EWM29939.1, cds732 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|585112526|gb|EWM29939.1| (protein of unknown function DUF862, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query: 1 MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPAA 268
MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPAA
Sbjct: 1 MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPAA 268
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|553190298|ref|XP_005855163.1| (hypothetical protein NGA_2079000, partial [Nannochloropsis gaditana CCMP526] >gi|422293897|gb|EKU21197.1| hypothetical protein NGA_2079000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEA 253
MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEA
Sbjct: 5 MLPSLKLCGLSSFVLLIINKPIAAFLPPIPFSATATSPTSARVTLSSSSALQDDSFPEQGAFQHNKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEA 257
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|873236566|emb|CEL99225.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 164.466 bits (415), Expect = 3.125e-47 Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 0
Query: 85 LLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVE---MPGYILENSDRALDALPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAER 247
L+RK + IWH G+ V+G+EYWFST IESKD+ TE+AFGMAP +++G T ++++ FE +LE EL+ RF++D Y+ FT+NCNH +AL FL E +P YILE S+ LD + QA LT+ IA +V+R++M+ W +NR+KE+ R A + R
Sbjct: 2 LVRKNIETIWHAGLVVYGREYWFSTHIESKDIQHTESAFGMAPTHVHDMGATTIDQRVFEDYLERELAPRFSLDRYETFTNNCNHMIDEALTFLTAPSAEPQRLPYYILEQSETILDNVSDLQADLTRKIATRVSRLIMVGWAKSNRAKEERERGWASESRNFGRR 167
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|551624281|ref|XP_005792379.1| (hypothetical protein EMIHUDRAFT_417423 [Emiliania huxleyi CCMP1516] >gi|485646520|gb|EOD39950.1| hypothetical protein EMIHUDRAFT_417423 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.612 bits (270), Expect = 2.930e-23 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 0
Query: 67 VELRVYDI-GGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQAL 206
V L VYD+ GG M ALL ++ I H G+GVFG+EY+FS ++ + LG G+ H T ELG+T++ R+ F+ + +E ++RF+ D Y + +NCNHFS + FLLG G+ P +IL+ RA+ A P GQ L
Sbjct: 259 VVLYVYDLSGGAARGMAQALLGIDVEIIPHTGVGVFGREYYFSGGVQREPLGAFTAHSGLPVHQTLELGRTSLPREVFDEYCDEVGAARFSADAYSLLENNCNHFSNECAQFLLGVGI--PQHILD-LPRAVLASPMGQML 396
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|195634915|gb|ACG36926.1| (thioredoxin [Zea mays]) HSP 1 Score: 101.293 bits (251), Expect = 6.168e-22 Identity = 68/210 (32.38%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 66 KVELRVYDI-GGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDA------LPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPAA 268
KV L VYD+ G + ++ L K + AIWH G+ V+G EY+F I+S G T +G P ELG T + R+ FE +L + ++ R+ +TY++ THNCN+FS + FL+G G +P YIL + + +P Q L + +N + A+ S A R+ A AE+ S E ++ E PAA
Sbjct: 7 KVTLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYYFGGGIQSSPAGTT--PYGR-PLRVVELGVTHIPREVFEDYLRD-IAPRYTAETYRLLTHNCNNFSHEVAQFLVGTGAGVPDYILNLPAEVMSSPMGPLIMPMIQNLESTLRSNVAPQTTQFVPTPASVSAPTEAPASERKAPAPAEKASKEAPAPAKK---EAPTPAA 209
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|1214357736|ref|NP_001149830.2| (uncharacterized protein LOC100283457 [Zea mays] >gi|1142712142|gb|AQK76066.1| Thioredoxin [Zea mays]) HSP 1 Score: 101.293 bits (251), Expect = 6.617e-22 Identity = 69/210 (32.86%), Postives = 104/210 (49.52%), Query Frame = 0
