EWM23361.1, cds7313 (CDS) Nannochloropsis gaditana

Overview
NameEWM23361.1
Unique Namecds7313
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:343190..343519 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23361.1
Productdynamin switch motor protein
Orig transcript idgnl|cribi|Naga_100057g20.3920.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:343190..343519 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR020850GTPase_effector_domain_GED
IPR022812Dynamin_SF
IPR003130GED
Homology
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|585104369|gb|EWM23361.1| (dynamin switch motor protein [Nannochloropsis gaditana])

HSP 1 Score: 223.016 bits (567), Expect = 8.253e-74
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFKL 109
            MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFKL
Sbjct:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFKL 109          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|695469612|ref|XP_009540182.1| (hypothetical protein PHYSODRAFT_566888 [Phytophthora sojae] >gi|348664514|gb|EGZ04375.1| hypothetical protein PHYSODRAFT_566888 [Phytophthora sojae])

HSP 1 Score: 164.466 bits (415), Expect = 2.003e-47
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  267 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLSELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 374          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|698793350|ref|XP_009829707.1| (hypothetical protein H257_06247 [Aphanomyces astaci] >gi|574115274|gb|ETV80760.1| hypothetical protein H257_06247 [Aphanomyces astaci])

HSP 1 Score: 165.622 bits (418), Expect = 8.444e-46
Identity = 74/108 (68.52%), Postives = 92/108 (85.19%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK+IM F+VNHAKD +QN+LVS LY+++ +GE +RE+ D+A RR N  EM+ LL KAL+IVNEVRDFNTFK
Sbjct:  579 MRQGDAPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKSIMCFMVNHAKDQVQNQLVSTLYKEEKLGELLRESGDIASRRANCSEMRTLLSKALDIVNEVRDFNTFK 686          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|695428195|ref|XP_009529892.1| (hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae] >gi|348676325|gb|EGZ16143.1| hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae])

HSP 1 Score: 164.851 bits (416), Expect = 2.022e-45
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  601 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLSELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 708          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|675203071|ref|XP_008910420.1| (hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >gi|566016819|gb|ETI39730.1| hypothetical protein F443_14709 [Phytophthora parasitica P1569] >gi|567954207|gb|ETK79845.1| hypothetical protein L915_14329 [Phytophthora parasitica] >gi|567982861|gb|ETL33264.1| hypothetical protein L916_14234 [Phytophthora parasitica] >gi|568012373|gb|ETL86551.1| hypothetical protein L917_14025 [Phytophthora parasitica] >gi|568089651|gb|ETN04493.1| hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >gi|570320511|gb|ETO68459.1| hypothetical protein F444_14714 [Phytophthora parasitica P1976] >gi|570944333|gb|ETP09590.1| hypothetical protein F441_14568 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 164.466 bits (415), Expect = 2.790e-45
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  598 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|301122163|ref|XP_002908808.1| (dynamin-2 [Phytophthora infestans T30-4] >gi|262099570|gb|EEY57622.1| dynamin-2 [Phytophthora infestans T30-4])

HSP 1 Score: 164.466 bits (415), Expect = 2.884e-45
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  597 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 704          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|570975750|gb|ETP37688.1| (hypothetical protein F442_14526 [Phytophthora parasitica P10297])

HSP 1 Score: 164.466 bits (415), Expect = 3.416e-45
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  598 MRQGDEPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|568042385|gb|ETM39716.1| (hypothetical protein L914_14151 [Phytophthora parasitica] >gi|970635216|gb|KUF80179.1| Dynamin-1 protein [Phytophthora nicotianae] >gi|970644146|gb|KUF85120.1| Dynamin-1 protein [Phytophthora nicotianae] >gi|970657489|gb|KUF95365.1| hypothetical protein AM588_10010004 [Phytophthora nicotianae])

HSP 1 Score: 164.466 bits (415), Expect = 3.451e-45
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  598 MRQGDEPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLNELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 705          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|1214691216|gb|OWZ06196.1| (Dynamin [Phytophthora megakarya])

HSP 1 Score: 162.925 bits (411), Expect = 1.142e-44
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+  RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  597 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVGHSKENIQNELVSSLYREDKLTELLAETGDIGARRSNCNEMRTLLQRALEIVNEVRDFNTFK 704          
BLAST of EWM23361.1 vs. NCBI_GenBank
Match: gi|953497746|emb|CEG40506.1| (dynamin like protein [Plasmopara halstedii])

HSP 1 Score: 162.54 bits (410), Expect = 1.356e-44
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MRYGDGPNDREKIETEIIKALTASYFDVVRKNFMDMVPKTIMYFLVNHAKDNLQNELVSNLYRDDLIGESMRETADVAMRRKNAQEMKLLLQKALEIVNEVRDFNTFK 108
            MR GD P DRE+IETEIIK+L ASYFD+VRKNF+D+VPK IM F+V H+K+N+QNELVS+LYR+D + E + ET D+A RR N  EM+ LLQ+ALEIVNEVRDFNTFK
Sbjct:  597 MRQGDDPTDRERIETEIIKSLLASYFDIVRKNFLDLVPKAIMCFMVVHSKENIQNELVSSLYREDKLTELLAETGDIAARRSNCDEMRTLLQRALEIVNEVRDFNTFK 704          
The following BLAST results are available for this feature:
BLAST of EWM23361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104369|gb|EWM23361.1|8.253e-74100.00dynamin switch motor protein [Nannochloropsis gadi... [more]
gi|695469612|ref|XP_009540182.1|2.003e-4769.44hypothetical protein PHYSODRAFT_566888 [Phytophtho... [more]
gi|698793350|ref|XP_009829707.1|8.444e-4668.52hypothetical protein H257_06247 [Aphanomyces astac... [more]
gi|695428195|ref|XP_009529892.1|2.022e-4569.44hypothetical protein PHYSODRAFT_560655 [Phytophtho... [more]
gi|675203071|ref|XP_008910420.1|2.790e-4569.44hypothetical protein PPTG_15137 [Phytophthora para... [more]
gi|301122163|ref|XP_002908808.1|2.884e-4569.44dynamin-2 [Phytophthora infestans T30-4] >gi|26209... [more]
gi|570975750|gb|ETP37688.1|3.416e-4569.44hypothetical protein F442_14526 [Phytophthora para... [more]
gi|568042385|gb|ETM39716.1|3.451e-4569.44hypothetical protein L914_14151 [Phytophthora para... [more]
gi|1214691216|gb|OWZ06196.1|1.142e-4468.52Dynamin [Phytophthora megakarya][more]
gi|953497746|emb|CEG40506.1|1.356e-4469.44dynamin like protein [Plasmopara halstedii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7330rna7330Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications