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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF2373 |
| Orig transcript id | gnl|cribi|Naga_100057g12.3930.mrna |
| Orig protein id | gnl|cribi|Naga_100057g12.3930 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:361261..362931 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7338 ID=rna7338|Name=rna7338|organism=Nannochloropsis gaditana|type=mRNA|length=1436bp
AAGAAAGAGCGGGCAGGTACCCCGAGCGGGCATGGAGGGCAGGAGACAGT
CTCCCAGTTCCTGGACAGCGACACGCGCGTCTGCCACGATTCCTTCCGGG
TGGCCTGCGTCGCCGCCGGCGCCGTGATACAGGCCGTGGACCAAGTTGCC
GCTGGCCGCCGCCGCGTTTTCGTCGCCACGCGGCCCCCAGGTCATCACGC
GGGTCCGCGCGGCGCCGTGCCCAGCCACTGCTTCTGGAAGGCCCCCTCTA
TGACCTCCTCTGGCTTCTGCCTGCTCAACAACGTGGCCATCGGGGCCGCT
TACGCCCGCCAGGCCTACGGCCGGGCCCCGCACGGGCCTTTCGCCCGCGT
CGCCATCGTGGACTTCGACATCCACCATGGGAACGGCACAGAGGACATCG
TCAGGGCCCTGCAGCCGAGTCGCCGCCTTCTGCCCCTGCCCGCCTCCTGG
GCGCCCGAGCACTACCAGCTCTTCAAGCCCTGGCTGAGCGAGGAGGAGGA
TGCAGCCAGTGTCTTCTTCGGGAGCATCAACCTGGTGGACGGGCCGCACT
TCTACCCCTGCTCGGGCAGGGAGATGGACAACGACCAGGCAGCCCCGAAC
ATCGTGAACGTGGAGCTCCGGCCCCTCCGGCCCCCTCAGGCGGCGCCGGG
CACAGGGAAGGCCAAAATGCTGGGTCCTCGAAAGGTGAAGGAGTACTGCC
AGCGGGCCAGCGTGGAATTTCGGGAGAAGGTCAGCAGCACGCTCCTTCCG
AAACTCAAGGCGTTCGCGCCCGACTTGCTCTTCATATCCGCGGGCTTTGA
CGGGCACGTGGAGGACCACTACCACTACTTGACTGAGGAGGACTATGCCT
GGATCACCCGCGAGCTCGTGGCCGTGGCCGAGGGCACATCCGGAAAGGTG
ATCAGCGTGCTGGAAGGCGGGTACCACGTCCGCCCCGACGGAGGGCCGGG
CAAGCGCCTCCCTGGCCGCCCGGCAAATTCCACGCGCGGGGCGAGGGCAC
CAAGCGGGGGGCCGAGTGGCGCGACGTCGGATGACGACGAGGCCGGGAGA
GACGGGGTCGTGAAGGACTGTCAGTCCCACATCAATGAGGAGACGGACGG
AGGCTTGGCGAAGGGAGTGATGGCGCATGTCATGGCCTTAATGGACGACG
CCGGCACTTTCAACATGGCGATGTGATCGTCTTGAGTAGGAGCCCATGGG
GGCGGTGGCGAGGGAAATGTGCTCTTATGTGGATAGCGAGCCAGACTGTG
CGTTCAAACAGAAACATAGACACCCACGTGGAACAATGTATTAACTACCT
TTCTTTTTGCGAGCTGCTGAACCGAAAGTCCATTTCCTGGCGGTAGAGTA
GGCGATCGAGGAGGACGATACTATTTTGTGCAGAAGTAACATTTCGATGT
GCGTGAAAGAAAGTGAATTATTTGATGTGGTAATCA back to topprotein sequence of rna7338 >rna7338-protein ID=rna7338-protein|Name=rna7338|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVW
ILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPV
RSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAA
LADAEGAKDEESTK back to topmRNA from alignment at CM002471.1:361261..362931+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7338 ID=rna7338|Name=rna7338|organism=Nannochloropsis gaditana|type=mRNA|length=1671bp|location=Sequence derived from alignment at CM002471.1:361261..362931+ (Nannochloropsis gaditana)
GATCGAAACTCTTGTAGGGAATTATGGATGATTCGACAGAGAGACTTATC
CCAAAATGGGCTTCCTTTTACCCTCGTTGTTTTCAATAAGTGATTTTGTG
CCCTGCTGCTCTTTTTTCACGCAGGACACGCGGGGgtcagagggggagga
gcctgTGACGATCACGGTTGAAGTTTGGTAATCCTGTCGAGTGAACCTAT
GGTTGAATAGAAAGACGGGTTTCCACGTTCCAATGTACACTGAGCCCTGG
TATCTTTTTACTTGTCCTGTGTTTGTATTGGATGCTCATACTGTGGAGGT
TTAAAGCCAGTGGGCTGGGCTTTATTAGAAAGCTGGTAATGGTGAACAAA
CCTCCCACTCTTATCTATACACGTTAGCGCTAGGAAGCGGATGCCTTCGA
CCAATCTGAATCCTGTTGCTGCTACTGAAAAGGCCCTTTCAGGAGGTAAa
cgaaagagaaagaagaagcgtAAGCTAGCCGCAGCACGGGCTGCCAACAC
CACTCCAAAGAGGACAAAAAAGAGTATTTCATCTGAGGAAGAGGTATGAT
ATATCGCGTCGCCATTAGGTTTAGAAATGTATAGCATAATCGTGCTTGTT
AGGAGAAAAAAATTATGGCGGTCGGGAGCTTCACGAAGAGAAGTCCGCGC
GATGACGATAAAAATGTGTAAAGCTGTACATTTGTAACCAGACGCATCAT
GCTCCATTCCCCTCGACCTATACACCACACAGAAGCATCTTCTAGAAAAA
GGGGCGCTAGCTGCGAGAGAATATCTGCAGCGATGGGCTCTACGGGTAAG
GATATGCTGTTAAATGCGGTGTTTGAAAAAAAGAATTCCGTGTTTCGTTG
CTTGGCAACGTCGTGGGTGACAGTGAGACACAGCTGTAATGGTAAGCGAT
CTCATCCACGCTATCTTGGACTCTATAAAAAGTGCTTATGTGCACCATCG
CATCATAGATCATGTAAAACAATTCTTTTGCGTCCGGGCACAggatcgag
gaggggagtggcGGTTCCAGACAAAACGACAGGTCTGGATTTTAAAGCAC
TTGTACTCGCAAAATGTCATCGACAAAACGTTTTTCAAAAAACTAGTGTT
GCCATACATAAGTACCTTGCACGGTGGCGCCAAAGAGGTAAGTAAGAGAC
GGGAAAAAGGATATTCTTTTTGTTGTCGGAGCGCTCTCTTCAGGGAATAT
GAAACGTTTCTGGTGGGGAAGCACGCATATCAATTCTCCACCTAATCAAT
GAAATCTTGTCTTCCGCCCTGCAGCGTGTTCTTACAGAGGCACAAGGGTA
TTTGCAGAGGGAGGCTGGACCTGTGAGATCTGATCTtgaaagcgaggaag
acaaggaggggaggggcgagggcggggagaaaggaagtgaCCGTCGTGAC
TCACGGGGGATGACTGAGGTTGGCGAGAGCACCAACCGAGTCAGGAGGAA
ACGCGCGAAAAAAATAGTTGCGGCATTGGCAGATGCAGAAGGTGCCAAAG
ACGAGGAAAGCACAAAGTAAAAGTGAAAAACGACAGGCGGCATCCACATT
CATTCGTCACGCTGCTTCTTATTTCTCAGTCGTCGAGGCACTTTTCACAA
ATACACAAACTTAGGCATGCCCGGGAGGGCTCACCGCGATTCGACGATTG
AAAACAGCCTGAGTTGCTTCC back to topCoding sequence (CDS) from alignment at CM002471.1:361261..362931+ >rna7338 ID=rna7338|Name=rna7338|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002471.1:361261..362931+ (Nannochloropsis gaditana)
ATGGTAAGCGATCTCATCCACGCTATCTTGGACTCTATAAAAAGTGCTTA
TGTGCACCATCGCATCATAGATCATGTAAAACAATTCTTTTGCGTCCGGG
CACAggatcgaggaggggagtggcGGTTCCAGACAAAACGACAGGTCTGG
ATTTTAAAGCACTTGTACTCGCAAAATGTCATCGACAAAACGTTTTTCAA
AAAACTAGTGTTGCCATACATAAGTACCTTGCACGGTGGCGCCAAAGAGC
GTGTTCTTACAGAGGCACAAGGGTATTTGCAGAGGGAGGCTGGACCTGTG
AGATCTGATCTtgaaagcgaggaagacaaggaggggaggggcgagggcgg
ggagaaaggaagtgaCCGTCGTGACTCACGGGGGATGACTGAGGTTGGCG
AGAGCACCAACCGAGTCAGGAGGAAACGCGCGAAAAAAATAGTTGCGGCA
TTGGCAGATGCAGAAGGTGCCAAAGACGAGGAAAGCACAAAGTAAATGGT
AAGCGATCTCATCCACGCTATCTTGGACTCTATAAAAAGTGCTTATGTGC
ACCATCGCATCATAGATCATGTAAAACAATTCTTTTGCGTCCGGGCACAg
gatcgaggaggggagtggcGGTTCCAGACAAAACGACAGGTCTGGATTTT
AAAGCACTTGTACTCGCAAAATGTCATCGACAAAACGTTTTTCAAAAAAC
TAGTGTTGCCATACATAAGTACCTTGCACGGTGGCGCCAAAGAGCGTGTT
CTTACAGAGGCACAAGGGTATTTGCAGAGGGAGGCTGGACCTGTGAGATC
TGATCTtgaaagcgaggaagacaaggaggggaggggcgagggcggggaga
aaggaagtgaCCGTCGTGACTCACGGGGGATGACTGAGGTTGGCGAGAGC
ACCAACCGAGTCAGGAGGAAACGCGCGAAAAAAATAGTTGCGGCATTGGC
AGATGCAGAAGGTGCCAAAGACGAGGAAAGCACAAAGTAA back to top
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