCTGTGCCGGAACCGGTATCGACCAAAAAAATGG
CGCCATCTTTGAGCGCTACAAATGCTTGAAATGCCAGGGGTTTGGGTATG
TGAGTTGTGAGGCCTGCAATCCCGGTGGCTTGACGCCCGAACAGCGAGGA
GAAAGGTGA
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protein sequence of rna7382

>rna7382-protein ID=rna7382-protein|Name=rna7382|organism=Nannochloropsis gaditana|type=polypeptide|length=197bp
MKTLFSTSLLSLLAVLMCAPVASFIPSSPSASSGVATVRRSFSASPLRVV
ITPDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVEL
RRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVA
DFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDARISREEDE
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mRNA from alignment at CM002471.1:456206..457520-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7382 ID=rna7382|Name=rna7382|organism=Nannochloropsis gaditana|type=mRNA|length=1315bp|location=Sequence derived from alignment at CM002471.1:456206..457520- (Nannochloropsis gaditana)
CCAAGGCGTCTCCTCGACTCCTGCCTACTCACTCCCAACATTCCATGATT
CTGACCATACTTATAGAGGACAGAGCTAGCAAACGGAGCAAGACCAGTCA
AACACGTGGACGCAGATAGGATGAAAACGCTGTTTTCTACTTCGCTGTTG
TCGCTTCTGGCGGTATTAATGTGCGCACCTGTGGCATCGTTTATTCCCTC
TTCTCCCTCTGCCTCGTCAGGAGTCGCAACAGTGCGCAGATCCTTTTCGG
CATCACCTCTGAGGGTTGTCATCACACCAGATGGCTCACCCTCCATGCAG
GAATACCGGAAGAAAGTGCTGCAGGATCTGGTGGAGCGTAAAAATATCGG
AGAGCTGGATGGCTACCAGCTTTTCGACATGATCGTTGCGAAGTGGGGAG
TACCTTATGGGGTGGAGCTGAGACGAATGGACTTCGCAGGAAAGAAATTG
CTGTACATTAATGTAATGTGGAAGTACCTCGGGCAGCAGTCTTTTCCACT
CAATGAGCGCCAGTATTTGGAGCATTTGGTGAGTGGGATCGGGGGGAAAG
AGGGTGTCCTCGTAGTATCAGGATCTTTTTGGGGTCTGTACTTAAGCAGT
TGAATGCGTGATCGTGCTAATTTTATACCGCGAGGGTTCTCATGGCAGTC
TTCTTCCCGCGTGAATCGTGTGTAACTGTCTTCCCTCTGGGCACGGAACA
GGAGTACATTTCGCGAAAGCTTGTGCAGTGGGGCAAGGTCGCCGACTTCA
AGAAGGACCTGGCCGAATGCAGGAAAAAGCCCAACGCCTACTTTGGATAT
GCCGTGTCCTTCAATGTCCCGGTCTCGGAGGCGGAGATTGATCAGTTCGT
GGAGGACGCCCGCATTTCAAGGGTAGGTCGAGGGCGTAAGGGGCTCGATA
TTGGCGCGGGGGGGATGCAATGTGTACCATGAGCGCTGTGTGGTGTCTAG
CTATACTTGTGCCTGACTCCACTCATTGCTCGCATGAAAGAGACTAATTT
CCCTGTTGTGGCGGCTCCCACGTTCATCCCCCTGTCAGGAGGAGGACGAA
TAACCTACCCGCCAGAGAATCTTTGGTCGTCGCCGTACTTGCTTTCGAAA
AGGTGCCAAGAGTCTGGGAACTAAGCGAGATGGGCTCGGTTGACATGACT
CAAGAAGGGATACGACCAGGAGGATGAAGACAGCATAGAGCAGCGGTCTT
TTTGCGTCATGCGATTACAGGATCATGTCCGCACAAGGAGAGAAATACTT
TGTAAAATTACACGAGCGAAAGCAGTCCTTCGAGATGTTTAATAGGAATT
ATTTATGAAGTGTTG
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Coding sequence (CDS) from alignment at CM002471.1:456206..457520-

>rna7382 ID=rna7382|Name=rna7382|organism=Nannochloropsis gaditana|type=CDS|length=1782bp|location=Sequence derived from alignment at CM002471.1:456206..457520- (Nannochloropsis gaditana)
GAGGAGGACGAATAAGAGTACATTTCGCGAAAGCTTGTGCAGTGGGGCAA
GGTCGCCGACTTCAAGAAGGACCTGGCCGAATGCAGGAAAAAGCCCAACG
CCTACTTTGGATATGCCGTGTCCTTCAATGTCCCGGTCTCGGAGGCGGAG
ATTGATCAGTTCGTGGAGGACGCCCGCATTTCAAGGATGAAAACGCTGTT
TTCTACTTCGCTGTTGTCGCTTCTGGCGGTATTAATGTGCGCACCTGTGG
CATCGTTTATTCCCTCTTCTCCCTCTGCCTCGTCAGGAGTCGCAACAGTG
CGCAGATCCTTTTCGGCATCACCTCTGAGGGTTGTCATCACACCAGATGG
CTCACCCTCCATGCAGGAATACCGGAAGAAAGTGCTGCAGGATCTGGTGG
AGCGTAAAAATATCGGAGAGCTGGATGGCTACCAGCTTTTCGACATGATC
GTTGCGAAGTGGGGAGTACCTTATGGGGTGGAGCTGAGACGAATGGACTT
CGCAGGAAAGAAATTGCTGTACATTAATGTAATGTGGAAGTACCTCGGGC
AGCAGTCTTTTCCACTCAATGAGCGCCAGTATTTGGAGCATTTGGAGGAG
GACGAATAAGAGTACATTTCGCGAAAGCTTGTGCAGTGGGGCAAGGTCGC
CGACTTCAAGAAGGACCTGGCCGAATGCAGGAAAAAGCCCAACGCCTACT
TTGGATATGCCGTGTCCTTCAATGTCCCGGTCTCGGAGGCGGAGATTGAT
CAGTTCGTGGAGGACGCCCGCATTTCAAGGATGAAAACGCTGTTTTCTAC
TTCGCTGTTGTCGCTTCTGGCGGTATTAATGTGCGCACCTGTGGCATCGT
TTATTCCCTCTTCTCCCTCTGCCTCGTCAGGAGTCGCAACAGTGCGCAGA
TCCTTTTCGGCATCACCTCTGAGGGTTGTCATCACACCAGATGGCTCACC
CTCCATGCAGGAATACCGGAAGAAAGTGCTGCAGGATCTGGTGGAGCGTA
AAAATATCGGAGAGCTGGATGGCTACCAGCTTTTCGACATGATCGTTGCG
AAGTGGGGAGTACCTTATGGGGTGGAGCTGAGACGAATGGACTTCGCAGG
AAAGAAATTGCTGTACATTAATGTAATGTGGAAGTACCTCGGGCAGCAGT
CTTTTCCACTCAATGAGCGCCAGTATTTGGAGCATTTGGAGGAGGACGAA
TAAGAGTACATTTCGCGAAAGCTTGTGCAGTGGGGCAAGGTCGCCGACTT
CAAGAAGGACCTGGCCGAATGCAGGAAAAAGCCCAACGCCTACTTTGGAT
ATGCCGTGTCCTTCAATGTCCCGGTCTCGGAGGCGGAGATTGATCAGTTC
GTGGAGGACGCCCGCATTTCAAGGATGAAAACGCTGTTTTCTACTTCGCT
GTTGTCGCTTCTGGCGGTATTAATGTGCGCACCTGTGGCATCGTTTATTC
CCTCTTCTCCCTCTGCCTCGTCAGGAGTCGCAACAGTGCGCAGATCCTTT
TCGGCATCACCTCTGAGGGTTGTCATCACACCAGATGGCTCACCCTCCAT
GCAGGAATACCGGAAGAAAGTGCTGCAGGATCTGGTGGAGCGTAAAAATA
TCGGAGAGCTGGATGGCTACCAGCTTTTCGACATGATCGTTGCGAAGTGG
GGAGTACCTTATGGGGTGGAGCTGAGACGAATGGACTTCGCAGGAAAGAA
ATTGCTGTACATTAATGTAATGTGGAAGTACCTCGGGCAGCAGTCTTTTC
CACTCAATGAGCGCCAGTATTTGGAGCATTTG
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Synonyms
Publications