EWM23338.1, cds7365 (CDS) Nannochloropsis gaditana

Overview
NameEWM23338.1
Unique Namecds7365
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:456993..457400 -
Alignment locationCM002471.1:456649..456819 -
Alignment locationCM002471.1:456468..456482 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23338.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100053g35.5078.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:456993..457400 -
CM002471.1supercontigCM002471.1:456649..456819 -
CM002471.1supercontigCM002471.1:456468..456482 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR021420DUF3067
Homology
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|585104345|gb|EWM23338.1| (uncharacterized protein Naga_100053g35 [Nannochloropsis gaditana])

HSP 1 Score: 405.601 bits (1041), Expect = 2.732e-143
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query:    1 MKTLFSTSLLSLLAVLMCAPVASFIPSSPSASSGVATVRRSFSASPLRVVITPDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDARISREEDE 197
            MKTLFSTSLLSLLAVLMCAPVASFIPSSPSASSGVATVRRSFSASPLRVVITPDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDARISREEDE
Sbjct:    1 MKTLFSTSLLSLLAVLMCAPVASFIPSSPSASSGVATVRRSFSASPLRVVITPDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDARISREEDE 197          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|551644241|ref|XP_005824912.1| (hypothetical protein GUITHDRAFT_97095 [Guillardia theta CCMP2712] >gi|428168994|gb|EKX37932.1| hypothetical protein GUITHDRAFT_97095 [Guillardia theta CCMP2712])

HSP 1 Score: 126.331 bits (316), Expect = 5.653e-33
Identity = 56/117 (47.86%), Postives = 83/117 (70.94%), Query Frame = 0
Query:   58 SMQEYRKKVLQDLVERKNIG-ELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSF 173
            S++ +R  + Q    +K+   E DGY   D+IV KWGVPY V+++R  F GK +++ NVMWK+ GQQSFPL E +YLEHL++++   V+W +V   K+++A+CRK+PN YFGYAV+ 
Sbjct:   71 SIEAFRSLMQQSWKGKKSESKEFDGYAFRDLIVEKWGVPYDVQIKREYFLGKPMIFFNVMWKWCGQQSFPLTETEYLEHLQFLAELCVKWDRVDLLKEEIAKCRKRPNGYFGYAVAL 187          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|299117060|emb|CBN73831.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 112.849 bits (281), Expect = 1.493e-27
Identity = 47/112 (41.96%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   78 ELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDA 189
            E  GY ++D+IV K+ VPY V++ +  + GK +L  N+MWK+LGQ SFPL+E++YLEHL+ ++  L++W +V  FK+ LA+ +K+P +YFGYAV+  + +    +  + +D+
Sbjct:  109 EFTGYDMYDLIVDKFDVPYDVQINKTVWMGKPVLCFNIMWKHLGQSSFPLSEQEYLEHLQALAELLMEWDRVDQFKRSLADTKKRPQSYFGYAVALPLDLDPDTMVDYFDDS 220          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|873225314|emb|CEM24042.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 92.4337 bits (228), Expect = 1.749e-18
Identity = 41/106 (38.68%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   78 ELDGYQLFDMIVAKWGVPYGVELRRMDF-AGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEI 182
            + +G QL D+IV K+GVPY +   R+D+  G++ ++  + W+YLG+  F + + QYL+ +E ++  LV+W +V  F+  +A+ RK P+AYFG AV   + V E E+
Sbjct:  328 QFNGEQLADLIVQKYGVPYVIHPNRLDWMGGRRKMFYQITWRYLGEPGFEMTKDQYLDLMETLAYLLVRWNRVDHFRNQVAKTRKVPDAYFGRAVPIALDVPEEEV 433          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|545707964|ref|XP_005706295.1| (hypothetical protein Gasu_27770 [Galdieria sulphuraria] >gi|452822759|gb|EME29775.1| hypothetical protein Gasu_27770 [Galdieria sulphuraria])

HSP 1 Score: 84.7297 bits (208), Expect = 5.726e-17
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   41 SFSASPLRVVITPDGSPSMQEYRKKVLQDLVERKNI--GELDGYQLFDMIVAKWGVPYGVELRRMD-FAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVE 187
            S S   L ++       +++ +R+ + + L E K+     LDG QL ++++ ++G+ Y + L+    F+GK LL  N+MW Y+ QQSFPL E +YL HLE I++ L  WG V  F   L   ++KP      AVS  + VS+ EI +F+ 
Sbjct:   54 SGSYPKLSLLACAKNRDNVERFRENLERSLGEAKHSYRKTLDGVQLRELLLQRYGLSYDIRLKVTPWFSGKYLLTANIMWLYVEQQSFPLTEHEYLCHLEAIAQYLNNWGVVNQFIDFLQSTKQKPRV--AKAVSVPLDVSQEEIVEFMN 201          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|1026766877|gb|OAE27285.1| (hypothetical protein AXG93_59s1300 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 85.1149 bits (209), Expect = 6.146e-17
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 0
Query:   60 QEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEA 180
            +++RK++ + L    +    +G  L  +I  K+G  Y V+L + +F G++LL +NVMWKY  Q+SFPL E +YL HL+YI++ L  WG V+  +  L + R++P    G AVS  + V E 
Sbjct:   92 EQFRKQMERMLSSHDD--RFEGKDLATLIRQKYGRSYDVQLVKKEFLGRQLLAMNVMWKYREQRSFPLTEEEYLLHLDYIAQNLRGWGAVSYVRDSLEKTRERPR--IGKAVSIFIEVDET 208          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|488820314|ref|WP_002732720.1| (hypothetical protein [Microcystis aeruginosa] >gi|159028173|emb|CAO89780.1| unnamed protein product [Microcystis aeruginosa PCC 7806] >gi|389676244|emb|CCH94686.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432] >gi|389769368|emb|CCI05787.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941] >gi|389824404|emb|CCI26639.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808] >gi|440176775|gb|ELP56048.1| hypothetical protein O53_647 [Microcystis aeruginosa TAIHU98] >gi|443331646|gb|ELS46292.1| hypothetical protein C789_3893 [Microcystis aeruginosa DIANCHI905] >gi|513475707|gb|EPF22951.1| hypothetical protein MAESPC_01333 [Microcystis aeruginosa SPC777] >gi|1053311342|gb|OCY14127.1| hypothetical protein BEV12_20710 [Microcystis aeruginosa CACIAM 03] >gi|1064238586|gb|ODV35885.1| hypothetical protein BFG60_4635 [Microcystis aeruginosa NIES-98] >gi|1181758921|gb|ARI82275.1| hypothetical protein BH695_2996 [Microcystis aeruginosa PCC 7806SL])

