|
|
Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF862, eukaryotic |
| Orig transcript id | gnl|cribi|Naga_100510g2.4378.mrna |
| Orig protein id | gnl|cribi|Naga_100510g2.4378 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:280038..281570 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna732 ID=rna732|Name=rna732|organism=Nannochloropsis gaditana|type=mRNA|length=1328bp
ATGGGCTCCCTTCTGGTTGAGCTGGTGGAGCGGAAGCGCAAGGTGGACGA
GGTGTCGGCACGGAAAGGAGGGAGGGAGGAAGGCGGGGAGGGAGGGAGGG
AGGGGGGGTGGGGGGACCGGGAGCGGGGAAGGGAGTGGCAGGGCAGCCTG
CCGGGGGAAGGAGGGTGGGAGGGAGGGCAAGGCTTGGAGGAAGGAGTCGT
TTTGGCCGGCGTGGCCATGGCGGGGGGAGGGAGAGCGGAGCAATACATAT
ACACATTGGAGACCCAAGATGTCTTGGCAGCTCCCCCGATAATATTGGGG
CCCGAAACCGGATTGGAGGACACCGTTTTACGGCTGTGCGCCGCCAAGGC
CGAGGTGGTGGTGGTGATGGAGGGCGGGAAAAAGGGGGGGGATGAAGGAA
GCCTGGTGGGGCTGGCGGTGTTGAGAGACCTGGTGAGTGCCTTAGAGCTG
TGGTGCGACGACCGACGGGCAGAAGCCTCCGCCCCCGCCCCCGGCTCCCT
ACCTCCGGGTCGGTTTCCACCTCTGTCTGAGCAGGGTGAGTTCCCCGGCA
AGACGACGGGCAGGAGCGGTTTGCCTTCGTGGAGTGTGGACAAAGAGATG
CCTGCGCCCGACAAGGAAGGAAAAACCGACCCGGAGGTAGCAACCACCAG
CTTGACACAGGCCGTGGGCATGGGCAGCGTCGTCCAACGCGCCCTTGCCT
TGGCGGCGGTAATCCGGGAGATGGAGTGGTCGACGGGATTGAGACTCCGA
GACGTGGTTCCCGCTATCAAAGAGACGGAAATTTTGTGGTTTGGGGAAGA
AGCTTTCCGGGCACGGGACTTGCTGACCACGCGCGGGCTGGGGGTGGTCC
CAGTGGTGCGGGAGAGGGTGGTCGGGGGGGAAGGCGGGGGGAAGGGCGGG
GTAGAGGTCATGGGCGTTGTGGACCTGGGGAGCATCAGGGCCGCCGTCGC
GAGGAAAGAAGCTGTGGAGATGGTCTCACGGAGCCTTTTGGACGGAGCCC
CGCATGTCTCCCCTTCAACGATGGGGAGGGAGGGAGGCGGTTCTCCGTGA
GGAAAGCGGGGCATGAGGCTGCCGTGTGACGCGATTGGGTGTCTTGAGTA
GAGGACAATAGAGGAGGATACAGGCGGAGGGTGGGAGAAGAAAGGGAGGA
GGAGAGAAATGTGCTTCTGAGAACGAAGCAATCGGACCGCCTGAGACAGT
AACTTGCCGACCAATTAAAACAAAACATGCCGCAGTACCATGCACGTCGC
TGCACCGTGCGCAGTAAGCGCGGACATCGATGTCGACTTGGACTTTGCAC
ACTCATACCCTATGCCTTCTCAGCCCGC back to topprotein sequence of rna732 >rna732-protein ID=rna732-protein|Name=rna732|organism=Nannochloropsis gaditana|type=polypeptide|length=268bp
MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSA
LQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGV
FGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEE
LSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDAL
PKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSV
EEAEEGRRGVEEGSQPAA back to topmRNA from alignment at CM002456.1:280038..281570- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna732 ID=rna732|Name=rna732|organism=Nannochloropsis gaditana|type=mRNA|length=1533bp|location=Sequence derived from alignment at CM002456.1:280038..281570- (Nannochloropsis gaditana)
GTGGTGCGGCAAATACTCTGTGTAATGAGCTTTCATGCTTTGGCTACAAT
GTGACTCGACGTGGTCATAAGTCGGGGTCTTCAACCCTAACACCTCCATC
CCTTGAATACAGGCCAGATCCATGCTGCCGTCCCTCAAGCTCTGCGGTCT
TTCGTCCTTTGTCTTGCTTATAATAAATAAACCGATAGCAGCCTTTCTGC
CACCAATACCTTTCTCTGCTACCGCGACATCCCCGACCTCGGCCCGTGTT
ACCTTGTCCTCCTCTTCTGCCTTACAAGATGATTCCTTCCCAGAGCAAGG
GGCTTTTCAGCACAACAAAGTTGAGCTACGAGTATATGACATTGGTGGTA
AATATACACCAATGATGTCTGCATTGCTCCGGAAGGAAATGCCGGCTATT
TGGCACGTGGGGATCGGTGTGTTTGGGAAAGAGTATTGGTTTTCTACCCG
CATAGAAAGTAAGGACTTGGGAGACACGGAGACGGCATTCGGGATGGCTC
CTCACGCCACGTACGAGCTGGGGCAGACGGCCGTGGAACGTAAGGCGTTT
GAAGCTTTTTTGGAGGAAGAACTGAGTTCTCGGTTCAATATTGACACCTA
CAAAGTTTTCACGCATAATTGTAACCATTTCAGCCGCGATGCCCTGGCTT
TCCTCCTTGGCGAAGGCGTGGAAATGCCCGGATACATATTGGAAAATTCT
GACCGGGCCTTGGATGCCCTTCCCAAGGGCCAGGCCCTGCTAACCAAGTC
GATCGCGAACCAGGTGGCGCGCGTGGTGATGTTGGCGTGGGGGACGGCAA
ATCGCAGCAAGGAAGACATCGCTCGCCGGGAGGCCCGACGAAAGAAGGCC
ATGGCGGAGAGAGACAGCGTGGAGGAGGCGGAGGAGGGGAGGCGGGGGGT
GGAAGAAGGGAGCCAGCCAGCGGCTTGAGGGGGGGGAGGGCGGGCTGAGA
AGGCATAGGGTATGAGTGTGCAAAGTCCAAGTCGACATCGATGTCCGCGC
TTACTGCGCACGGTGCAGCGACGTGCATGGTACTGCGGCATGTTTTGTTT
TAATTGGTCGGCAAGTTACTGTCTCAGGCGGTCCGATTGCTTCGTTCTCA
GAAGCACATTTCTCTCCTCCTCCCTTTCTTCTCCCACCCTCCGCCTGTAT
CCTCCTCTATTGTCCTCTACTCAAGACACCCAATCGCGTCACACGGCAGC
CTCATGCCCCGCTTTCCTCACGGAGAACCGCCTCCCTCCCTCCCCATCGT
TGAAGGGGAGACATGCGGGGCTCCGTCCAAAAGGCTCCGTGAGACCATCT
CCACAGCTTCTTTCCTCGCGACGGCGGCCCTGATGCTCCCCAGGTCCACA
ACGCCCATGACCTCTACCCCGCCCTTCCCCCCGCCTTCCCCCCCGACCAC
CCTCTCCCGCACCACTGGGACCACCCCCAGCCCGCGCGTGGTCAGCAAGT
CCCGTGCCCGGAAAGCTTCTTCCCCAAACCACAAAATTTCCGTCTCTTTG
ATAGCGGGAACCACGTCTCGGAGTCTCAATCCC back to topCoding sequence (CDS) from alignment at CM002456.1:280038..281570- >rna732 ID=rna732|Name=rna732|organism=Nannochloropsis gaditana|type=CDS|length=807bp|location=Sequence derived from alignment at CM002456.1:280038..281570- (Nannochloropsis gaditana)
ATGCTGCCGTCCCTCAAGCTCTGCGGTCTTTCGTCCTTTGTCTTGCTTAT
AATAAATAAACCGATAGCAGCCTTTCTGCCACCAATACCTTTCTCTGCTA
CCGCGACATCCCCGACCTCGGCCCGTGTTACCTTGTCCTCCTCTTCTGCC
TTACAAGATGATTCCTTCCCAGAGCAAGGGGCTTTTCAGCACAACAAAGT
TGAGCTACGAGTATATGACATTGGTGGTAAATATACACCAATGATGTCTG
CATTGCTCCGGAAGGAAATGCCGGCTATTTGGCACGTGGGGATCGGTGTG
TTTGGGAAAGAGTATTGGTTTTCTACCCGCATAGAAAGTAAGGACTTGGG
AGACACGGAGACGGCATTCGGGATGGCTCCTCACGCCACGTACGAGCTGG
GGCAGACGGCCGTGGAACGTAAGGCGTTTGAAGCTTTTTTGGAGGAAGAA
CTGAGTTCTCGGTTCAATATTGACACCTACAAAGTTTTCACGCATAATTG
TAACCATTTCAGCCGCGATGCCCTGGCTTTCCTCCTTGGCGAAGGCGTGG
AAATGCCCGGATACATATTGGAAAATTCTGACCGGGCCTTGGATGCCCTT
CCCAAGGGCCAGGCCCTGCTAACCAAGTCGATCGCGAACCAGGTGGCGCG
CGTGGTGATGTTGGCGTGGGGGACGGCAAATCGCAGCAAGGAAGACATCG
CTCGCCGGGAGGCCCGACGAAAGAAGGCCATGGCGGAGAGAGACAGCGTG
GAGGAGGCGGAGGAGGGGAGGCGGGGGGTGGAAGAAGGGAGCCAGCCAGC
GGCTTGA back to top
|