rna7330, rna7330 (mRNA) Nannochloropsis gaditana

Overview
Namerna7330
Unique Namerna7330
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length701
Alignment locationCM002471.1:343190..343519 -

Link to JBrowse

Properties
Property NameValue
Productdynamin switch motor protein
Orig transcript idgnl|cribi|Naga_100057g20.3920.mrna
Orig protein idgnl|cribi|Naga_100057g20.3920
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:343190..343519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100057g20gene7094Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23361.1cds7313Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7330rna7330-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7330 ID=rna7330|Name=rna7330|organism=Nannochloropsis gaditana|type=mRNA|length=701bp
CTTTATCTCTCCCCTTGCATTACAGGAAGCATTCCATGTGCCGCAGCGGT
TTGTGGTTTATTGCGCTGGCCTTTCTGGCTTCTATTGCCACGTCTACAGC
CTTCCTGGTACCTTTTCCGGAAAGACCTTTGCCATGCACACGATGCCACG
CTACTGCCATTTCAACATCGGGCCAGGTCAATCGGTGCAGTGTCTTAAGA
TTCTGGACACAAGCAGCAGTGCTTCCTGCTCTCGTGCTTTTATCTCCCGA
CCTAAGGAGTGAAGGGCGAGCCCTCGCCCAAGCCGCCTCCCCCGTCGAGG
AGGCCCTCACCCGCGTCTTGATTGTCCGAGACTCAACGGAGCAGCTGGAG
GAGGAGCTTACCAGCGGAGACACTTATCCAGACGTCAAAGCTCTGGTCAA
CTCCCTTATCAGGAACTACAAATTGAAAAGCAGCATGGAAAGTGCACTTG
CCCTCCTGCCCTCTGGCTCGACAGAGGAGGGTCGGAAATTCGCCAAGTCT
GCCTACGAAAATCTGACCATTATCCTCGAATACTTCCCCGAGGACGTTGC
AGGGCCCACAGCAAACAAGACACTCAAGCCCGACCAGCTGTCTTTCACCA
TTAAGGCCCTGCAGGCGACGCGGAAGGAGCTAGATTCTCTGCTTGGGTTG
TTCCCGACAGAGCTCCGGGGGCGACTCGCGGAAAACGTCGCCAACACGTG
A
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protein sequence of rna7330

>rna7330-protein ID=rna7330-protein|Name=rna7330|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAK
DNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNE
VRDFNTFKL
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mRNA from alignment at CM002471.1:343190..343519-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7330 ID=rna7330|Name=rna7330|organism=Nannochloropsis gaditana|type=mRNA|length=330bp|location=Sequence derived from alignment at CM002471.1:343190..343519- (Nannochloropsis gaditana)
ATGCGGTACGGGGACGGCCCGAACGACCGGGAGAAGATCGAGACGGAGAT
CATTAAGGCGTTGACCGCGAGCTATTTCGACGTGGTGCGGAAGAACTTCA
TGGACATGGTGCCCAAGACTATAATGTACTTCCTGGTCAACCACGCCAAG
GACAACCTGCAGAACGAGCTGGTCTCCAACCTGTACCGAGACGACCTGAT
CGGGGAGAGCATGCGGGAGACGGCGGACGTGGCGATGCGGCGGAAGAACG
CTCAAGAGATGAAGCTCTTATTGCAAAAGGCACTGGAGATTGTGAATGAG
GTGCGGGATTTCAACACCTTCAAACTCTAA
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Coding sequence (CDS) from alignment at CM002471.1:343190..343519-

>rna7330 ID=rna7330|Name=rna7330|organism=Nannochloropsis gaditana|type=CDS|length=330bp|location=Sequence derived from alignment at CM002471.1:343190..343519- (Nannochloropsis gaditana)
ATGCGGTACGGGGACGGCCCGAACGACCGGGAGAAGATCGAGACGGAGAT
CATTAAGGCGTTGACCGCGAGCTATTTCGACGTGGTGCGGAAGAACTTCA
TGGACATGGTGCCCAAGACTATAATGTACTTCCTGGTCAACCACGCCAAG
GACAACCTGCAGAACGAGCTGGTCTCCAACCTGTACCGAGACGACCTGAT
CGGGGAGAGCATGCGGGAGACGGCGGACGTGGCGATGCGGCGGAAGAACG
CTCAAGAGATGAAGCTCTTATTGCAAAAGGCACTGGAGATTGTGAATGAG
GTGCGGGATTTCAACACCTTCAAACTCTAA
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Synonyms
Publications