EWM29942.1, cds733 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|585112529|gb|EWM29942.1| (hypothetical protein Naga_100510g3 [Nannochloropsis gaditana]) HSP 1 Score: 915.22 bits (2364), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0 Query: 1 MTRQGWFVLGVAAHFTIVLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQSVVVEEVEKGETDLELNDTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLEAPLFGRLLTALLWWVDIHYSKTRHSKQRISGIGRGHTRVGRAMP 451 MTRQGWFVLGVAAHFTIVLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQSVVVEEVEKGETDLELNDTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLEAPLFGRLLTALLWWVDIHYSKTRHSKQRISGIGRGHTRVGRAMP Sbjct: 1 MTRQGWFVLGVAAHFTIVLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQSVVVEEVEKGETDLELNDTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLEAPLFGRLLTALLWWVDIHYSKTRHSKQRISGIGRGHTRVGRAMP 451
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|873228715|emb|CEM15061.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 262.692 bits (670), Expect = 1.089e-79 Identity = 149/339 (43.95%), Postives = 202/339 (59.59%), Query Frame = 0 Query: 84 EVEKGETDLELNDTAVLTASVGS-------PATETAN----AMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGW----VPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLE 407 EV + E D + A + A VG P A A ++ ++R+WT D+LH HAVSG FM LG L+ + + V G + ++ W + ++ ++NC +C+PMSKFR G+DTKG GFKGLG GMT+L W A + SG+YP + P +A FLA IVHGI SE AL + + W+ +S+ + SL+ E R +IVLNHRVASYPNLLHLP+L+N+ +GG+ WL V+ FP E LL+ A+FG+A+ANSIVFLGATLKDR+LMTLR+WL LQ+VV+ PFV+TVVD G +S+ P E Sbjct: 99 EVVEEERDEIMTGGADVDARVGGASDVRRIPRVNAAKVFTAAYWRECRKRMWTSMDWLHLHAVSGVLFMGLGTLWFGWELARPVLGVEGAFEMPSPLLPWRADSASMTLLMVAILNCFTCIPMSKFR----NGHDTKGDGFKGLGTGMTLLAAWEALWVSGYYPPVLEAATPAIATAFLATIVHGIWTSEKALEGAVHRL------DAKWARG----SSNRETSLSYDEMRNDIVLNHRVASYPNLLHLPILWNIGIGGRGWLDTVLQSFPGESALLYDAAFGMALANSIVFLGATLKDRRLMTLREWLALQLVVLAPFVSTVVDCCVYGDSISVKPWE 423
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|873234229|emb|CEM02202.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 219.164 bits (557), Expect = 3.666e-63 Identity = 127/293 (43.34%), Postives = 180/293 (61.43%), Query Frame = 0 Query: 120 KRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGW----VPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGRE-VSINPLE 407 KRRLWT+ D+LH HA+SG A++ LG L+ L+ + G L W + +A++ GV+NC+SC PMSK + K GF+GLG+GMT+LG+W A + SG YP + + FL +I+ GI +E AL +L + + + TP + A E R E ++ HR+ASYPNLLH P+L+N+++GG+ WL +V+ FP E LL+HA+FG+A+AN+IVFLGATL+ RKLMT RQW+ LQ+VV+ PF +TVVD G E VS+NPL+ Sbjct: 138 KRRLWTRMDWLHIHAISGVAYIGLGGLWFLWEMVGPSLGLQQLVPPPSPYDLWQADALSVALLLVGVLNCVSCAPMSKHMS------PAKSEGFEGLGVGMTLLGVWEALWVSGFYPPSLEWATDGIGAVFLFMILRGIYTAERALESDLAMISAKYALGRI--RTPGAFA----------EARLESMVIHRIASYPNLLHTPILWNMLVGGREWLDRVLDTFPAESILLYHAAFGMALANAIVFLGATLQHRKLMTSRQWIALQLVVLAPFWSTVVDCLVYGPETVSVNPLD 412
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|551542693|ref|XP_005759533.1| (hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516] >gi|485607660|gb|EOD07104.1| hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 147.517 bits (371), Expect = 5.554e-36 Identity = 111/346 (32.08%), Postives = 174/346 (50.29%), Query Frame = 0 Query: 76 SGQSVVVEEVEKGETDLELNDTAVLTASVGS-----PATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLF-FVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQ-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMT-PFVTTVVDVWSLGREVSINPLEA-PLFG 412 S VV E KG+ D D L A +GS T T +RRLWT+AD++H HAVSGA F+ LG ++++ V + + +A + G +++ G+VN +S +PMSKF + D K GF G G+T + ++ A++FSG YP ++ P D + L + V N EV L + + + E+E R + +L +R+AS+PNL L +Y++ GG WLQQ A++P++ T ++H A+ ++ TL+DRKL+TL Q LL+ +V T P V+ ++D + G V+I+P E LFG Sbjct: 119 DANSKVVMERLKGQED----DDGGLAALLGSFLVFLDPTGTV-------RRRLWTRADFMHIHAVSGAYFLFLGIPWLVYSHVTNALDTSVPMATS-----GPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQAN------------------ERRRVKVPEKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWALFG 429
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|551602929|ref|XP_005783002.1| (hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516] >gi|485635947|gb|EOD30573.1| hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.043 bits (349), Expect = 8.765e-33 Identity = 111/357 (31.09%), Postives = 174/357 (48.74%), Query Frame = 0 Query: 76 SGQSVVVEEVEKGETDLELNDTAVLTASVGS-----PATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLF-FVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQ-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQP-----------WLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMT-PFVTTVVDVWSLGREVSINPLEA-PLFG 412 S VV E KG+ D D L A +GS T T +RRLWT+AD++H HAVSGA F+ LG ++++ V + + +A + G +++ G+VN +S +PMSKF + D K GF G G+T + ++ A++FSG YP ++ P D + L + V N EV L + + + E+E R + +L +R+AS+PNL L +Y++ GG WLQQ A++P++ T ++H A+ ++ TL+DRKL+TL Q LL+ +V T P V+ ++D + G V+I+P E LFG Sbjct: 119 DANSKVVMERLKGQED----DDGGLAALLGSFLVFLDPTGTV-------RRRLWTRADFMHIHAVSGAYFLFLGIPWLVYSHVTNALDTSVPMATS-----GPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQAN------------------ERRRVKVPEKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAASLGQGPVLRAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWALFG 440
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|397625036|gb|EJK67640.1| (hypothetical protein THAOC_11301 [Thalassiosira oceanica]) HSP 1 Score: 140.198 bits (352), Expect = 2.551e-32 Identity = 87/290 (30.00%), Postives = 149/290 (51.38%), Query Frame = 0 Query: 120 KRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVV-VMTPFVTTVVDVWSLGREVSINPLE 407 +RRLWTKAD++H HA++G F+ LG ++L+ V G Q G G +++ TG+ N +S +PMS+F + + D K GF G G+T + +W A++FSG YP + P++ + A+ V N E L + E ++ T+ E + +L +R+AS+PNL L + ++ LGG+ W+ + +P++ ++H A+ ++ L TL+DRKL+ L+ L+L + + P V+ VVD + G ++INPL+ Sbjct: 357 RRRLWTKADFMHIHAITGTYFLALGMAWLLY---SHVVGFQNPEQM-MGTTGPFLASLLLTGLGNALSAIPMSRFSSDKMFDFEDLKANGFTIGGTGLTCMSLWVAWWFSGSYPDALEPLNTAFFFLWAAICVGSTANWEYMLQQNFE-------------NSTGKARRGKFGKQTQDEMNKKALL-YRIASWPNLTQLMFISSIPLGGREWVGSMTDTWPMQMIPMYHYGLVSAIGYALSMLAETLRDRKLIDLQTDLMLLIFGFLIPIVSVVVDSVTYGDAITINPLD 628
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|676389529|ref|XP_009038043.1| (hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens] >gi|323451549|gb|EGB07426.1| hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens]) HSP 1 Score: 137.117 bits (344), Expect = 4.213e-32 Identity = 96/291 (32.99%), Postives = 151/291 (51.89%), Query Frame = 0 Query: 120 KRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVIL-GGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVV-VMTPFVTTVVDVWSLGREVSINPLE 407 +RRLWTKAD++H+HA SGA F+V L++L+ G A A G + +++ GV N ++ +PM++F + D K GF G G+T++ IW A +FSG YP+ + P P L + +V +N E+ L + E A + E + + T E + +L +R+AS+PNL L LY++ L W VV ++P + L +H F AV ++ TL+DRKL++LR L++ VV V P V+ +D LG V++NPL+ Sbjct: 124 RRRLWTKADFMHAHAASGAYFLVGAPLWLLY--SHATAAGHLDAVATWRFDGPLETSLLVAGVANALTAIPMARFSSNKMFDVTDLKANGFTFGGAGLTLMSIWIAAWFSGGYPAALLPAGPAFFLLWASVCAGTTLNWEIMLQQNF-EAAEEANKEMATRGGRKTDLERKFKTATPEELNEKAIL-YRLASWPNLTQLLFLYSLCLPDAAMWWAGVVERYPNQGVLGYHYGFASAVGYALSMFSETLRDRKLVSLRVDLIILVVGVFLPMVSVGLDGVLLGDTVTVNPLD 410
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|676387381|ref|XP_009036969.1| (hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens] >gi|323452364|gb|EGB08238.1| hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens]) HSP 1 Score: 128.642 bits (322), Expect = 4.484e-29 Identity = 103/292 (35.27%), Postives = 145/292 (49.66%), Query Frame = 0 Query: 120 KRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPM-SKFRAGPQGGYDTKGA-GFKGLGIGMTMLGIWTAYFFSGHYPSWM-APVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWL-LLQVVVMTPFVTTVVDVWSLGREVSINPLE 407 KR+LWTK D+ HSHAVSGAAF+ LG ++ + G G G LAI+ GV N +S LPM S R D A F+ G + W ++FSG YP+++ VD L L +A I I SE ++A + A G +S LT E ++ R+ SYPNL LPVL NV+LGG+PWL +V+ +FP + LL H F A++ +I F TL+DR ++ + L +L PF+T VDV + ++NPL+ Sbjct: 174 KRKLWTKLDFAHSHAVSGAAFLALGVGWLGAVARGEAAGAVEAGARIHG--GPASLAILAVGVWNSVSALPMASDERVYVTRDLDRYHALAFRWGGSAQLVACAWLCWWFSGLYPAFVPGVVDGALCLAAMASIAWVIYFSEESIAVVDRKVAEGGFVHGKRAS-----------ELTAGE-HAQLSALARLGSYPNLFQLPVLANVLLGGRPWLDRVLDEFPHQSALLHHYLFACALSYAITFFATTLRDRNVIGITADLAMLATGTALPFLTMFVDVAAFPAATTLNPLD 451
BLAST of EWM29942.1 vs. NCBI_GenBank
Match: gi|298707645|emb|CBJ25962.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.561 bits (314), Expect = 5.130e-28 Identity = 92/342 (26.90%), Postives = 166/342 (48.54%), Query Frame = 0 Query: 68 NSPDDGTSSGQSVVVEEVEK-GETDLELNDTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDASLTERETRTEIVLNHRVASYPNLL-HLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLE 407 N+ + + +V EEV + GE + L T V A G+ T + +RR+ TK D++H HA SGA ++ G+LY+L +G ++F G+ + +PL ++ G +N S +PM+ R+ + G+ ++ + +W A++ SG YP+ +AP DP LA L+++V V +E + E ++ ++ +G + + E +R SY +L+ + P LY ++G W++++ FP P LLFHA +A + SI FL TL R+L+ + +Q + P V +++D +G + NP++ Sbjct: 126 NTAIENVDAVGAVAQEEVRQAGEEVVRLTATTVARALPGTWLTAGLPKWMHILRRRMITKEDWMHLHASSGALYIAGGSLYLLGVIGMELFTGT----PQLDTTSALPLCVLGFGALNTFSSIPMANTRS------------WVLSGLCLSTMQLWNAWYVSGAYPASLAPADPWLAAANLSLLVIACVEAEEQILAEKRQR-EILAQKGRRRTGKIH---------IRGDDHVEGDAMNRAGSYGSLIFNAPHLYATLVGSG-WVERLGEAFPDSPALLFHAYVALATSTSIAFLAPTLYQRRLIDAKMMSSMQFLTFAPAVMSLIDASVMGAAATNNPID 440 The following BLAST results are available for this feature:
BLAST of EWM29942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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