EWM23356.1, cds7311 (CDS) Nannochloropsis gaditana

Overview
NameEWM23356.1
Unique Namecds7311
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:341280..341294 -
Alignment locationCM002471.1:339599..340993 -

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Properties
Property NameValue
Protein idEWM23356.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100057g23.3915.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:341280..341294 -
CM002471.1supercontigCM002471.1:339599..340993 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0016043cellular component organization
Homology
[Close]
BLAST of EWM23356.1 vs. NCBI_GenBank
Match: gi|585104364|gb|EWM23356.1| (hypothetical protein Naga_100057g23 [Nannochloropsis gaditana])

HSP 1 Score: 900.582 bits (2326), Expect = 0.000e+0
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0 
Query:    1 MWPGQQAPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI 469
            MWPGQQAPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI
Sbjct:    1 MWPGQQAPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI 469
[Close]
BLAST of EWM23356.1 vs. NCBI_GenBank
Match: gi|585104365|gb|EWM23357.1| (hypothetical protein Naga_100057g23 [Nannochloropsis gaditana])

HSP 1 Score: 893.649 bits (2308), Expect = 0.000e+0
Identity = 468/469 (99.79%), Postives = 468/469 (99.79%), Query Frame = 0 
Query:    1 MWPGQQAPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI 469
            MWPGQ APPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI
Sbjct:    1 MWPGQ-APPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPSSSAFPPPPPPPPPPPPPPPPPRSAPPLPPPPQPPGTSGANTSAAPQDGSSFSSFHSDGKPASANGSTHAGPTKHAPGKRPRPGQPPPSHLAAATTAAHKSQAGTRGRGGASGGSTSAPVQLSRWRDAIRSDFVVDLKFQLPLPEVPLGPRFLTVDSLANLGDLVRYREVVPLASRFKYPLHSDISLGVEIDTIDRKKWQAPVSNGASLPPSLHPDDAAFLEWELFQGRQKREAEDGEGGREGGEDTEGVATAADVAAPWMLRPRYETAVTYDSQQGREGGGAQGRKGRAEGEEGEEDGREVLDETRQEGWEAAIARSFEEAQRGEGLGPREAGERKPAWVAELVPDAGQWASELMVVQFGNEVRGREEEAAQEAPLFAVEGGREGEGWGLGRTVKAGYYRGQGHASVGEAREGGGSFASVSSLSATTI 468
The following BLAST results are available for this feature:
BLAST of EWM23356.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104364|gb|EWM23356.1|0.000e+0100.00hypothetical protein Naga_100057g23 [Nannochlorops... [more]
gi|585104365|gb|EWM23357.1|0.000e+099.79hypothetical protein Naga_100057g23 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7328rna7328Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications