EWM23371.1, cds7321 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|585104379|gb|EWM23371.1| (Protein of unknown function DUF2373 [Nannochloropsis gaditana]) HSP 1 Score: 335.495 bits (859), Expect = 1.371e-116 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 1 MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164
MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK
Sbjct: 1 MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|553194527|ref|XP_005855979.1| (hypothetical protein NGA_0524400 [Nannochloropsis gaditana CCMP526] >gi|422293087|gb|EKU20388.1| hypothetical protein NGA_0524400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 266.159 bits (679), Expect = 7.245e-89 Identity = 130/152 (85.53%), Postives = 136/152 (89.47%), Query Frame = 0
Query: 13 IKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164
+ +A + K+ +DRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDS+GMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK
Sbjct: 29 LAAARAANTTPKRTKKSISSEEEDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSQGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 180
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|359381523|emb|CCE81982.1| (Piso0_002670 [Millerozyma farinosa CBS 7064]) HSP 1 Score: 58.5362 bits (140), Expect = 3.921e-7 Identity = 44/158 (27.85%), Postives = 80/158 (50.63%), Query Frame = 0
Query: 23 IDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGM------TEVGESTNRVRRKRAKKIVAALADA----------EGAKDEESTK 164
+++++Q+ RA W+F ++Q WI+K+L +N+ DK ++ +L Y+ + GG+++RV+ Q + R V +E++ D+E E+ +D+ D+ G TE ES NR KR I+ L + E +K EE++K
Sbjct: 78 LNYLRQYTEDRAN-----WKFSKQKQNWIIKNL--ENIEDK--YEGALLAYLEGMQGGSRDRVIESCQNTISRWNDLVEK-IEAKLDQESDQSNNEESNDKADTDGQDKDKASTETQESVNRDHVKRCITILKVLTETTPSVKGFESEEDSKPEENSK 225
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|1207967716|ref|XP_021374463.1| (uncharacterized protein C7orf50 homolog [Mizuhopecten yessoensis]) HSP 1 Score: 57.7658 bits (138), Expect = 6.148e-7 Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 0
Query: 41 WRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGG 117
W+FQ RQVW+L+HLY ++ + T F +L+L Y+ L G AKE L +A + EA SD EG EGG
Sbjct: 229 WKFQKVRQVWLLQHLYDESKVPNTDFDRLLL-YLENLKGKAKEETLLKASKVI--EAEDSSSD-------EGNNEGG 295
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|673015644|ref|XP_008861783.1| (hypothetical protein H310_00691 [Aphanomyces invadans] >gi|574483381|gb|ETW10372.1| hypothetical protein H310_00691 [Aphanomyces invadans]) HSP 1 Score: 56.225 bits (134), Expect = 7.567e-7 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0
Query: 40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQ 90
EWRF+ +QVWIL+ +Y +V++K F +VL Y+ + G A+ERVL +AQ
Sbjct: 89 EWRFKKAKQVWILRWMYRADVVNKALF-TIVLEYLEGMQGTARERVLRDAQ 138
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|676436897|ref|XP_009048030.1| (hypothetical protein LOTGIDRAFT_230679 [Lottia gigantea] >gi|556112744|gb|ESP01396.1| hypothetical protein LOTGIDRAFT_230679 [Lottia gigantea]) HSP 1 Score: 56.6102 bits (135), Expect = 7.736e-7 Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0
Query: 40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALA 152
EW+FQ RQ+ +L+H+Y Q I +FK+L L Y+ L G +KE+ + EA L E D EG E +K S++ D ++RR+RA +I+ L+
Sbjct: 111 EWKFQKVRQMCLLQHMYDQTQISDKYFKRL-LAYLEGLTGASKEKTIKEAGQIL------------VENDSEGESEDKDKESEKTDV-----------QIRRERATQILRILS 199
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|552934861|gb|ESA18178.1| (hypothetical protein GLOINDRAFT_20980, partial [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 56.225 bits (134), Expect = 7.977e-7 Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSD--LESEEDKEGRGE 115
+W+FQ RQ+W+LK+ YS++++ + FF +L L YI+ L G +++R L AQ + R + D + ++D E R E
Sbjct: 76 QWKFQKIRQIWLLKNAYSEDLLSEDFF-ELFLDYIAELLGQSRDRTLEMAQDMINRLESEQKDDETTDQKDDNEKRKE 152 The following BLAST results are available for this feature:
BLAST of EWM23371.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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