EWM23371.1, cds7321 (CDS) Nannochloropsis gaditana

Overview
NameEWM23371.1
Unique Namecds7321
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:362149..362397 +
Alignment locationCM002471.1:362535..362780 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23371.1
ProductProtein of unknown function DUF2373
Orig transcript idgnl|cribi|Naga_100057g12.3930.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:362149..362397 +
CM002471.1supercontigCM002471.1:362535..362780 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR019327DUF2373
Homology
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|585104379|gb|EWM23371.1| (Protein of unknown function DUF2373 [Nannochloropsis gaditana])

HSP 1 Score: 335.495 bits (859), Expect = 1.371e-116
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164
            MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK
Sbjct:    1 MVSDLIHAILDSIKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|553194527|ref|XP_005855979.1| (hypothetical protein NGA_0524400 [Nannochloropsis gaditana CCMP526] >gi|422293087|gb|EKU20388.1| hypothetical protein NGA_0524400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 266.159 bits (679), Expect = 7.245e-89
Identity = 130/152 (85.53%), Postives = 136/152 (89.47%), Query Frame = 0
Query:   13 IKSAYVHHRIIDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 164
            + +A   +      K+      +DRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDS+GMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK
Sbjct:   29 LAAARAANTTPKRTKKSISSEEEDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSQGMTEVGESTNRVRRKRAKKIVAALADAEGAKDEESTK 180          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|359381523|emb|CCE81982.1| (Piso0_002670 [Millerozyma farinosa CBS 7064])

HSP 1 Score: 58.5362 bits (140), Expect = 3.921e-7
Identity = 44/158 (27.85%), Postives = 80/158 (50.63%), Query Frame = 0
Query:   23 IDHVKQFFCVRAQDRGGEWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGM------TEVGESTNRVRRKRAKKIVAALADA----------EGAKDEESTK 164
            +++++Q+   RA      W+F  ++Q WI+K+L  +N+ DK  ++  +L Y+  + GG+++RV+   Q  + R    V   +E++ D+E      E+ +D+ D+ G       TE  ES NR   KR   I+  L +           E +K EE++K
Sbjct:   78 LNYLRQYTEDRAN-----WKFSKQKQNWIIKNL--ENIEDK--YEGALLAYLEGMQGGSRDRVIESCQNTISRWNDLVEK-IEAKLDQESDQSNNEESNDKADTDGQDKDKASTETQESVNRDHVKRCITILKVLTETTPSVKGFESEEDSKPEENSK 225          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|1207967716|ref|XP_021374463.1| (uncharacterized protein C7orf50 homolog [Mizuhopecten yessoensis])

HSP 1 Score: 57.7658 bits (138), Expect = 6.148e-7
Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 0
Query:   41 WRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGG 117
            W+FQ  RQVW+L+HLY ++ +  T F +L+L Y+  L G AKE  L +A   +  EA    SD       EG  EGG
Sbjct:  229 WKFQKVRQVWLLQHLYDESKVPNTDFDRLLL-YLENLKGKAKEETLLKASKVI--EAEDSSSD-------EGNNEGG 295          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|673015644|ref|XP_008861783.1| (hypothetical protein H310_00691 [Aphanomyces invadans] >gi|574483381|gb|ETW10372.1| hypothetical protein H310_00691 [Aphanomyces invadans])

HSP 1 Score: 56.225 bits (134), Expect = 7.567e-7
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQ 90
            EWRF+  +QVWIL+ +Y  +V++K  F  +VL Y+  + G A+ERVL +AQ
Sbjct:   89 EWRFKKAKQVWILRWMYRADVVNKALF-TIVLEYLEGMQGTARERVLRDAQ 138          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|676436897|ref|XP_009048030.1| (hypothetical protein LOTGIDRAFT_230679 [Lottia gigantea] >gi|556112744|gb|ESP01396.1| hypothetical protein LOTGIDRAFT_230679 [Lottia gigantea])

HSP 1 Score: 56.6102 bits (135), Expect = 7.736e-7
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSDLESEEDKEGRGEGGEKGSDRRDSRGMTEVGESTNRVRRKRAKKIVAALA 152
            EW+FQ  RQ+ +L+H+Y Q  I   +FK+L L Y+  L G +KE+ + EA   L             E D EG  E  +K S++ D            ++RR+RA +I+  L+
Sbjct:  111 EWKFQKVRQMCLLQHMYDQTQISDKYFKRL-LAYLEGLTGASKEKTIKEAGQIL------------VENDSEGESEDKDKESEKTDV-----------QIRRERATQILRILS 199          
BLAST of EWM23371.1 vs. NCBI_GenBank
Match: gi|552934861|gb|ESA18178.1| (hypothetical protein GLOINDRAFT_20980, partial [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 56.225 bits (134), Expect = 7.977e-7
Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   40 EWRFQTKRQVWILKHLYSQNVIDKTFFKKLVLPYISTLHGGAKERVLTEAQGYLQREAGPVRSD--LESEEDKEGRGE 115
            +W+FQ  RQ+W+LK+ YS++++ + FF +L L YI+ L G +++R L  AQ  + R     + D   + ++D E R E
Sbjct:   76 QWKFQKIRQIWLLKNAYSEDLLSEDFF-ELFLDYIAELLGQSRDRTLEMAQDMINRLESEQKDDETTDQKDDNEKRKE 152          
The following BLAST results are available for this feature:
BLAST of EWM23371.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585104379|gb|EWM23371.1|1.371e-116100.00Protein of unknown function DUF2373 [Nannochlorops... [more]
gi|553194527|ref|XP_005855979.1|7.245e-8985.53hypothetical protein NGA_0524400 [Nannochloropsis ... [more]
gi|359381523|emb|CCE81982.1|3.921e-727.85Piso0_002670 [Millerozyma farinosa CBS 7064][more]
gi|1207967716|ref|XP_021374463.1|6.148e-741.56uncharacterized protein C7orf50 homolog [Mizuhopec... [more]
gi|673015644|ref|XP_008861783.1|7.567e-747.06hypothetical protein H310_00691 [Aphanomyces invad... [more]
gi|676436897|ref|XP_009048030.1|7.736e-732.74hypothetical protein LOTGIDRAFT_230679 [Lottia gig... [more]
gi|552934861|gb|ESA18178.1|7.977e-735.90hypothetical protein GLOINDRAFT_20980, partial [Rh... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7338rna7338Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications