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Properties
| Property Name | Value |
|---|
| Product | lipid transfer protein 5 |
| Orig transcript id | gnl|cribi|Naga_100053g17.5066.mrna |
| Orig protein id | gnl|cribi|Naga_100053g17.5066 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:417120..420143 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7362 ID=rna7362|Name=rna7362|organism=Nannochloropsis gaditana|type=mRNA|length=552bp
ATGGGACAAACATATCGAAGTGTAGAACGGAGCCATTTCTGTACTTTAAC
AGTGCAAAGTGTGCAATCATATCATTTGTGTGATATTCCCGCACAGTGCC
TCCTCATTAAGCAGAGAGCTCAAAGCATTTTCTTTCTCATGTTAAATTAC
TTGGAAGTTTCCATCTCCTTTCTCTGTAATCAAGCGAAGTTTCAAATGTT
GACCCACGTGAGTGCGAATTTAGGGGCCAATACAAGCACAAATCTTCATT
TCAGGGACAGCTGCTTGGCTTCTTTCCACTCCTCGATGCACGGTCGGACT
TGCCTTGGATGTGCCTTTGTGATTAGCACAGTTATTCATGCGTCGGGGAA
AACTATGGAAAGTCCTGCGAAAATGGGGACGCGACATCAAATTTTGTCCC
ATCTGCCTAAAACATATAGAAATAGCAGTGTTGCTAGGCAGGAGACCATT
GAACAAGTAGGGGAGGATAAAGATCTCATCCCTACTGAAGTTCGCAAGGA
GATATTTGCGGACATCGATCGAGAGTTCAATCGCGAAGCAGTACCCATTT
AA back to topprotein sequence of rna7362 >rna7362-protein ID=rna7362-protein|Name=rna7362|organism=Nannochloropsis gaditana|type=polypeptide|length=680bp
MAPLTPYSLLKGPSNWRSKSMLLHLAILFLHHSCATADSVSPKSNRVWCG
RSRTNSTWTPIPPVPMGRLAVFFFPERQKGKDNERSIKAIKMRSNNTGDA
KVKPAVAMKSPSLTDVPLWASNHPSSSVSSLPVTDRTPPAHLNRTPPTAD
NAGVRSGWTVPRRWVGLLVDEWQFRVESLDSYRRVVRSRLDDSLTRFQTH
YEAASRDVRRDMDKQLAKASALQEDYMERIAQQQQRLAELTRSELRSRQQ
GFNQSLEQFKRQYDDTWGRFSGTVRKLGPFTKAEVAEQQRRLDETFQQFM
TQYLNSTAEVRGYIDRMMHISSDVFPRLSMEDDQVRGLVQRLREEEVAKL
ARLGKAGVRVERARLEGVVERLREQQERMLRHWSHQRGELDATLKRVMEQ
LLNFNRLYDDLIARKESNLYADSLNDKVLRRVLECLDQGEADGWELVSDA
KGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYN
KFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVV
VNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGG
FAPPAIVNKVTSWGPPTFFREVEAAARTTHKIPAPMRVKDAAPSPESPAT
ASTAPSRTSMPNRVSRPPPLLPSERARRGM back to topmRNA from alignment at CM002471.1:417120..420143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7362 ID=rna7362|Name=rna7362|organism=Nannochloropsis gaditana|type=mRNA|length=3024bp|location=Sequence derived from alignment at CM002471.1:417120..420143+ (Nannochloropsis gaditana)
CGTTCTACACTTCGATATGTTTCTATGTTATCGGCAAGTAGAAGGAAAAT
TCAACGCCTCGTAAAGTGAAAAAAAATGGTATTGGATGCGTCACTGACGT
CCTCCATAGGCCAGTTCTCAGTTCGAAGTTTTCTTGCGGGCTTGACGTCC
CATCACTTCCAAATGAAAATTTCCAGGAATGCTCGAGTGTATCTGCCTCC
TATCATCCAAACTTGAGCTCAGGAGGAATGATTACGCGTACGATGCTGGG
CCGTGATTATGGAGGTCACAATTAAATTCTAGACCCCGATAATTTCACTT
TTAGAACAAGTATTGGAAGCGCTTGCCTAGCCGTTTTCGTACATGTCTTT
