EWM23345.1, cds7325 (CDS) Nannochloropsis gaditana

Overview
NameEWM23345.1
Unique Namecds7325
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:373787..373981 -
Alignment locationCM002471.1:373457..373710 -
Alignment locationCM002471.1:373320..373347 -

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Properties
Property NameValue
Protein idEWM23345.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100057g6.3904.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:373787..373981 -
CM002471.1supercontigCM002471.1:373457..373710 -
CM002471.1supercontigCM002471.1:373320..373347 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23345.1 vs. NCBI_GenBank
Match: gi|585104353|gb|EWM23345.1| (hypothetical protein Naga_100057g6 [Nannochloropsis gaditana])

HSP 1 Score: 322.013 bits (824), Expect = 2.387e-111
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MPFIFFFASSIANLGGGRKRRRRERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVPDPAGGDRN 158
            MPFIFFFASSIANLGGGRKRRRRERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVPDPAGGDRN
Sbjct:    1 MPFIFFFASSIANLGGGRKRRRRERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVPDPAGGDRN 158
[Close]
BLAST of EWM23345.1 vs. NCBI_GenBank
Match: gi|553194502|ref|XP_005855972.1| (hypothetical protein NGA_0523700, partial [Nannochloropsis gaditana CCMP526] >gi|422293080|gb|EKU20381.1| hypothetical protein NGA_0523700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 273.478 bits (698), Expect = 1.420e-90
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:   15 GGGRKRRRRERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVP 150
            GGGRKRRR+ERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVP
Sbjct:   29 GGGRKRRRQERRWAQDALRDDEYIEMLENEATRKRKKQLPEISIQPRQPNESMKAFQHRVRQDSKALLRESNLANSTTKARRREYLRIRKANKKRKAQGLPPLPHRSRGQEECDGRENQGGLMDPAPSFAAAETVP 164
The following BLAST results are available for this feature:
BLAST of EWM23345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104353|gb|EWM23345.1|2.387e-111100.00hypothetical protein Naga_100057g6 [Nannochloropsi... [more]
gi|553194502|ref|XP_005855972.1|1.420e-9099.26hypothetical protein NGA_0523700, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7342rna7342Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications