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Properties
| Property Name | Value |
|---|
| Product | single-stranded dna-binding protein |
| Orig transcript id | gnl|cribi|Naga_100057g16.3932.mrna |
| Orig protein id | gnl|cribi|Naga_100057g16.3932 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:351565..353112 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7334 ID=rna7334|Name=rna7334|organism=Nannochloropsis gaditana|type=mRNA|length=2824bp
ACGCAAGATGCAAGATGAAATCCCAAATCGTTTACTACATGAGCTCGATG
CGACAGAAATCCATGCATATTTAGGGTAGAGCTCTTTGTTAGGACGTATC
GTAACGTCCTCCTGTGTTCAACCTGTCCATCGCCATCAACCCTGCCTTTT
AATGGCTAATCCTTTTTCCTAATACGTCCACACAGGCAAAATTGGATTTA
TCTTTTATAAAAGCAGCCTTAGGCTCGTCTTCTAGATCCTTTGTTACCTC
TGTTTGAGCCCCTTTGCTCCATCATCCGACCTCGCAGCAGCTCGGCTCGA
CTTGGTCATGTGTGGGATCTTGGCCATCTTCCGCTCCTCCCTCTCGGAGG
CTGATCTCCGGAAGATTATGATTCAGAATGCGCTCAAACTGCGACACAGA
GGCCCCGACTGGAGCGGCTACAAGGTCTACGGGAGCAACGCCATCGCGCA
CGAACGTCTCGCCATCATCGATCCCGACTCAGGCTCTCAGCCTTTGGTCA
GCCCGGACGGCAACATCATCGTGGCCGCCAATGGTGAGATCTACAATTAC
AAGGAGCTCTACGAGGAGCTAGGCGGCATCGACTTCTACCCGCCCAAGAC
AGGCTCCGATTGCGAGGTCATCATCCCCCTCTATTTGAAGCACGGGCGCG
ATTTCCCTCGCTTCCTTCGCGGTATGTTCTCTTTCGTCCTGTACGACCGC
CGGGACGACTCCTTCTTCGTCCTCCGCGACCACATGGGCATCACGCCCCT
GTACGCAGGCTACGGGGCGGACGGTTCCATCTGGTTCGCGAGTGAAATGA
AGGCGCTCACCGACGTGGTCGCGCGCGTGGATGTCTTTCCCCCCGGCCAC
GCCTACGACAGCGAGCTTGAGGGGAAGGGGGGCTTCGTCCAGTGGTACAA
CCCCGTCTGGTACGACTCCACCTACCTCCCGACGGAGCGAGTGGAGCTCC
TGAATATCCGCAACGCATTCGAGATGGCCGTGAAACGCCGGATGATGTCG
GACGTGCCCTGGGGGGTGCTCCTCTCGGGGGGCCTGGACTCCTCCCTTGT
CGCCTCCATCGCCTCCCGCCTCTCCCGCCGAGACCCGAACAACGAGTGGC
CCCGCCTGCACTCCTTCTCCATTGGGCTCGAGAACTCCCCGGACCTGGCC
GCGGCCGCGGAGGTGGCCAAGTTCGTGGGGACCGTTCACCACTCCTACGT
GTTCACCGTGCAGGAGGGCATGGACGCGGTGCGGGAGGTGATCTACCACC
TGGAGACTTACGACGTGACCACTGTCCGGGCCGCCACGCCCATGTTCCTG
ATGAGCCGGAAGATCAAGGCCCGGGGCGTGAAGATGGTGCTCTCGGGGGA
GGGCGCGGACGAGATCTTCGGGGGGTACCTGTACTTCCACAAGGCGCCAG
ACAGCAAGGAATTCCACGCCGAGACTGTGGACAAGCTGCGAGGGCTCTTC
CAGTACGACTGCCTCCGAGCCAACAAGGCCACCTCGGCCTGGGGCGTGGA
GGTGCGCGTCCCTTTCTTGGACCAGGACTTTCTGGACGTGGCCATGACCA
TCAACCCAGAGGATAAGATGATCGTCAAAGACGGAGAGGGGCGGCGGATG
GAGAAATGGATCCTGCGGAAAGCCTTCGATGATCCCGCCGACCCCTATTT
GCCCGCCAAGATCTTGTGGCGACAGAAGGAGCAGTTCAGCGACGGGGTGG
GCTACGGTTGGATCGACGCCTTGCGCGACCACGCAAATGCCGACGTCTCG
GACAAGGTGTTCAGCGCCGCCGAGAACCGGTTCCCCTACAACACGCCGCT
CACCAAGGAGGCCTACTACTACCGCGACATCTTCGACCGCTTCTTCCCCT
CCCCCTCCGCCGCGGCCACAGTCCCAGGCGGGCCCTCGATCGCGTGCTCG
ACGCCCAGGGCCATGGAGTGGGACGCCTCCTTCAGGGGACGCGCGGACCC
CAGCGGGCGAGCCGTGGCCGCTGTGCACGAGAGTGCCTACGTGGAGGGGT
TCACGCCGCAGGCGGAGGGAGAGGGGGGCCGGGGGGCTAAGAGAAAAGTA
GACGGGGAGCCGGTGCAGAACGGGAAGGACAAGTAGGAGGTTGAGGAGGG
AATGAAGGGGGCGAGAGAGGGAGGGAAGGAGGGTAGTAGGGAGGAAGGGA
TGACTGTGTTCCAAGCGGGGCAGGAGAAGGGGGGGAGAGGCGGGAGGAGA
GTCGGTTGACCGGCGCTCCTTCTAATGGAATGGGTGCAAATGAAAAGAAC
GTGAGGCGTGACTTCTGGCGGCGGTGGGGGGAGGGGGGAGGAGGGGGTTC
GGGCAGGGTGGTGGGGCAGGATAGCCGCCACACGCCGAGGCTGCCGACAG
GTCTTGGGGGTGAGAGGCTCATGGTGAGGCGGACGAGTGGAGCAGGAGGT
GGACTGGGGTGGACTGGGGTGGATCTTGCAAGGGCGGTGTGTTGCCTCAG
GAGTGACGTGGCGAGGGGGCATTAAAGGGGTCGCGGTGGGACACGGTGGG
GTGCCACAGAACTGATAAAGCGATACGGGGGCGCAAGTACAGGCCCGATC
GACTTTGCTTTTTGTGTGCTTACATCTCAGGAAATCTCAAAATTTCGTCT
TCTCCTGCTTTTCCTAGCCTCTTCAGCATTGTCAGTCCCCACGGGCGGGG
GGCGTGCGGCAGATATTTGATTGGGTGACTGTACATCCTGACGCTTAGAC
TTGTTCGTCCAAAAATAACCAGCCTCCGTCCTCGCCTCTCAAAAATTTGC
TCCGTTCGCTCATCCACACGTGTCTTTTCACCCTAAAAGTTATGAAAGCC
TCCTCTTCCGTCGCCCCGGCCTCC back to topprotein sequence of rna7334 >rna7334-protein ID=rna7334-protein|Name=rna7334|organism=Nannochloropsis gaditana|type=polypeptide|length=330bp
MSLNLHQPEAGFQQDQRSHGTTTFIWQQPELINVCVLKVLLFTRLGGEQN
LSISIMVSAYTVFSHHCPCFPRLHPAQPIQPMPLARCPPGPKRRDALSSL
RPQEMDMDAGGPGAGSDLSILNQVMLVGRLGSEPAVKYLESGNCVLSISM
AVNRETSPGRQNMEAVPKAPEVDWIRLEAWGRTAEGMAANARKGSRVWVV
GRLVTNSWVDRYGQNRNELKVRIRRIEVLQSGRSQTQPPMGGEYYQQGGG
WDGKGAGSREEQSSMVMPDYLASGMDGGQEQSPYSRNGAGAPSPVASPFT
KKGSYGHGGGTGGGGQFEVDEYEADTDIPF back to topmRNA from alignment at CM002471.1:351565..353112+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7334 ID=rna7334|Name=rna7334|organism=Nannochloropsis gaditana|type=mRNA|length=1548bp|location=Sequence derived from alignment at CM002471.1:351565..353112+ (Nannochloropsis gaditana)
ATGTCCTTAAATTTGGTTTGGCTATTGTTCACGTCCAGCTCTTGACTCGG
ATCTTCTTGCACGTGCTTGTCTTTCATGGTGATTTGTCCTGTATGGTATC
GCTCTTTCCGTTTGACAAAGTTTTGACGACGCCCACGCGTCCTTACAGCA
TCAGCCCGAGGCCGGCTTCCAACAAGATCAACGGAGTCACGGGACAACAA
CCTTTATCTGGCAGCAGCCAGAATTAATAAATGTGTGCGTACTCAaagtc
ctcctcttcacacGGCTTGGAGGGGAACAAAACCTGTCTATCAGCATCAT
GGTCAGCGCGTATACTGTTTTTAGGTAAGCATTTGATCAAACATGTAATC
GAGTGTTTTGCCGTACTTTGTTGGCAGAGAAGATATTCAATTGCTAAACT
GAAACGGGATATGGAAAGGTTATGAGAGTGGCATTTGAAGAATAGTTGAC
TGGTTTGACAAGCGTCATTGGTGCCTAAATGGAATGGATGTAAGAGATTG
GGGGAAAATACTGCGGAATGGAACGGCGggggagcaagcggagcATGTAA
ACCGGAGAGTGGTTTCAAAATGTCATCCGGCTTTCGTGAAACCCTAGTCT
TGAAATTGTTCCGGAAAGGCGGGTTCGAGAGGCAAGCGCTGTTATCCTTC
CTACGCTTGCCTATGAAATCTTCCCGtacctctttccccttcgacAGCCA
CCACTGTCCTTGCTTCCCACGCCTTCATCCAGCCCAGCCCATTCAGCCCA
TGCCCCTGTACCCTTTCCActgcctcgtccctccctgggACTACTGTGGC
CCCCAGTGCCCGttgcccccccggccccaagCGAAGAGACGCCCTGAGCA
GCCTGCGGCCTCAGGAAATGGACATGGACGCAGGCGGTCCAGGCGCAGGG
AGCGACTTATCCATTTTAAATCAAGTGATGTTGGTGGGACGCTTAGGTAG
CGAGCCAGCGGTGAAGTACCTGGAGAGTGGAAATTGCGTTCTCTCCATCT
CGATGGCCGTCAACCGGGAGACAAGCCCAGGACGGCAGAACATGGAAGCC
GTGCCAAAGGCGCCGGAGGTGGATTGGATTCGATTGGAAGcctggggaag
gacggcagAGGGCATGGCCGCGAATGCAAGGAAGGGCTCCAGGGTGTGGG
TGGTCGGGAGATTGGTGACGAACAGCTGGGTGGACAGGTACGGCCAGAAC
AGGAATGAACTGAAAGTGCGCATCAGGCGGATAGAGGTCCTCCAATCAGG
CAGGAGCCAGACACAGCCTCCCATGGGGGGCGAGTACTATCAGCAGGGGG
GTGGAtgggacggaaagggagcaggaagccGCGAGGAGCAGTCTTCCATG
GTGATGCCAGATTATCTTGCAAGCGGAATGGATGGTGGACAGGAGCAATC
TCCATATTCTCGAAATGGTGCCGGCGCACCTTCTCCAGTGGCGTCACCGT
TTACGAAGAAGGGGTCTtacgggcatggaggaggaaccggaggagggggg
caattTGAAGTGGACGAGTATGAGGCAGATACAGACATCCCTTTCTAG back to topCoding sequence (CDS) from alignment at CM002471.1:351565..353112+ >rna7334 ID=rna7334|Name=rna7334|organism=Nannochloropsis gaditana|type=CDS|length=3972bp|location=Sequence derived from alignment at CM002471.1:351565..353112+ (Nannochloropsis gaditana)
ATGTCCTTAAATTTGCATCAGCCCGAGGCCGGCTTCCAACAAGATCAACG
GAGTCACGGGACAACAACCTTTATCTGGCAGCAGCCAGAATTAATAAATG
TGTGCGTACTCAaagtcctcctcttcacacGGCTTGGAGGGGAACAAAAC
CTGTCTATCAGCATCATGGTCAGCGCGTATACTGTTTTTAGCCACCACTG
TCCTTGCTTCCCACGCCTTCATCCAGCCCAGCCCATTCAGCCCATGCCCC
TTGCCCGttgcccccccggccccaagCGAAGAGACGCCCTGAGCAGCCTG
CGGCCTCAGGAAATGGACATGGACGCAGGCGGTCCAGGCGCAGGGAGCGA
CTTATCCATTTTAAATCAAGTGATGTTGGTGGGACGCTTAGGTAGCGAGC
CAGCGGTGAAGTACCTGGAGAGTGGAAATTGCGTTCTCTCCATCTCGATG
GCCGTCAACCGGGAGACAAGCCCAGGACGGCAGAACATGGAAGCCGTGCC
AAAGGCGCCGGAGGTGGATTGGATTCGATTGGAAGcctggggaaggacgg
cagAGGGCATGGCCGCGAATGCAAGGAAGGGCTCCAGGGTGTGGGTGGTC
GGGAGATTGGTGACGAACAGCTGGGTGGACAGGTACGGCCAGAACAGGAA
TGAACTGAAAGTGCGCATCAGGCGGATAGAGGTCCTCCAATCAGGCAGGA
GCCAGACACAGCCTCCCATGGGGGGCGAGTACTATCAGCAGGGGGGTGGA
tgggacggaaagggagcaggaagccGCGAGGAGCAGTCTTCCATGGTGAT
GCCAGATTATCTTGCAAGCGGAATGGATGGTGGACAGGAGCAATCTCCAT
ATTCTCGAAATGGTGCCGGCGCACCTTCTCCAGTGGCGTCACCGTTTACG
AAGAAGGGGTCTtacgggcatggaggaggaaccggaggaggggggcaatt
TGAAGTGGACGAGTATGAGGCAGATACAGACATCCCTTTCTAGATGTCCT
TAAATTTGCATCAGCCCGAGGCCGGCTTCCAACAAGATCAACGGAGTCAC
GGGACAACAACCTTTATCTGGCAGCAGCCAGAATTAATAAATGTGTGCGT
ACTCAaagtcctcctcttcacacGGCTTGGAGGGGAACAAAACCTGTCTA
TCAGCATCATGGTCAGCGCGTATACTGTTTTTAGCCACCACTGTCCTTGC
TTCCCACGCCTTCATCCAGCCCAGCCCATTCAGCCCATGCCCCTTGCCCG
ttgcccccccggccccaagCGAAGAGACGCCCTGAGCAGCCTGCGGCCTC
AGGAAATGGACATGGACGCAGGCGGTCCAGGCGCAGGGAGCGACTTATCC
ATTTTAAATCAAGTGATGTTGGTGGGACGCTTAGGTAGCGAGCCAGCGGT
GAAGTACCTGGAGAGTGGAAATTGCGTTCTCTCCATCTCGATGGCCGTCA
ACCGGGAGACAAGCCCAGGACGGCAGAACATGGAAGCCGTGCCAAAGGCG
CCGGAGGTGGATTGGATTCGATTGGAAGcctggggaaggacggcagAGGG
CATGGCCGCGAATGCAAGGAAGGGCTCCAGGGTGTGGGTGGTCGGGAGAT
TGGTGACGAACAGCTGGGTGGACAGGTACGGCCAGAACAGGAATGAACTG
AAAGTGCGCATCAGGCGGATAGAGGTCCTCCAATCAGGCAGGAGCCAGAC
ACAGCCTCCCATGGGGGGCGAGTACTATCAGCAGGGGGGTGGAtgggacg
gaaagggagcaggaagccGCGAGGAGCAGTCTTCCATGGTGATGCCAGAT
TATCTTGCAAGCGGAATGGATGGTGGACAGGAGCAATCTCCATATTCTCG
AAATGGTGCCGGCGCACCTTCTCCAGTGGCGTCACCGTTTACGAAGAAGG
GGTCTtacgggcatggaggaggaaccggaggaggggggcaattTGAAGTG
GACGAGTATGAGGCAGATACAGACATCCCTTTCTAGATGTCCTTAAATTT
GCATCAGCCCGAGGCCGGCTTCCAACAAGATCAACGGAGTCACGGGACAA
CAACCTTTATCTGGCAGCAGCCAGAATTAATAAATGTGTGCGTACTCAaa
gtcctcctcttcacacGGCTTGGAGGGGAACAAAACCTGTCTATCAGCAT
CATGGTCAGCGCGTATACTGTTTTTAGCCACCACTGTCCTTGCTTCCCAC
GCCTTCATCCAGCCCAGCCCATTCAGCCCATGCCCCTTGCCCGttgcccc
cccggccccaagCGAAGAGACGCCCTGAGCAGCCTGCGGCCTCAGGAAAT
GGACATGGACGCAGGCGGTCCAGGCGCAGGGAGCGACTTATCCATTTTAA
ATCAAGTGATGTTGGTGGGACGCTTAGGTAGCGAGCCAGCGGTGAAGTAC
CTGGAGAGTGGAAATTGCGTTCTCTCCATCTCGATGGCCGTCAACCGGGA
GACAAGCCCAGGACGGCAGAACATGGAAGCCGTGCCAAAGGCGCCGGAGG
TGGATTGGATTCGATTGGAAGcctggggaaggacggcagAGGGCATGGCC
GCGAATGCAAGGAAGGGCTCCAGGGTGTGGGTGGTCGGGAGATTGGTGAC
GAACAGCTGGGTGGACAGGTACGGCCAGAACAGGAATGAACTGAAAGTGC
GCATCAGGCGGATAGAGGTCCTCCAATCAGGCAGGAGCCAGACACAGCCT
CCCATGGGGGGCGAGTACTATCAGCAGGGGGGTGGAtgggacggaaaggg
agcaggaagccGCGAGGAGCAGTCTTCCATGGTGATGCCAGATTATCTTG
CAAGCGGAATGGATGGTGGACAGGAGCAATCTCCATATTCTCGAAATGGT
GCCGGCGCACCTTCTCCAGTGGCGTCACCGTTTACGAAGAAGGGGTCTta
cgggcatggaggaggaaccggaggaggggggcaattTGAAGTGGACGAGT
ATGAGGCAGATACAGACATCCCTTTCTAGATGTCCTTAAATTTGCATCAG
CCCGAGGCCGGCTTCCAACAAGATCAACGGAGTCACGGGACAACAACCTT
TATCTGGCAGCAGCCAGAATTAATAAATGTGTGCGTACTCAaagtcctcc
tcttcacacGGCTTGGAGGGGAACAAAACCTGTCTATCAGCATCATGGTC
AGCGCGTATACTGTTTTTAGCCACCACTGTCCTTGCTTCCCACGCCTTCA
TCCAGCCCAGCCCATTCAGCCCATGCCCCTTGCCCGttgcccccccggcc
ccaagCGAAGAGACGCCCTGAGCAGCCTGCGGCCTCAGGAAATGGACATG
GACGCAGGCGGTCCAGGCGCAGGGAGCGACTTATCCATTTTAAATCAAGT
GATGTTGGTGGGACGCTTAGGTAGCGAGCCAGCGGTGAAGTACCTGGAGA
GTGGAAATTGCGTTCTCTCCATCTCGATGGCCGTCAACCGGGAGACAAGC
CCAGGACGGCAGAACATGGAAGCCGTGCCAAAGGCGCCGGAGGTGGATTG
GATTCGATTGGAAGcctggggaaggacggcagAGGGCATGGCCGCGAATG
CAAGGAAGGGCTCCAGGGTGTGGGTGGTCGGGAGATTGGTGACGAACAGC
TGGGTGGACAGGTACGGCCAGAACAGGAATGAACTGAAAGTGCGCATCAG
GCGGATAGAGGTCCTCCAATCAGGCAGGAGCCAGACACAGCCTCCCATGG
GGGGCGAGTACTATCAGCAGGGGGGTGGAtgggacggaaagggagcagga
agccGCGAGGAGCAGTCTTCCATGGTGATGCCAGATTATCTTGCAAGCGG
AATGGATGGTGGACAGGAGCAATCTCCATATTCTCGAAATGGTGCCGGCG
CACCTTCTCCAGTGGCGTCACCGTTTACGAAGAAGGGGTCTtacgggcat
ggaggaggaaccggaggaggggggcaattTGAAGTGGACGAGTATGAGGC
AGATACAGACATCCCTTTCTAG back to top
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