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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100057g23.3915.mrna |
| Orig protein id | gnl|cribi|Naga_100057g23.3915 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:339056..341435 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7328 ID=rna7328|Name=rna7328|organism=Nannochloropsis gaditana|type=mRNA|length=2091bp
GCGCCCGCGACGTCCTCTCGCTTGGGTGAAACAGGGAAGAAAATCGGAAT
CACGGCTCACACGGGTAAAATTCTCACATCTTACAGTGCAGGGAACAAAG
GGACCACTGCATATTTGTGGCATAGCTCCAGGTTGAAATAGATGTGGCCA
GGACAGGCACCACCACCCCCGCCTCCTCCTCCTCCTCCTCCTCCACCTCC
CCCCCTCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCCCCTC
CTCCCCCTTCGTCCTCCGCTTTCCCCCCCCCTCCTCCTCCTCCCCCTCCT
CCCCCTCCTCCGCCTCCTCCTCCCCGATCTGCGCCGCCACTGCCACCGCC
GCCGCAGCCGCCTGGAACGTCAGGTGCAAATACGTCGGCAGCACCCCAGG
ACGGCTCTTCCTTCTCGTCCTTCCATTCAGACGGCAAACCGGCTTCAGCC
AACGGGAGCACCCACGCCGGCCCGACCAAACACGCTCCTGGAAAACGACC
GCGGCCGGGCCAGCCTCCTCCTTCGCACCTGGCGGCCGCCACCACCGCCG
CCCACAAGAGTCAGGCCGGCACGCGCGGACGTGGCGGGGCCTCGGGTGGA
AGCACCAGCGCCCCTGTCCAGCTCTCTCGGTGGCGGGACGCGATTCGCAG
CGATTTCGTGGTGGACTTGAAGTTCCAGCTTCCCCTCCCGGAGGTGCCTC
TGGGGCCCCGCTTCCTGACCGTGGACAGTTTGGCGAACTTGGGGGACCTC
GTGAGGTACCGGGAGGTGGTGCCATTGGCTAGCAGATTCAAATATCCGTT
ACACTCAGACATCTCCCTGGGCGTGGAAATCGACACGATCGACCGGAAGA
AGTGGCAGGCCCCAGTCTCGAACGGGGCCTCCCTCCCTCCCTCCCTCCAC
CCGGACGATGCCGCCTTCCTCGAGTGGGAGCTGTTTCAGGGGAGGCAGAA
GAGGGAGGCGGAGGACGGGGAGGGAGGGCGGGAGGGGGGGGAGGACACGG
AGGGCGTGGCCACCGCGGCCGACGTGGCGGCTCCATGGATGCTGCGGCCC
AGGTACGAGACGGCGGTCACGTACGACAGTCAGCAAGGGAGGGAGGGAGG
GGGCGCACAGGGGAGGAAGGGGAGGGCGGAGGGGGAAGAGGGGGAAGAAG
ACGGGAGGGAGGTGCTGGACGAGACGCGGCAAGAAGGATGGGAGGCAGCC
ATTGCGCGGAGCTTCGAGGAGGCGCAGAGGGGGGAGGGTTTGGGGCCACG
GGAGGCCGGGGAGCGGAAGCCTGCCTGGGTGGCGGAGTTGGTGCCGGACG
CGGGCCAGTGGGCGAGCGAGTTGATGGTGGTGCAGTTCGGGAACGAGGTG
CGGGGGCGGGAGGAGGAAGCGGCGCAAGAAGCGCCTTTGTTCGCTGTGGA
GGGGGGAAGGGAGGGGGAGGGTTGGGGCTTGGGGAGGACGGTGAAAGCGG
GGTACTACAGGGGCCAGGGGCACGCCTCCGTGGGGGAAGCGAGGGAGGGG
GGGGGTTCATTTGCAAGCGTTTCGAGCCTGTCCGCTACTACCATCTAGAG
GTGGGGAGGGCGGATGGGAGGGGGGGGGTCGGGGGGCCCGAGGGGGCGCA
GGGGCGGGGAACGCTACCGCAGCAGCAAGTGTTGCTGCTTGTAGACCCGG
AGGCGGGGGGGGCGAGCCTGTGCCCGATCTCGGCGGTCTTGAAGGTGAAG
AAGATGGACCGGGCGGTCTCGGAAAAGCCGGCGCGGGGCGTGAGTCTGGT
GCACCGGCCCTTGAGCGAGGAGGAGGAGGAGGCGAGGAGGGGGAAGCTCC
GGAGGGTGGGGTGGGAGGGGGAGGAGGGTGCGGGCAGGGGTTAGAAGGAG
AAGAGCCTGCAGGGGCTCGGAAATGCGCGGCCAGGGGCCAGCTGAGGGGA
GGAAAGGAGAGGGAGCGAAGGTCGGGAGTTGGGACGGGGAAGGAAAGAAA
GAAGAGAGGGGCCAAGAGGCACGGAGCACGTGGTGGTGACTGGGACTGCT
TTCTTTTCCCTGCTTCGGAGAGTACGAATGGGTATTTATTCCGTTTATAC
AAATATATGAAATATATATAGCATTTCACAAGCTCCGGAGA back to topprotein sequence of rna7328 >rna7328-protein ID=rna7328-protein|Name=rna7328|organism=Nannochloropsis gaditana|type=polypeptide|length=469bp
MWPGQQAPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPP
PPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGK
PASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGG
ASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLAN
LGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLP
PSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPW
MLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEG
WEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQF
GNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGE
AREGGGSFASVSSLSATTI back to topmRNA from alignment at CM002471.1:339056..341435- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7328 ID=rna7328|Name=rna7328|organism=Nannochloropsis gaditana|type=mRNA|length=2380bp|location=Sequence derived from alignment at CM002471.1:339056..341435- (Nannochloropsis gaditana)
GCGCCCGCGACGTCCTCTCGCTTGGGTGAAACAGGGAAGAAAATCGGAAT
CACGGCTCACACGGGTAAAATTCTCACATCTTACAGTGCAGGGAACAAAG
GGACCACTGCATATTTGTGGCATAGCTCCAGGTTGAAATAGATGTGGCCA
GGACAGGTAAGGAGGAGAGTGCGCGTTTGTAGGTGTGTGGACAGGCAGAT
ATTTTATCACAGCGCCTCCGCAATACGTTCTCGTTATCTGAGACGCGTTC
ACATGGATTGAATCATCAATGCCAACAGAAGATTACTTTTTGGAGCGATC
GCTTCTTTGAATTCACTGTGGTAATTTAGGAAGATAACTGATGGTTTGTC
AGAAAGAGCTGGGTGTTGTCTATCGCATGTCAGCACTTTCAGGACGAGCC
ACCTCCGCTCTCACGGTGTACTGAATTCCCCCTTACAACCAGCAGGCACC
ACCACCCCCGCCTCCTCCTCCTCCTCCTCCTCCACCTCCCCCCCTCCCTC
CTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTTCG
TCCTCCGCTTTCCCCCCCCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTCC
GCCTCCTCCTCCCCGATCTGCGCCGCCACTGCCACCGCCGCCGCAGCCGC
CTGGAACGTCAGGTGCAAATACGTCGGCAGCACCCCAGGACGGCTCTTCC
TTCTCGTCCTTCCATTCAGACGGCAAACCGGCTTCAGCCAACGGGAGCAC
CCACGCCGGCCCGACCAAACACGCTCCTGGAAAACGACCGCGGCCGGGCC
AGCCTCCTCCTTCGCACCTGGCGGCCGCCACCACCGCCGCCCACAAGAGT
CAGGCCGGCACGCGCGGACGTGGCGGGGCCTCGGGTGGAAGCACCAGCGC
CCCTGTCCAGCTCTCTCGGTGGCGGGACGCGATTCGCAGCGATTTCGTGG
TGGACTTGAAGTTCCAGCTTCCCCTCCCGGAGGTGCCTCTGGGGCCCCGC
TTCCTGACCGTGGACAGTTTGGCGAACTTGGGGGACCTCGTGAGGTACCG
GGAGGTGGTGCCATTGGCTAGCAGATTCAAATATCCGTTACACTCAGACA
TCTCCCTGGGCGTGGAAATCGACACGATCGACCGGAAGAAGTGGCAGGCC
CCAGTCTCGAACGGGGCCTCCCTCCCTCCCTCCCTCCACCCGGACGATGC
CGCCTTCCTCGAGTGGGAGCTGTTTCAGGGGAGGCAGAAGAGGGAGGCGG
AGGACGGGGAGGGAGGGCGGGAGGGGGGGGAGGACACGGAGGGCGTGGCC
ACCGCGGCCGACGTGGCGGCTCCATGGATGCTGCGGCCCAGGTACGAGAC
GGCGGTCACGTACGACAGTCAGCAAGGGAGGGAGGGAGGGGGCGCACAGG
GGAGGAAGGGGAGGGCGGAGGGGGAAGAGGGGGAAGAAGACGGGAGGGAG
GTGCTGGACGAGACGCGGCAAGAAGGATGGGAGGCAGCCATTGCGCGGAG
CTTCGAGGAGGCGCAGAGGGGGGAGGGTTTGGGGCCACGGGAGGCCGGGG
AGCGGAAGCCTGCCTGGGTGGCGGAGTTGGTGCCGGACGCGGGCCAGTGG
GCGAGCGAGTTGATGGTGGTGCAGTTCGGGAACGAGGTGCGGGGGCGGGA
GGAGGAAGCGGCGCAAGAAGCGCCTTTGTTCGCTGTGGAGGGGGGAAGGG
AGGGGGAGGGTTGGGGCTTGGGGAGGACGGTGAAAGCGGGGTACTACAGG
GGCCAGGGGCACGCCTCCGTGGGGGAAGCGAGGGAGGGGGGGGGTTCATT
TGCAAGCGTTTCGAGCCTGTCCGCTACTACCATCTAGAGGTGGGGAGGGC
GGATGGGAGGGGGGGGGTCGGGGGGCCCGAGGGGGCGCAGGGGCGGGGAA
CGCTACCGCAGCAGCAAGTGTTGCTGCTTGTAGACCCGGAGGCGGGGGGG
GCGAGCCTGTGCCCGATCTCGGCGGTCTTGAAGGTGAAGAAGATGGACCG
GGCGGTCTCGGAAAAGCCGGCGCGGGGCGTGAGTCTGGTGCACCGGCCCT
TGAGCGAGGAGGAGGAGGAGGCGAGGAGGGGGAAGCTCCGGAGGGTGGGG
TGGGAGGGGGAGGAGGGTGCGGGCAGGGGTTAGAAGGAGAAGAGCCTGCA
GGGGCTCGGAAATGCGCGGCCAGGGGCCAGCTGAGGGGAGGAAAGGAGAG
GGAGCGAAGGTCGGGAGTTGGGACGGGGAAGGAAAGAAAGAAGAGAGGGG
CCAAGAGGCACGGAGCACGTGGTGGTGACTGGGACTGCTTTCTTTTCCCT
GCTTCGGAGAGTACGAATGGGTATTTATTCCGTTTATACAAATATATGAA
ATATATATAGCATTTCACAAGCTCCGGAGA back to topCoding sequence (CDS) from alignment at CM002471.1:339056..341435- >rna7328 ID=rna7328|Name=rna7328|organism=Nannochloropsis gaditana|type=CDS|length=2820bp|location=Sequence derived from alignment at CM002471.1:339056..341435- (Nannochloropsis gaditana)
CAGGCACCACCACCCCCGCCTCCTCCTCCTCCTCCTCCTCCACCTCCCCC
CCTCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTC
CCCCTTCGTCCTCCGCTTTCCCCCCCCCTCCTCCTCCTCCCCCTCCTCCC
CCTCCTCCGCCTCCTCCTCCCCGATCTGCGCCGCCACTGCCACCGCCGCC
GCAGCCGCCTGGAACGTCAGGTGCAAATACGTCGGCAGCACCCCAGGACG
GCTCTTCCTTCTCGTCCTTCCATTCAGACGGCAAACCGGCTTCAGCCAAC
GGGAGCACCCACGCCGGCCCGACCAAACACGCTCCTGGAAAACGACCGCG
GCCGGGCCAGCCTCCTCCTTCGCACCTGGCGGCCGCCACCACCGCCGCCC
ACAAGAGTCAGGCCGGCACGCGCGGACGTGGCGGGGCCTCGGGTGGAAGC
ACCAGCGCCCCTGTCCAGCTCTCTCGGTGGCGGGACGCGATTCGCAGCGA
TTTCGTGGTGGACTTGAAGTTCCAGCTTCCCCTCCCGGAGGTGCCTCTGG
GGCCCCGCTTCCTGACCGTGGACAGTTTGGCGAACTTGGGGGACCTCGTG
AGGTACCGGGAGGTGGTGCCATTGGCTAGCAGATTCAAATATCCGTTACA
CTCAGACATCTCCCTGGGCGTGGAAATCGACACGATCGACCGGAAGAAGT
GGCAGGCCCCAGTCTCGAACGGGGCCTCCCTCCCTCCCTCCCTCCACCCG
GACGATGCCGCCTTCCTCGAGTGGGAGCTGTTTCAGGGGAGGCAGAAGAG
GGAGGCGGAGGACGGGGAGGGAGGGCGGGAGGGGGGGGAGGACACGGAGG
GCGTGGCCACCGCGGCCGACGTGGCGGCTCCATGGATGCTGCGGCCCAGG
TACGAGACGGCGGTCACGTACGACAGTCAGCAAGGGAGGGAGGGAGGGGG
CGCACAGGGGAGGAAGGGGAGGGCGGAGGGGGAAGAGGGGGAAGAAGACG
GGAGGGAGGTGCTGGACGAGACGCGGCAAGAAGGATGGGAGGCAGCCATT
GCGCGGAGCTTCGAGGAGGCGCAGAGGGGGGAGGGTTTGGGGCCACGGGA
GGCCGGGGAGCGGAAGCCTGCCTGGGTGGCGGAGTTGGTGCCGGACGCGG
GCCAGTGGGCGAGCGAGTTGATGGTGGTGCAGTTCGGGAACGAGGTGCGG
GGGCGGGAGGAGGAAGCGGCGCAAGAAGCGCCTTTGTTCGCTGTGGAGGG
GGGAAGGGAGGGGGAGGGTTGGGGCTTGGGGAGGACGGTGAAAGCGGGGT
ACTACAGGGGCCAGGGGCACGCCTCCGTGGGGGAAGCGAGGGAGGGGGGG
GGTTCATTTGCAAGCGTTTCGAGCCTGTCCGCTACTACCATCTAGATGTG
GCCAGGACAGCAGGCACCACCACCCCCGCCTCCTCCTCCTCCTCCTCCTC
CACCTCCCCCCCTCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCT
CCCCCTCCTCCCCCTTCGTCCTCCGCTTTCCCCCCCCCTCCTCCTCCTCC
CCCTCCTCCCCCTCCTCCGCCTCCTCCTCCCCGATCTGCGCCGCCACTGC
CACCGCCGCCGCAGCCGCCTGGAACGTCAGGTGCAAATACGTCGGCAGCA
CCCCAGGACGGCTCTTCCTTCTCGTCCTTCCATTCAGACGGCAAACCGGC
TTCAGCCAACGGGAGCACCCACGCCGGCCCGACCAAACACGCTCCTGGAA
AACGACCGCGGCCGGGCCAGCCTCCTCCTTCGCACCTGGCGGCCGCCACC
ACCGCCGCCCACAAGAGTCAGGCCGGCACGCGCGGACGTGGCGGGGCCTC
GGGTGGAAGCACCAGCGCCCCTGTCCAGCTCTCTCGGTGGCGGGACGCGA
TTCGCAGCGATTTCGTGGTGGACTTGAAGTTCCAGCTTCCCCTCCCGGAG
GTGCCTCTGGGGCCCCGCTTCCTGACCGTGGACAGTTTGGCGAACTTGGG
GGACCTCGTGAGGTACCGGGAGGTGGTGCCATTGGCTAGCAGATTCAAAT
ATCCGTTACACTCAGACATCTCCCTGGGCGTGGAAATCGACACGATCGAC
CGGAAGAAGTGGCAGGCCCCAGTCTCGAACGGGGCCTCCCTCCCTCCCTC
CCTCCACCCGGACGATGCCGCCTTCCTCGAGTGGGAGCTGTTTCAGGGGA
GGCAGAAGAGGGAGGCGGAGGACGGGGAGGGAGGGCGGGAGGGGGGGGAG
GACACGGAGGGCGTGGCCACCGCGGCCGACGTGGCGGCTCCATGGATGCT
GCGGCCCAGGTACGAGACGGCGGTCACGTACGACAGTCAGCAAGGGAGGG
AGGGAGGGGGCGCACAGGGGAGGAAGGGGAGGGCGGAGGGGGAAGAGGGG
GAAGAAGACGGGAGGGAGGTGCTGGACGAGACGCGGCAAGAAGGATGGGA
GGCAGCCATTGCGCGGAGCTTCGAGGAGGCGCAGAGGGGGGAGGGTTTGG
GGCCACGGGAGGCCGGGGAGCGGAAGCCTGCCTGGGTGGCGGAGTTGGTG
CCGGACGCGGGCCAGTGGGCGAGCGAGTTGATGGTGGTGCAGTTCGGGAA
CGAGGTGCGGGGGCGGGAGGAGGAAGCGGCGCAAGAAGCGCCTTTGTTCG
CTGTGGAGGGGGGAAGGGAGGGGGAGGGTTGGGGCTTGGGGAGGACGGTG
AAAGCGGGGTACTACAGGGGCCAGGGGCACGCCTCCGTGGGGGAAGCGAG
GGAGGGGGGGGGTTCATTTGCAAGCGTTTCGAGCCTGTCCGCTACTACCA
TCTAGATGTGGCCAGGACAG back to top
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