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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100057g6.3904.mrna |
| Orig protein id | gnl|cribi|Naga_100057g6.3904 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:373089..373981 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7342 ID=rna7342|Name=rna7342|organism=Nannochloropsis gaditana|type=mRNA|length=3825bp
GTGGTGTGCATTGAGGGCTGTCTTTCCTCGCCCTCAGCGATCAGTAATTC
TTTCCCCCTGTTTCCATGTCCTCCTCACCTGCCTTTCTCACGCACGCACA
CAATTACAGCGCAAGCCATCCGTGGCGGTTAGAGCCCAGAGGCCAATGCC
GGGAGGTGGTGTGGTGGGCGTCCGGACGAAGAAGAGGACCAAAATGCCGC
TAAATGGTGGCATGATGTGGGGCAAGACCATCCTCACGCCCCCCCCTCCC
TCTTCCTCTCCGGCATCATCCTTGTTGTCCTCTCCAAAAGGCCCGATCAC
AACGCGCAAGCATTCATCCCTCCTTTATCTCACCGTGAAGCCAGACTATT
TGGTTATTCGGGCGCCGTGCGGTCCTCACTCTCCGAAAACGCAACAGGGG
CTGGACCCTGTCCTGGTGCTGAGGGCCCCCCCGTCCACCCCCCGCACTGG
ACCCCGGTGGCCCCAGGCAGACGGCGATCCTGTCTCCCCTCCCCCCGACA
CTCGAGGCGCTGGGAGCAACAGCGTGACTGTGGAAGTGAAGGATTTCCAG
ACAGCCGTGCGGGACGGAGACATCGTCGGGAGCGAGGAGGAGCGAGAGAT
CCAGGGCATCCTCGGCCTTGTCTACCTCCTGGGGGGGGCATACCTGCTGG
TCATCGAGGCCTCCGAGATCGTCGGCACCTCCCCACGCGGTAGTAATCTC
ACCGACAAAACCAGCAGCTTCAGCATTCATCGAGTCCAGAAGATGGGAAT
GCTCCCCGTCTCGCGCCGGCAGCAGACAGGGCCCCACCCGCAACAGCACC
CGGCGCTAAGCTCCCCGGGGCAACGCTGCGACGAGGAGAGGTACCTGCGT
ATGCTGCAGGCGCCGGTGGTGGCAGGGTCTCTATACTTCAGTCCGCGATA
TCCTTTGCACCGTAGCTTGCAGGAAAACATTCGGCGTTGCCCCGGGCTGG
ACTTCGAGTCGACGGCCCCCGCCTTTTGGGGGGAGGAGGCGGCCACGGGG
AGGGAGGGGGGGGGGCTGGGCGACGTTGACAGCCCTGCATACGCGCTCAT
GGCCAAGAATGGCAGCTCTAGGAGAGGGACAGACAGTAGAGCGGCCTCCT
CCTCCTCCACCTCCTCCTTTTCCTCGTCGTCGTCCTCCTCCTCGAACCTG
ACATCTCCCTCCCCCTCGACCTCCCTTCCCTTCCTGTGGAACGGCTTTCT
TTTATCCAACCTTGGGCCCGCACGTCTCTTCTGGGGCACTGCATGCATCA
GTGGCTACGCAGTCTCGCGCTCCATTCCCCTGGACGGCGCACGGAAAGGC
GCTGGCGAGGCGGCGAGGTTGACGCTCCTCAGTCGCCGCAGCACCAGGAT
GCAGGGCACTCGCTTCTACCGGCGCGGGGCCAACAAGGAAGGGGCAGTGG
CCAATTTTGTGGAGACGGAGGTCATTCTGGCACTCCCCGAGGGTGCGAGA
GGAAATAGGGAGGGCCCCGAGACGCTCCTGCTCTCGCATGTGCAAGTCCG
AGGCTCCATTCCGTTGACCTGGTCGCAAGAACCCACACTCGAATGGCAGC
CATGCGTGCGTCTCTCGCCCGGCTTGCCCACGCCACCCTCTTCCTCCTTG
AGCCTGGCCAGTCATGGCTCGGGCGGCGGCTCAGGAAGAGGGGGTCTTCA
AGTGTCGGTGACGGCCGCGCACTTGGAGCAGCTCACTTCCAACTACAGGG
ACATCCTGCTCGTTAATCTCGTCGACTCCGGAGGATCAAGCAAACACTCG
CAGGCGCAGGCAGCGCTGGGTCGACGGCTACAGGAGGAGGTGGAGAAATT
GGCGGCCTACGTGCCGTTGGATGAATTTGGAGAGGAGGGGAGAGGGGCCT
TGGAAAGAGAGGGAGAGGAAGGGGCGAAAACGGAGGCGACCAAGTCCCGC
TCGACGCCCGCGCCTGACAGAGAAGATGATGGAAGAACATCAGCGTTTGC
GGAGCGGAAGGGGAAAGGAGGGTCGCCGCGCGTGAGTCTGACCTGGTTCG
ACTTCCACAAGGAGTGCGGATCTTACAAGAAGTGGGGGAGGCTCAAGACG
CACCTTCTCGCCCAGATTGACGCACTCTTGTCCAGCCAGGGGTGGACTAT
GGTGCGAATTTATGATGTTGGCAAGCAAGTGGGCCAGGGGGGATGCGCGG
ACAAGGAGAAGACGCGAGAAGGAGAGAGAGCAGGCGGGCAGGGGGTGTGG
GAGGAGGCTTCAGCTGAGGAGATCGTCCTGCGGGAGCAAGAGGGGGTGGT
GCGGACGAACTGTATGGATAATCTAGACCGGACCAACGTGGTGCAGAGCA
TGGTGGCTGGCCGCGTTTTGCGCCACGCTCTCAGCTCCCTCCCGGCGGGC
GCTCTTGCCCCCGACCCCGCGTCCCTCGAGCGAGAGCTGACGACCTTGTG
GGTGGAGAATGCCGACGCGCTCAGCACCTTGTACGCAGGCACTCCCGCGC
TGAAGACCGACTTTGTCCTGACGGGGCGCAGAACGATTAAGGGCATGCTC
CTCGATGGCCTGTACGCAGTGACGCGCCTGTATATTAACAACTTTTGGGA
CGGATACCGGCAGGACTGCGTCTCCCTCTGGCTGGGCGAGTATTGCCCTC
GCGGGCCCTCCCCGACCCATGCTCCCATCAGTCCCTTTCCTCCCTATCGC
CTCCCATTTACCCCCGGGGGGATTTTTTTCACCCTTTCTGTGGCTTTACA
GGAGCTCCCGCCCTTTCAGCTGACCCTTCAAGCTGGCGCGCTTCTCACTG
AGGCTGTGGTCAGTCTCGCCCAGGCGCTGGTTGGATCGGCGGCCACAGCC
TCGTCTTCGCTGGGGGGGCGGGACGAAAGTCCGTCGGCTCCACCTTCCTG
GTGGGTATTGGCGGTCTTCAGCTACATGATGTTCCTCCTCTTCTGGGTAG
CCCTGTGGGAGTGCGTGCTCTTCCTGGGCCCCTTCGCCACGCTGCGGACA
CTGCGACATCACAGGTATCTGCTAACGGATCGACCGCGCCTGGTCGAGAA
AGATGGGGAAGCTGGGAAAGATGGTAACGGTAGGGAGGCCACTTAGAGGA
ATCAGCTGTTGGAGGCGGGGAGTTTTGTTGATTTCGGGACTTGACAGGGC
CGGGCACTGAGGGCAGGGCGAGATTCTGACTAGGCACTCCTTCAGCCTGT
TGTACATAGGGAAGGGTTGATGTCCGGTAAAGCGTAAGCACGCAAGCACG
GACCTAGGACTTTGAGCGCGGCATGAGGGATACAAGGCATCAGCCCGATT
ACTATCAAGAGACTGAGAGAAGGCGTAGATCAAGACGGGGATATTTTTCA
TGATGAGCGTAACACGAAGAAAAAATTTTGCGAAGGGATTTTTGAACGGA
AAATAGATTGGAAAGAAAAGTGGGATCGATGAGGAGATCTATGAAAGAGC
GGACGACGGATAGAGTTAATGGTGGAATCGCTCCCAGCTCTGAGCAGGAC
GCATTTTTGGCGAATCAGCACATGCATGGTCAACCAAGAAGGAATAAGAG
GGGGATTCTGGTCGAAATGAGGGGATAGGATATGATGAGGAAGGCAGAGG
CTACTGCGATGATGGGAGAAGTGCAGTGCAGGGCAGGAAGAACCGAGCCC
AGTTGATGCGAGAAGGCGGATGCAGTCGTCTGATTTTTACTGCCACTTGA
AGCGACAGGAAAAAGAGCGGCCAGAAATCGAATGAAGGGGGGTGAAAAGG
CGCCGCTGCCGGTTACATTGTCATTGTATGGCGTGCATGGTGCAGCGAGG
CCTCACAGCATCTAAGAAAAGGGAGTAAATCCGCAGGGGCAGTAACAAGA
AATCAAGTTTTGCGATGCTCACGTG back to topprotein sequence of rna7342 >rna7342-protein ID=rna7342-protein|Name=rna7342|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MPFIFFFASSIANLGGGRKRRRRERRWAQDALRDDEYIEMLENEATRKRK
KQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYL
RIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVP
DPAGGDRN back to topmRNA from alignment at CM002471.1:373089..373981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7342 ID=rna7342|Name=rna7342|organism=Nannochloropsis gaditana|type=mRNA|length=893bp|location=Sequence derived from alignment at CM002471.1:373089..373981- (Nannochloropsis gaditana)
ATGCCGTTCATATTTTTCTTTGCCTCATCCATCGCCAACCTAGGTGGGGG
CAGGAAAAGACGAAGACGAGAGCGGCGATGGGCTCAAGATGCTCTACGGG
ACGACGAGTACATCGAAATGCTTGAAAACGAGGCCACGAGGAAAAGAAAG
AAGCAACTGCCAGAAATCAGCATCCAGCCCCGGCAGCCGAACGAGGTAGG
TCCAGGATGAAAACTTAAAAAGGCCTTCTTTGGAGGCAGTTCATTTTACT
TTTTATCCCTCACCTTACCAGAGCATGAAGGCATTCCAACACCGGGTTCG
CCAAGACTCGAAAGCCCTCCTTCGAGAGAGCAACCTGGCCAACAGCACCA
CCAAGGCTCGCCGTCGCGAGTATCTGAGAATAAGGAAAGCGAACAAGAAA
CGCAAAGCCCAGGGCCTGCCTCCCTTGCCTCACCGCTCGAGGGGCCAGGA
GGAATGCGACGGACGAGAGAATCAAGGAGGCTTGATGGACCCCGCGCCCT
CCTTCGCGGCCGCCGAGACCGTGCCGTTCGGACAGACCAATGACGCGCCT
CCCGATCTCCGCCTGCCCCGCTTGCCGGACAAGCTTAAGGCTGGGGCGAG
ACCAATCGACGGGCGCCACGGTCAAGCCCCGCAGAGACCCGGCGGGAGGA
GACAGGAACTGAAGGCAAATGAGAGCGGAGAGAAGGAGGGGCCAGTTGCC
AAGGCGGCCGCCGCACGCGCTAAGCAATCTCCCGCTGAGAAGGCGGATTG
GGCCAAGCTGAGGGAAGAGGCGCAGCAGGCTTACCGCGCCATGAAGGAGG
GCAAGGAACAACAAGAGCTTACTTCAAAATTTGTGTGAAGGCATATGTGA
AGAAAAATTTGCCAAAACAAAAAGAAGGGGGGAGAGGGCCTCG back to topCoding sequence (CDS) from alignment at CM002471.1:373089..373981- >rna7342 ID=rna7342|Name=rna7342|organism=Nannochloropsis gaditana|type=CDS|length=1431bp|location=Sequence derived from alignment at CM002471.1:373089..373981- (Nannochloropsis gaditana)
AGACCCGGCGGGAGGAGACAGGAACTGAAGCATGAAGGCATTCCAACACC
GGGTTCGCCAAGACTCGAAAGCCCTCCTTCGAGAGAGCAACCTGGCCAAC
AGCACCACCAAGGCTCGCCGTCGCGAGTATCTGAGAATAAGGAAAGCGAA
CAAGAAACGCAAAGCCCAGGGCCTGCCTCCCTTGCCTCACCGCTCGAGGG
GCCAGGAGGAATGCGACGGACGAGAGAATCAAGGAGGCTTGATGGACCCC
GCGCCCTCCTTCGCGGCCGCCGAGACCGTGCCATGCCGTTCATATTTTTC
TTTGCCTCATCCATCGCCAACCTAGGTGGGGGCAGGAAAAGACGAAGACG
AGAGCGGCGATGGGCTCAAGATGCTCTACGGGACGACGAGTACATCGAAA
TGCTTGAAAACGAGGCCACGAGGAAAAGAAAGAAGCAACTGCCAGAAATC
AGCATCCAGCCCCGGCAGCCGAACGAGAGACCCGGCGGGAGGAGACAGGA
ACTGAAGCATGAAGGCATTCCAACACCGGGTTCGCCAAGACTCGAAAGCC
CTCCTTCGAGAGAGCAACCTGGCCAACAGCACCACCAAGGCTCGCCGTCG
CGAGTATCTGAGAATAAGGAAAGCGAACAAGAAACGCAAAGCCCAGGGCC
TGCCTCCCTTGCCTCACCGCTCGAGGGGCCAGGAGGAATGCGACGGACGA
GAGAATCAAGGAGGCTTGATGGACCCCGCGCCCTCCTTCGCGGCCGCCGA
GACCGTGCCATGCCGTTCATATTTTTCTTTGCCTCATCCATCGCCAACCT
AGGTGGGGGCAGGAAAAGACGAAGACGAGAGCGGCGATGGGCTCAAGATG
CTCTACGGGACGACGAGTACATCGAAATGCTTGAAAACGAGGCCACGAGG
AAAAGAAAGAAGCAACTGCCAGAAATCAGCATCCAGCCCCGGCAGCCGAA
CGAGAGACCCGGCGGGAGGAGACAGGAACTGAAGCATGAAGGCATTCCAA
CACCGGGTTCGCCAAGACTCGAAAGCCCTCCTTCGAGAGAGCAACCTGGC
CAACAGCACCACCAAGGCTCGCCGTCGCGAGTATCTGAGAATAAGGAAAG
CGAACAAGAAACGCAAAGCCCAGGGCCTGCCTCCCTTGCCTCACCGCTCG
AGGGGCCAGGAGGAATGCGACGGACGAGAGAATCAAGGAGGCTTGATGGA
CCCCGCGCCCTCCTTCGCGGCCGCCGAGACCGTGCCATGCCGTTCATATT
TTTCTTTGCCTCATCCATCGCCAACCTAGGTGGGGGCAGGAAAAGACGAA
GACGAGAGCGGCGATGGGCTCAAGATGCTCTACGGGACGACGAGTACATC
GAAATGCTTGAAAACGAGGCCACGAGGAAAAGAAAGAAGCAACTGCCAGA
AATCAGCATCCAGCCCCGGCAGCCGAACGAG back to top
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