TCTTTTAACGACCCGTGGTCGGTCTCCAGGAGCACTTGATCGGAACGCTT
GGACAGCTACTTTGCCAGCAACAGGATTGCTTCTGACACATTATCATACA
GATAGCATGTGTGGAACACAGAAAGACATATGGTTTCCGCGGCTCTCTAG
AAGCTGGATCTTGGCGGGGTTGCCCCACACGAGCGGTGTTCTTCTTGGCG
CTTCTCCGCAACGTCAAGGCCAAGAAATAAATTGATCGATCGCCCTGATC
CTCGCGAGCGCCATGCCAAGTATAATTCGTGTAACTCACTTTTCAGCAGG
TGATAAAGCTTAATACGACtaaggggtggaggaggagcgaccACATAGCA
TCGCAAGAACCCCCGCATTTTTCATTCCGCCTGAGAGGCTTTTATCAAGT
TGTGCTGGTATGGCCCCCCTGACACCGTACAGTCTGTTAAAAGGACCTTC
AAATTGGAGGTCGAAATCGATGCTGCTACATTTAGCCATTCTTTTTCTAC
ATCATTCTTGTGCGACCGCGGACAGTGTGTCACCCAAGAGCAATCGAGTG
TGGTGCGGGAGGTCGCGCACGAACTCAACATGGACACCAATTCCTCCTGT
CCCAATGGGAAGACTggctgtttttttttttccggaaagacaaaaaggaa
aagacaaCGAGAGGTCCATCAAAGCAATCAAGATGAGATCGAATAACACA
GGAGATGCGAAGGTCAAACCGGCTGTTGCCATGAAAAGCCCGAGTCTTAC
AGATGTACCGCTTTGGGCCTCCAACCATCCTTCTTCGTCGGTCTCTTCGC
TGCCCGTAACCGACCGCACTCCTCCCGCACATTTGAATAGAACACCGCCG
ACTGCAGACAACGCCGGTGTCCGATCGGGATGGACGGTTCCCCGGCGCTG
GGTCGGTCTGCTAGTAGACGAGTGGCAGTTCCGCGTTGAGAGCCTTGACT
CCTACCGCCGTGTGGTCCGAAGCCGGTTGGATGACTCTTTAACACGTTTT
CAGACACATTACGAGGCGGCCTCCCGGGATGTGCGCAGGGATATGGATAA
GCAGCTCGCCAAGGCCTCTGCTCTACAAGAGGACTACATGGAGCGCATtg
cccagcagcagcagcgcctgGCAGAGCTCACGCGTTCTGAATTGCGCAGT
CGCCAGCAGGGATTCAACCAAAGCCTCGAGCAGTTCAAGCGCCAGTACGA
CGACACCTGGGGCCGCTTCTCGGGAACGGTGCGGAAGCTCGGTCCCTTCA
CCAAGGCCGAAGTGGCGGAGCAGCAACGCCGCCTGGACGAGACTTTTCAG
CAGTTTATGACGCAGTACCTGAACAGTACCGCTGAGGTCCGCGGCTACAT
TGATCGGATGATGCACATCTCTAGCGACGtcttccctcgcctctcCATGG
AAGACGACCAAGTCCGGGGCCTGGTGCAGCgcctgcgggaagaagaggta
gcCAAGCTGGCCCGGCTGGGGAAAGCCGGTGTCCGCGTCGAGCGAGCGCG
GCTggaaggcgtggtggagaggctgcgggagcagcaggaaCGGATGCTGC
GGCACTGGTCGCACCAGCGCGGGGAGCTTGACGCGACGCTGAAGCGAGTG
ATGGAGCAGCTCTTGAATTTCAACCGGCTCTACGACGACCTGATTGCCCG
CAAGGAGTCCAACCTGTATGCGGACTCCCTCAACGACAAAGTCCTTCGTC
GGGTGCTCGAGTGCCTGGACCAAGGAGAGGCAGACGGATGGGAACTCGTC
TCGGACGCCAAGGGCGTGACCGTGCACCGCAAGAATCTTCCCTCCATGGA
CGGGCGCGTGTCCAAATACTGCTGCATCAAGGCCAGCGGCACTCTGGCCG
CCAGCCCGGACGacattctctccctcttcgccgaCAATACGCGAGTGCCT
GAATACAACAAGTTCTACGCGGAAGGTCGTGACCTGGAGGCAATCAACGA
ACACACCAAGGTGGTATGGGCGGCCAGTCCACCTATGTTTTTCTTCAAAC
CTCGAGACTTCTGCACAGTTGTGCACTACCGCAAGCTGCAAGACGGCACT
GTCGTTGTCGTCAACCGCGGAGCCGAGCATCCTGAGGCGCCTCGGACGGA
CAAATACGTGCGCGCTGAGATTCTCATGGGCGCCAACATCATCCAACCCG
TGCCCGGCAAGCCCCACAACGCCGTTTTCACGATCGTCACGCAGGTCGAC
CCAGGGGGCTTCGCGCCCCCCGCGATCGTCAATAAGGTCACCTCTTGGGG
CCCTCCAACCTTTTTCAGAGAGGTAGAGGCGGCAGCGAGGACCACACACA
AAATCCCTGCTCCGATGCGGGTAAAGGATGCGGCCCCTAGCCCTGAGTCC
CCGGCCACAGCATCGACTGCCCCGTCTAGGACCTCCATGCCTAATAGggt
ttcccgccctccgcctttgTTGCCCTCTGAAAGGGCTCGACGAGGGATGT
GAAAATCGTTTCGGCTGTGTTTAGAAGGTGTACAAAGGCCGCAGGATAAA
AATGAAGCTTATCAAAAGCTAAGCGTTCCGAAAGCTgagttttccttctt
ctgtTACTCTCTTTTCAggtttttttttccctatcCGAGAGACAGAACCA
TCTTGATGTCGATTGAAACGTCTTACTTCACGAGATTGATCCACGTCAGT
AGCCCTTGGGCCACCGACTCCTTC back to topCoding sequence (CDS) from alignment at CM002471.1:417120..420143+ >rna7362 ID=rna7362|Name=rna7362|organism=Nannochloropsis gaditana|type=CDS|length=2043bp|location=Sequence derived from alignment at CM002471.1:417120..420143+ (Nannochloropsis gaditana)
ATGGCCCCCCTGACACCGTACAGTCTGTTAAAAGGACCTTCAAATTGGAG
GTCGAAATCGATGCTGCTACATTTAGCCATTCTTTTTCTACATCATTCTT
GTGCGACCGCGGACAGTGTGTCACCCAAGAGCAATCGAGTGTGGTGCGGG
AGGTCGCGCACGAACTCAACATGGACACCAATTCCTCCTGTCCCAATGGG
AAGACTggctgtttttttttttccggaaagacaaaaaggaaaagacaaCG
AGAGGTCCATCAAAGCAATCAAGATGAGATCGAATAACACAGGAGATGCG
AAGGTCAAACCGGCTGTTGCCATGAAAAGCCCGAGTCTTACAGATGTACC
GCTTTGGGCCTCCAACCATCCTTCTTCGTCGGTCTCTTCGCTGCCCGTAA
CCGACCGCACTCCTCCCGCACATTTGAATAGAACACCGCCGACTGCAGAC
AACGCCGGTGTCCGATCGGGATGGACGGTTCCCCGGCGCTGGGTCGGTCT
GCTAGTAGACGAGTGGCAGTTCCGCGTTGAGAGCCTTGACTCCTACCGCC
GTGTGGTCCGAAGCCGGTTGGATGACTCTTTAACACGTTTTCAGACACAT
TACGAGGCGGCCTCCCGGGATGTGCGCAGGGATATGGATAAGCAGCTCGC
CAAGGCCTCTGCTCTACAAGAGGACTACATGGAGCGCATtgcccagcagc
agcagcgcctgGCAGAGCTCACGCGTTCTGAATTGCGCAGTCGCCAGCAG
GGATTCAACCAAAGCCTCGAGCAGTTCAAGCGCCAGTACGACGACACCTG
GGGCCGCTTCTCGGGAACGGTGCGGAAGCTCGGTCCCTTCACCAAGGCCG
AAGTGGCGGAGCAGCAACGCCGCCTGGACGAGACTTTTCAGCAGTTTATG
ACGCAGTACCTGAACAGTACCGCTGAGGTCCGCGGCTACATTGATCGGAT
GATGCACATCTCTAGCGACGtcttccctcgcctctcCATGGAAGACGACC
AAGTCCGGGGCCTGGTGCAGCgcctgcgggaagaagaggtagcCAAGCTG
GCCCGGCTGGGGAAAGCCGGTGTCCGCGTCGAGCGAGCGCGGCTggaagg
cgtggtggagaggctgcgggagcagcaggaaCGGATGCTGCGGCACTGGT
CGCACCAGCGCGGGGAGCTTGACGCGACGCTGAAGCGAGTGATGGAGCAG
CTCTTGAATTTCAACCGGCTCTACGACGACCTGATTGCCCGCAAGGAGTC
CAACCTGTATGCGGACTCCCTCAACGACAAAGTCCTTCGTCGGGTGCTCG
AGTGCCTGGACCAAGGAGAGGCAGACGGATGGGAACTCGTCTCGGACGCC
AAGGGCGTGACCGTGCACCGCAAGAATCTTCCCTCCATGGACGGGCGCGT
GTCCAAATACTGCTGCATCAAGGCCAGCGGCACTCTGGCCGCCAGCCCGG
ACGacattctctccctcttcgccgaCAATACGCGAGTGCCTGAATACAAC
AAGTTCTACGCGGAAGGTCGTGACCTGGAGGCAATCAACGAACACACCAA
GGTGGTATGGGCGGCCAGTCCACCTATGTTTTTCTTCAAACCTCGAGACT
TCTGCACAGTTGTGCACTACCGCAAGCTGCAAGACGGCACTGTCGTTGTC
GTCAACCGCGGAGCCGAGCATCCTGAGGCGCCTCGGACGGACAAATACGT
GCGCGCTGAGATTCTCATGGGCGCCAACATCATCCAACCCGTGCCCGGCA
AGCCCCACAACGCCGTTTTCACGATCGTCACGCAGGTCGACCCAGGGGGC
TTCGCGCCCCCCGCGATCGTCAATAAGGTCACCTCTTGGGGCCCTCCAAC
CTTTTTCAGAGAGGTAGAGGCGGCAGCGAGGACCACACACAAAATCCCTG
CTCCGATGCGGGTAAAGGATGCGGCCCCTAGCCCTGAGTCCCCGGCCACA
GCATCGACTGCCCCGTCTAGGACCTCCATGCCTAATAGggtttcccgccc
tccgcctttgTTGCCCTCTGAAAGGGCTCGACGAGGGATGTGA back to top
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