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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100510g3.4381.mrna |
| Orig protein id | gnl|cribi|Naga_100510g3.4381 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:281961..283390 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna733 ID=rna733|Name=rna733|organism=Nannochloropsis gaditana|type=mRNA|length=1533bp
GTGGTGCGGCAAATACTCTGTGTAATGAGCTTTCATGCTTTGGCTACAAT
GTGACTCGACGTGGTCATAAGTCGGGGTCTTCAACCCTAACACCTCCATC
CCTTGAATACAGGCCAGATCCATGCTGCCGTCCCTCAAGCTCTGCGGTCT
TTCGTCCTTTGTCTTGCTTATAATAAATAAACCGATAGCAGCCTTTCTGC
CACCAATACCTTTCTCTGCTACCGCGACATCCCCGACCTCGGCCCGTGTT
ACCTTGTCCTCCTCTTCTGCCTTACAAGATGATTCCTTCCCAGAGCAAGG
GGCTTTTCAGCACAACAAAGTTGAGCTACGAGTATATGACATTGGTGGTA
AATATACACCAATGATGTCTGCATTGCTCCGGAAGGAAATGCCGGCTATT
TGGCACGTGGGGATCGGTGTGTTTGGGAAAGAGTATTGGTTTTCTACCCG
CATAGAAAGTAAGGACTTGGGAGACACGGAGACGGCATTCGGGATGGCTC
CTCACGCCACGTACGAGCTGGGGCAGACGGCCGTGGAACGTAAGGCGTTT
GAAGCTTTTTTGGAGGAAGAACTGAGTTCTCGGTTCAATATTGACACCTA
CAAAGTTTTCACGCATAATTGTAACCATTTCAGCCGCGATGCCCTGGCTT
TCCTCCTTGGCGAAGGCGTGGAAATGCCCGGATACATATTGGAAAATTCT
GACCGGGCCTTGGATGCCCTTCCCAAGGGCCAGGCCCTGCTAACCAAGTC
GATCGCGAACCAGGTGGCGCGCGTGGTGATGTTGGCGTGGGGGACGGCAA
ATCGCAGCAAGGAAGACATCGCTCGCCGGGAGGCCCGACGAAAGAAGGCC
ATGGCGGAGAGAGACAGCGTGGAGGAGGCGGAGGAGGGGAGGCGGGGGGT
GGAAGAAGGGAGCCAGCCAGCGGCTTGAGGGGGGGGAGGGCGGGCTGAGA
AGGCATAGGGTATGAGTGTGCAAAGTCCAAGTCGACATCGATGTCCGCGC
TTACTGCGCACGGTGCAGCGACGTGCATGGTACTGCGGCATGTTTTGTTT
TAATTGGTCGGCAAGTTACTGTCTCAGGCGGTCCGATTGCTTCGTTCTCA
GAAGCACATTTCTCTCCTCCTCCCTTTCTTCTCCCACCCTCCGCCTGTAT
CCTCCTCTATTGTCCTCTACTCAAGACACCCAATCGCGTCACACGGCAGC
CTCATGCCCCGCTTTCCTCACGGAGAACCGCCTCCCTCCCTCCCCATCGT
TGAAGGGGAGACATGCGGGGCTCCGTCCAAAAGGCTCCGTGAGACCATCT
CCACAGCTTCTTTCCTCGCGACGGCGGCCCTGATGCTCCCCAGGTCCACA
ACGCCCATGACCTCTACCCCGCCCTTCCCCCCGCCTTCCCCCCCGACCAC
CCTCTCCCGCACCACTGGGACCACCCCCAGCCCGCGCGTGGTCAGCAAGT
CCCGTGCCCGGAAAGCTTCTTCCCCAAACCACAAAATTTCCGTCTCTTTG
ATAGCGGGAACCACGTCTCGGAGTCTCAATCCC back to topprotein sequence of rna733 >rna733-protein ID=rna733-protein|Name=rna733|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MTRQGWFVLGVAAHFTIVLQAFHVRLVPKHALPALARRSPVSSLIFGPPS
SHGLHHSRIRSSGFAMYNSPDDGTSSGQSVVVEEVEKGETDLELNDTAVL
TASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLF
FVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQG
GYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVI
VHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRT
EIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASF
GIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGRE
VSINPLEAPLFGRLLTALLWWVDIHYSKTRHSKQRISGIGRGHTRVGRAM
P back to topmRNA from alignment at CM002456.1:281961..283390+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna733 ID=rna733|Name=rna733|organism=Nannochloropsis gaditana|type=mRNA|length=1430bp|location=Sequence derived from alignment at CM002456.1:281961..283390+ (Nannochloropsis gaditana)
ATGACACGCCAAGGCTGGTTTGTTCTTGGCGTGGCTGCACACTTCACCAT
CGTCCTTCAAGCCTTTCACGTCCGACTTGTCCCAAAGCACGCCCTTCCGG
CATTAGCCAGGCGCTCCCCCGTTTCCAGCTTGATCTTCGGCCCCCCCTCC
AGTCATGGCCTGCACCACTCAAGAATAAGGAGCTCAGGGTTCGCAATGTA
CAACTCGCCCGACGATGGGACCAGCAGCGGGCaaagcgtggtggtggagg
aggttgagaagggggagacggatCTTGAATTGAACGATACCGCAGTGCTC
ACGGCTTCTGTCGGCAGCCCCGCCACGGAGACGGCCAATGCCATGTTCCA
ACTGTGGAAGCGTCGGTTGTGGACGAAAGCTGACTATTTGCACTCCCATG
CCGTATCGGGCGCGGCCTTCATGGTCCTAGGCGCCCTGTACGTTTTGTTT
TTCGTGGGCGACCAAGTCTTCGGGGGGAGCGCCCTAGCCCAGGCCGAGCG
CGGGGTGGTAGGATGGGTGCCCCTCGCCATCATGTGGACCGGCGTTGTGA
ATTGTATCAGCTGTCTGCCCATGTCCAAGTTCCGCGCGGGACCCCAGGGG
GGCTACGACACCAAGGGCGCCGGTTTCAAAGGGTTGGGAATAGGCATGAC
CATGCTTGGCATATGGACCGCCTACTTCTTCTCCGGGCATTACCCGAGCT
GGATGGCGCCGGTAGACCCGCTTTTGGCTCTGGGCTTTCTGGCGGTGATT
GTGCATGGCATTGTCAATTCTGAggtggccttggccaaggaaCTGGAAGA
GAAGGCTCCCGCCATGTCCCCTGAAGGCGTGTGGAGCTctaccccgtcct
cccctgcgtcctccccggaCGCCTCCCTGACAGAGCGGGAGACCCGTACC
GAAATCGTGCTGAACCACCGCGTCGCGTCGTACcctaacctcctccacct
cccagtCCTCTACAACGTCATCCTCGGAGGCCAGCCCTGGCTCCAGCAGG
TGGTCGCCAAATTCCCACTGGagcccaccctcctcttccacgcctCGTTC
GGGATCGCGGTGGCGAACAGCATCGTCTTTCTGGGGGCGACTTTGAAGGA
CCGTAAGCTCATGACGTTGCGGCAGTGGTTGTTGCTCCAAGTGGTGGTGA
TGACCCCCTTCGTCACGACCGTCGTGGACGTATGGAGCTTGGGAAGGGAA
GTGAGCATCAACCCCTTGGAGGTCTACGCGGGCTTGATGGGttgaggtgg
gggagggaaggggggtcgAATGACTGGTGCATGTACAGAGGCAAGGCGCC
GCTCTTCGGGAGGCTTTTAACCGCATTGCTTTGGTGGGTAGACATTCATT
ACAGTAAGACAAGGCACTCTAAGCAAAGAATATCGGGGATTGGTCGCGGA
CACACTCGTGTCGGCCGTGCTATGCCTTAG back to topCoding sequence (CDS) from alignment at CM002456.1:281961..283390+ >rna733 ID=rna733|Name=rna733|organism=Nannochloropsis gaditana|type=CDS|length=2712bp|location=Sequence derived from alignment at CM002456.1:281961..283390+ (Nannochloropsis gaditana)
ATGACACGCCAAGGCTGGTTTGTTCTTGGCGTGGCTGCACACTTCACCAT
CGTCCTTCAAGCCTTTCACGTCCGACTTGTCCCAAAGCACGCCCTTCCGG
CATTAGCCAGGCGCTCCCCCGTTTCCAGCTTGATCTTCGGCCCCCCCTCC
AGTCATGGCCTGCACCACTCAAGAATAAGGAGCTCAGGGTTCGCAATGTA
CAACTCGCCCGACGATGGGACCAGCAGCGGGCaaagcgtggtggtggagg
aggttgagaagggggagacggatCTTGAATTGAACGATACCGCAGTGCTC
ACGGCTTCTGTCGGCAGCCCCGCCACGGAGACGGCCAATGCCATGTTCCA
ACTGTGGAAGCGTCGGTTGTGGACGAAAGCTGACTATTTGCACTCCCATG
CCGTATCGGGCGCGGCCTTCATGGTCCTAGGCGCCCTGTACGTTTTGTTT
TTCGTGGGCGACCAAGTCTTCGGGGGGAGCGCCCTAGCCCAGGCCGAGCG
CGGGGTGGTAGGATGGGTGCCCCTCGCCATCATGTGGACCGGCGTTGTGA
ATTGTATCAGCTGTCTGCCCATGTCCAAGTTCCGCGCGGGACCCCAGGGG
GGCTACGACACCAAGGGCGCCGGTTTCAAAGGGTTGGGAATAGGCATGAC
CATGCTTGGCATATGGACCGCCTACTTCTTCTCCGGGCATTACCCGAGCT
GGATGGCGCCGGTAGACCCGCTTTTGGCTCTGGGCTTTCTGGCGGTGATT
GTGCATGGCATTGTCAATTCTGAggtggccttggccaaggaaCTGGAAGA
GAAGGCTCCCGCCATGTCCCCTGAAGGCGTGTGGAGCTctaccccgtcct
cccctgcgtcctccccggaCGCCTCCCTGACAGAGCGGGAGACCCGTACC
GAAATCGTGCTGAACCACCGCGTCGCGTCGTACcctaacctcctccacct
cccagtCCTCTACAACGTCATCCTCGGAGGCCAGCCCTGGCTCCAGCAGG
TGGTCGCCAAATTCCCACTGGagcccaccctcctcttccacgcctCGTTC
GGGATCGCGGTGGCGAACAGCATCGTCTTTCTGGGGGCGACTTTGAAGGA
CCGTAAGCTCATGACGTTGCGGCAGTGGTTGTTGCTCCAAGTGGTGGTGA
TGACCCCCTTCGTCACGACCGTCGTGGACGTATGGAGCTTGGGAAGGGAA
GTGAGCATCAACCCCTTGGAGGCGCCGCTCTTCGGGAGGCTTTTAACCGC
ATTGCTTTGGTGGGTAGACATTCATTACAGTAAGACAAGGCACTCTAAGC
AAAGAATATCGGGGATTGGTCGCGGACACACTCGTGTCGGCCGTGCTATG
CCTTAGATGACACGCCAAGGCTGGTTTGTTCTTGGCGTGGCTGCACACTT
CACCATCGTCCTTCAAGCCTTTCACGTCCGACTTGTCCCAAAGCACGCCC
TTCCGGCATTAGCCAGGCGCTCCCCCGTTTCCAGCTTGATCTTCGGCCCC
CCCTCCAGTCATGGCCTGCACCACTCAAGAATAAGGAGCTCAGGGTTCGC
AATGTACAACTCGCCCGACGATGGGACCAGCAGCGGGCaaagcgtggtgg
tggaggaggttgagaagggggagacggatCTTGAATTGAACGATACCGCA
GTGCTCACGGCTTCTGTCGGCAGCCCCGCCACGGAGACGGCCAATGCCAT
GTTCCAACTGTGGAAGCGTCGGTTGTGGACGAAAGCTGACTATTTGCACT
CCCATGCCGTATCGGGCGCGGCCTTCATGGTCCTAGGCGCCCTGTACGTT
TTGTTTTTCGTGGGCGACCAAGTCTTCGGGGGGAGCGCCCTAGCCCAGGC
CGAGCGCGGGGTGGTAGGATGGGTGCCCCTCGCCATCATGTGGACCGGCG
TTGTGAATTGTATCAGCTGTCTGCCCATGTCCAAGTTCCGCGCGGGACCC
CAGGGGGGCTACGACACCAAGGGCGCCGGTTTCAAAGGGTTGGGAATAGG
CATGACCATGCTTGGCATATGGACCGCCTACTTCTTCTCCGGGCATTACC
CGAGCTGGATGGCGCCGGTAGACCCGCTTTTGGCTCTGGGCTTTCTGGCG
GTGATTGTGCATGGCATTGTCAATTCTGAggtggccttggccaaggaaCT
GGAAGAGAAGGCTCCCGCCATGTCCCCTGAAGGCGTGTGGAGCTctaccc
cgtcctcccctgcgtcctccccggaCGCCTCCCTGACAGAGCGGGAGACC
CGTACCGAAATCGTGCTGAACCACCGCGTCGCGTCGTACcctaacctcct
ccacctcccagtCCTCTACAACGTCATCCTCGGAGGCCAGCCCTGGCTCC
AGCAGGTGGTCGCCAAATTCCCACTGGagcccaccctcctcttccacgcc
tCGTTCGGGATCGCGGTGGCGAACAGCATCGTCTTTCTGGGGGCGACTTT
GAAGGACCGTAAGCTCATGACGTTGCGGCAGTGGTTGTTGCTCCAAGTGG
TGGTGATGACCCCCTTCGTCACGACCGTCGTGGACGTATGGAGCTTGGGA
AGGGAAGTGAGCATCAACCCCTTGGAGGCGCCGCTCTTCGGGAGGCTTTT
AACCGCATTGCTTTGGTGGGTAGACATTCATTACAGTAAGACAAGGCACT
CTAAGCAAAGAATATCGGGGATTGGTCGCGGACACACTCGTGTCGGCCGT
GCTATGCCTTAG back to top
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