HSP 1 Score: 80.8777 bits (198), Expect = 1.475e-16
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   79 LDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVED 188
            + G  L  +++ KWG  Y ++LRR+    K  +++ VMWKYL Q SFPL+E +YLEHL  I+  L +WG V+ F+  + E R++P    G AVS  + + E   +  + D
Sbjct:    1 MTGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNAIANYLHEWGGVSQFQAFIRETRERPR--LGKAVSLPLDLGERASEWLISD 104          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|817697938|ref|WP_046660583.1| (DUF3067 domain-containing protein [Microcystis aeruginosa] >gi|815963399|gb|AKE62544.1| hypothetical protein MYAER_0180 [Microcystis aeruginosa NIES-2549] >gi|1052158465|gb|AOC50933.1| hypothetical protein amyaer_0180 [Microcystis aeruginosa NIES-2481])

HSP 1 Score: 80.4925 bits (197), Expect = 2.628e-16
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   79 LDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVED 188
            + G  L  +++ KWG  Y ++LRR+    K  +++ VMWKYL Q SFPL+E +YLEHL  I+  L +WG V+ F+  + E R++P    G AVS  + + E   +  + D
Sbjct:    1 MTGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNAIANYLHEWGGVSQFQAFIRETRERPR--LGKAVSLPLDLGERASEWLLSD 104          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|488844468|ref|WP_002756874.1| (MULTISPECIES: DUF3067 domain-containing protein [Microcystis] >gi|389718454|emb|CCH97586.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717] >gi|389801575|emb|CCI19275.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807] >gi|389838546|emb|CCI30671.1| conserved hypothetical protein [Microcystis sp. T1-4] >gi|914401541|gb|AKV69210.1| hypothetical protein VL20_4270 [Microcystis panniformis FACHB-1757] >gi|1002147875|gb|KXS89306.1| hypothetical protein OA58_22415 [Microcystis aeruginosa NIES-88] >gi|1158731522|gb|OPF17257.1| hypothetical protein B1L04_14545 [Microcystis aeruginosa KW])

HSP 1 Score: 79.7221 bits (195), Expect = 4.936e-16
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   79 LDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVED 188
            + G  L  +++ KWG  Y ++LRR+    K  +++ VMWKYL Q SFPL+E +YLEHL  I+  L +WG  + F+  + E R++P    G AVS  + + E   +  + D
Sbjct:    1 MTGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNAIANYLHEWGGFSQFQAFIRETRERPR--LGKAVSLALDLGERASEWLISD 104          
BLAST of EWM23338.1 vs. NCBI_GenBank
Match: gi|490265819|ref|WP_004162464.1| (DUF3067 domain-containing protein [Microcystis aeruginosa] >gi|166087823|dbj|BAG02531.1| hypothetical protein MAE_27090 [Microcystis aeruginosa NIES-843] >gi|389834027|emb|CCI20983.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809])

HSP 1 Score: 79.7221 bits (195), Expect = 5.152e-16
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   79 LDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVED 188
            + G  L  +++ KWG  Y ++LRR+    K  +++ VMWKYL Q SFPL+E +YLEHL  I+  L +WG  + F+  + E R++P    G AVS  + + E   +  + D
Sbjct:    1 MTGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNVIANYLHEWGGFSQFQAFIRETRERPR--LGKAVSLALDLGERASEWLISD 104          
The following BLAST results are available for this feature:
BLAST of EWM23338.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104345|gb|EWM23338.1|2.732e-143100.00uncharacterized protein Naga_100053g35 [Nannochlor... [more]
gi|551644241|ref|XP_005824912.1|5.653e-3347.86hypothetical protein GUITHDRAFT_97095 [Guillardia ... [more]
gi|299117060|emb|CBN73831.1|1.493e-2741.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|873225314|emb|CEM24042.1|1.749e-1838.68unnamed protein product [Vitrella brassicaformis C... [more]
gi|545707964|ref|XP_005706295.1|5.726e-1735.33hypothetical protein Gasu_27770 [Galdieria sulphur... [more]
gi|1026766877|gb|OAE27285.1|6.146e-1738.02hypothetical protein AXG93_59s1300 [Marchantia pol... [more]
gi|488820314|ref|WP_002732720.1|1.475e-1638.18hypothetical protein [Microcystis aeruginosa] >gi|... [more]
gi|817697938|ref|WP_046660583.1|2.628e-1638.18DUF3067 domain-containing protein [Microcystis aer... [more]
gi|488844468|ref|WP_002756874.1|4.936e-1637.27MULTISPECIES: DUF3067 domain-containing protein [M... [more]
gi|490265819|ref|WP_004162464.1|5.152e-1637.27DUF3067 domain-containing protein [Microcystis aer... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7382rna7382Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications