EWM23326.1, cds7345 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|585104333|gb|EWM23326.1| (lipid transfer protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 1405.96 bits (3638), Expect = 0.000e+0 Identity = 680/680 (100.00%), Postives = 680/680 (100.00%), Query Frame = 0
Query: 1 MAPLTPYSLLKGPSNWRSKSMLLHLAILFLHHSCATADSVSPKSNRVWCGRSRTNSTWTPIPPVPMGRLAVFFFPERQKGKDNERSIKAIKMRSNNTGDAKVKPAVAMKSPSLTDVPLWASNHPSSSVSSLPVTDRTPPAHLNRTPPTADNAGVRSGWTVPRRWVGLLVDEWQFRVESLDSYRRVVRSRLDDSLTRFQTHYEAASRDVRRDMDKQLAKASALQEDYMERIAQQQQRLAELTRSELRSRQQGFNQSLEQFKRQYDDTWGRFSGTVRKLGPFTKAEVAEQQRRLDETFQQFMTQYLNSTAEVRGYIDRMMHISSDVFPRLSMEDDQVRGLVQRLREEEVAKLARLGKAGVRVERARLEGVVERLREQQERMLRHWSHQRGELDATLKRVMEQLLNFNRLYDDLIARKESNLYADSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAARTTHKIPAPMRVKDAAPSPESPATASTAPSRTSMPNRVSRPPPLLPSERARRGM 680
MAPLTPYSLLKGPSNWRSKSMLLHLAILFLHHSCATADSVSPKSNRVWCGRSRTNSTWTPIPPVPMGRLAVFFFPERQKGKDNERSIKAIKMRSNNTGDAKVKPAVAMKSPSLTDVPLWASNHPSSSVSSLPVTDRTPPAHLNRTPPTADNAGVRSGWTVPRRWVGLLVDEWQFRVESLDSYRRVVRSRLDDSLTRFQTHYEAASRDVRRDMDKQLAKASALQEDYMERIAQQQQRLAELTRSELRSRQQGFNQSLEQFKRQYDDTWGRFSGTVRKLGPFTKAEVAEQQRRLDETFQQFMTQYLNSTAEVRGYIDRMMHISSDVFPRLSMEDDQVRGLVQRLREEEVAKLARLGKAGVRVERARLEGVVERLREQQERMLRHWSHQRGELDATLKRVMEQLLNFNRLYDDLIARKESNLYADSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAARTTHKIPAPMRVKDAAPSPESPATASTAPSRTSMPNRVSRPPPLLPSERARRGM
Sbjct: 1 MAPLTPYSLLKGPSNWRSKSMLLHLAILFLHHSCATADSVSPKSNRVWCGRSRTNSTWTPIPPVPMGRLAVFFFPERQKGKDNERSIKAIKMRSNNTGDAKVKPAVAMKSPSLTDVPLWASNHPSSSVSSLPVTDRTPPAHLNRTPPTADNAGVRSGWTVPRRWVGLLVDEWQFRVESLDSYRRVVRSRLDDSLTRFQTHYEAASRDVRRDMDKQLAKASALQEDYMERIAQQQQRLAELTRSELRSRQQGFNQSLEQFKRQYDDTWGRFSGTVRKLGPFTKAEVAEQQRRLDETFQQFMTQYLNSTAEVRGYIDRMMHISSDVFPRLSMEDDQVRGLVQRLREEEVAKLARLGKAGVRVERARLEGVVERLREQQERMLRHWSHQRGELDATLKRVMEQLLNFNRLYDDLIARKESNLYADSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAARTTHKIPAPMRVKDAAPSPESPATASTAPSRTSMPNRVSRPPPLLPSERARRGM 680
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|298712865|emb|CBJ33383.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 202.986 bits (515), Expect = 2.574e-53 Identity = 109/267 (40.82%), Postives = 166/267 (62.17%), Query Frame = 0
Query: 364 RLEGVVERLREQQERMLRHWSHQRGELDATLKRVMEQLLNFNRLYDDLIARKESNLYADSLNDKVLRRVLE-CLDQGEADGWE-LVSDAKG-VTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASP-PMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAA 626
+++GV E E+Q + + ++ ++ ++ V +LYD+ + K++ + N+ RR LE L+ E GWE +VS G ++V RK + G SK+ CI+A ++ + I + + RV EYNK++ EGRDLE ++E+TKVVWA+SP P+ F KPRDF TVVH R+L+DG+++VVNRG +HPEAP + +YVR E+++ AN+I+P P + FT++TQVDPGG AP IVNK+++ P F VE AA
Sbjct: 269 QIQGVREEWFERQAVLREQLTRRQQDIAERMRAVTIDSKIMAKLYDEFLMGKKAKIDTSVANEDSFRRALELILEDTEEGGWERVVSTRNGALSVERKFIGKNSGG-SKFACIRAWCSMDVPAEAIAEMMESSERVKEYNKWFLEGRDLELLDENTKVVWASSPSPLPFVKPRDFVTVVHVRRLEDGSIIVVNRGYKHPEAPPSTEYVRGEVILAANVIRPDPKDRNRTQFTLLTQVDPGGIAPAWIVNKISAHDPVDFLERVETAA 534
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|299469624|emb|CBN76478.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 162.925 bits (411), Expect = 9.510e-40 Identity = 96/231 (41.56%), Postives = 125/231 (54.11%), Query Frame = 0
Query: 425 NDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSM----------------DGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFA----PPAIVNKVTSWGPPTFFREVEAAARTTHKIPAP 635
ND + VL + E+DGWE V++ GV V RK +P +G +K+ C+KA GTL A D+ LF DN RV EYN E RDLE +++ TKV WA +P FK RDF T VHYR L+DGT++V+NR EHP A R KYVRAEIL+ NI++P P F VT ++PGG A IVNK+ + P +E R+ + P P
Sbjct: 251 NDASVEAVLAVI---ESDGWERVTEKSGVVVVRKFVPPPPKAPSSSSSSSRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALE---RSANSAPVP 475
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|299472189|emb|CBN79692.2| (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 164.081 bits (414), Expect = 1.544e-39 Identity = 77/163 (47.24%), Postives = 108/163 (66.26%), Query Frame = 0
Query: 469 KYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAP----PAIVNKVTSWGPPTFFREVEAAAR 627
++ C+KAS L+ P+ + LFADN+RV EYN+ E +DLE +++ +K+ WAAS M FK RDFCT+VH+R L DGT+ V++ EHP APRT +YVR+EIL+ N ++PVPG P F +VT V+PGG A +VN + + P TF R +E AA+
Sbjct: 400 QFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAK 562
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|551656396|ref|XP_005830971.1| (hypothetical protein GUITHDRAFT_153123 [Guillardia theta CCMP2712] >gi|428175099|gb|EKX43991.1| hypothetical protein GUITHDRAFT_153123 [Guillardia theta CCMP2712]) HSP 1 Score: 149.828 bits (377), Expect = 1.143e-35 Identity = 79/209 (37.80%), Postives = 112/209 (53.59%), Query Frame = 0
Query: 422 DSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFA----PPAIVNKVTSWGPPTFFREVEAAA 626
+ N +L R+ L DGWE V GV V+RK + + K+ C+KA G + A DI L D+ RV EYN+ A+ RDL A++ TKV WAAS F FKPRDF T VH +L DGT V+++R + YVR E+L+ N+++P P P+ FT + ++PGG A I N++ GP +F R++E
Sbjct: 205 EGTNKMLLGRLFTVL---AGDGWEHVLHQDGVDVYRKRIVDLYQGGEKFYCVKAVGVIDAKAADIYELLKDSARVDEYNEECAQVRDLSALSSDTKVTWAASKTYFPFKPRDFVTRVHNTQLNDGTYVIMSRSEDVDFTDGGADYVRTEVLLAGNVMRPCPDDPNKTEFTTIAHINPGGAADTPLGAQITNRICIHGPVSFIRKIETVC 410
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|551655476|ref|XP_005830512.1| (hypothetical protein GUITHDRAFT_110336 [Guillardia theta CCMP2712] >gi|428174638|gb|EKX43532.1| hypothetical protein GUITHDRAFT_110336 [Guillardia theta CCMP2712]) HSP 1 Score: 140.584 bits (353), Expect = 1.523e-31 Identity = 78/224 (34.82%), Postives = 127/224 (56.70%), Query Frame = 0
Query: 424 LNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPS--------MDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKP--RDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAP----PAIVNKVTSWGPPTFFREVEAAARTTHKIP 633
+ND ++ V LD + W++VS G+ + RK LP+ +D + SK+ C+KA + A + + LF DN+RV EYN++ E RDLE ++E+TK+ + S +P RDF T VHYR + + +VVNRG EHP A + Y R E+ +GANI++ + P+ +FT++T V+PGG A + N++++ P F +++ AA ++P
Sbjct: 308 VNDNLVEAVETLLDDKD---WQMVSADAGINIWRKYLPADMVVAGKKID-KASKFACVKAQAVIDAPLEKVYDLFVDNSRVREYNEYCKEVRDLEWLDENTKITHSLSG-----RPWSRDFVTRVHYRSIGEDVKMVVNRGEEHPLATKQAGYTRMEMSLGANIMRRLDSDPNKTLFTLITHVNPGGLATTQFGAMLTNRLSTESPRQFLQKLNEAAAAGQQLP 522
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|298706175|emb|CBJ49103.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.02 bits (310), Expect = 1.921e-28 Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 0
Query: 443 GWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGR-DLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQD--GTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKP 585
GWE V+ GVTV +K P D KY C+KA G + S +++S+ D+TRV EYN+ Y++GR D+E + HTK+VW + P K DFCT++H + L D G+ +++ R EHP+AP D +VR+EIL+G I++P G P
Sbjct: 58 GWEEVAHRGGVTVWKKYFPK-DEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNR-YSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDP 201
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|585110441|gb|EWM28098.1| (Lipid-binding START [Nannochloropsis gaditana]) HSP 1 Score: 129.028 bits (323), Expect = 2.437e-28 Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = 0
Query: 440 EADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRD-LEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAARTTHKIP 633
E GW VSD + + R+NL + D +Y C+K S L ASP+ ++ L D+ RV EYNK Y++GRD + + HTK+VW + P K +FCT++H + DG+ V++ + +HPE PR+ ++ R+EI++G ++P P P+ A T ++ V G PP I K + G F + A K P
Sbjct: 222 EGGGWHPVSDKEDTKIWRRNL-AEDAYGREYPCLKLSTVLHASPEAVMDLLVDSERVGEYNK-YSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPDGSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSAGI-PPFIAEKFSVRGVVDFAESLRKALHLERKGP 413
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|551635647|ref|XP_005820655.1| (hypothetical protein GUITHDRAFT_81208 [Guillardia theta CCMP2712] >gi|428164657|gb|EKX33675.1| hypothetical protein GUITHDRAFT_81208 [Guillardia theta CCMP2712]) HSP 1 Score: 120.553 bits (301), Expect = 1.374e-27 Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0
Query: 440 EADGWELVSDAKGVTVHRKNLPS-------MDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFA----PPAIVNKVTSWGPPTFFREVE 623
E+DGWE VS + V R+ LP+ G SK+ C+KA+ + A + + LF DN R EYN++ E DLE ++E TK+ + + R+F T VHYR + + ++VNR +HP A Y R + +GAN+++ V P FT++T VDPGG A + N++++ P F +++
Sbjct: 2 ESDGWEEVSSEGNIKVWRRFLPADLEIAGLKVGSASKFACVKATAVIDAPLEKVFELFTDNARAHEYNEYCKEILDLEWLSEDTKITQTRTGRPW---SREFVTRVHYRSIGEDAKLIVNRAEDHPLAKHAPGYTRMNMPLGANLLKKVSSDPSKTEFTLITHVDPGGLANTKFGAMVTNRLSTESPRQFLEKLQ 193
BLAST of EWM23326.1 vs. NCBI_GenBank
Match: gi|585099982|gb|EWM20404.1| (START-like domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 112.849 bits (281), Expect = 9.420e-25 Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 0
Query: 420 YADSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAI 512
+ ++ N+ +L RVL +++ EA GWE V+ +G+TVHRK +P+++G +SK+CC++ASG L AS D+ LF NTRV EYNK++AEGRDLE +
Sbjct: 122 HVEAANEHMLSRVLSVMNETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLDVADLFEGNTRVAEYNKYFAEGRDLEHV 214 The following BLAST results are available for this feature:
BLAST of EWM23326.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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