Query: 66 KVELRVYDI-GGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDA------LPKGQALLTKSIANQVARVVMLAWGTANRSKEDIARREARRKKAMAERDSVEEAEEGRRGVEEGSQPAA 268
KV L VYD+ G + ++ L K + AIWH G+ V+G EY+F I+S G T +G P ELG T + R+ FE +L + ++ R+ +TY++ THNCN+FS + FL+G G +P YIL + + +P Q L + +N + A+ S A R+ A AE+ S +EA +E PAA
Sbjct: 7 KVTLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYYFGGGIQSSPAGTTP--YGR-PLRVVELGVTHIPREVFEDYLRD-IAPRYTAETYRLLTHNCNNFSHEVAQFLVGTGAGVPDYILNLPAEVMSSPMGPLIMPMIQNLESTLRSNVAPQTTQFVPTPASVSAPTEAPASERKAPAPAEKAS-KEAPTPAPAKKEAPTPAA 211
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|1179558322|ref|XP_020699113.1| (desumoylating isopeptidase 1 [Dendrobium catenatum]) HSP 1 Score: 101.293 bits (251), Expect = 8.153e-22 Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 0
Query: 66 KVELRVYDIGGKYTPMMS-ALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILE------NSDRALDALPKGQALLT 208
KV+L +YD+ +S A L K + AIWH GI V+G EY+F I+ +G T +G+ P + ELG T V ++ FE +L+E +SSR+ +TY++ +HNCN+FS + FL+G + P YIL+ NS A LP Q L T
Sbjct: 7 KVKLNIYDLSQGLARQLSVAFLGKSIEAIWHTGIVVYGNEYYFGAGIQHDPVG--RTPYGV-PLRSVELGVTHVPKEIFEDYLKE-ISSRYTAETYRLLSHNCNNFSNEVAQFLVGTSI--PDYILQLPNDVMNSPMAPLILPMIQQLET 150
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|685267526|ref|XP_009124525.1| (PREDICTED: desumoylating isopeptidase 1-like [Brassica rapa]) HSP 1 Score: 100.138 bits (248), Expect = 1.015e-21 Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 0
Query: 65 NKVELRVYDIGGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDALPKGQALLTKSIAN 213
+KV L VYD+ + + ++LL K + +WH GI V+G EY+F I+ G T +G AP T E+G+T V + FE +LEE +S R+ ++Y + THNCN+FS + FL+G+G+ P YIL+ +++ P G LL I N
Sbjct: 6 HKVTLNVYDL----SQLSASLLGKVIEGVWHTGIVVYGNEYFFGGGIQHLPAGTT--PYG-APLRTVEMGETHVPKDVFEMYLEE-ISPRYTAESYNLITHNCNNFSNEVSQFLVGKGI--PDYILQLPSEVMNS-PMG-GLLMPMIQN 142
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|923806596|ref|XP_013689312.1| (PREDICTED: desumoylating isopeptidase 1-like [Brassica napus]) HSP 1 Score: 97.0561 bits (240), Expect = 2.095e-21 Identity = 53/136 (38.97%), Postives = 78/136 (57.35%), Query Frame = 0
Query: 65 NKVELRVYDIGGKYTPMMSA-LLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYILENSDRALDA 199
+KV L VYD+ +SA L K + +WH GI V+G EY+F I+ G T AP T ELG+T V + FE +LEE +S R+ ++Y + HNCN+FS + FL+G+G+ P YILE + +++
Sbjct: 6 HKVTLNVYDLSRGLARQLSASFLGKVIEGVWHTGIVVYGNEYFFGGGIQHLPAGTTPYG---APLRTVELGETHVPKDVFEMYLEE-ISPRYTAESYNLLAHNCNNFSNEVAQFLVGKGI--PNYILELPNEVMNS 135
BLAST of EWM29939.1 vs. NCBI_GenBank
Match: gi|242066952|ref|XP_002454765.1| (desumoylating isopeptidase 1 [Sorghum bicolor] >gi|241934596|gb|EES07741.1| hypothetical protein SORBI_3004G341800 [Sorghum bicolor]) HSP 1 Score: 99.7525 bits (247), Expect = 2.543e-21 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
Query: 66 KVELRVYDI-GGKYTPMMSALLRKEMPAIWHVGIGVFGKEYWFSTRIESKDLGDTETAFGMAPHATYELGQTAVERKAFEAFLEEELSSRFNIDTYKVFTHNCNHFSRDALAFLLGEGVEMPGYIL 190
KV L VYD+ G + ++ L K + AIWH G+ V+G EY+F I+S G T +G P T ELG T + R+ FE +L + ++ R+ +TY++ THNCN+FS + FL+G G +P YIL
Sbjct: 7 KVTLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYYFGGGIQSSPAGTT--PYGR-PLRTVELGVTHIPREVFEDYLRD-IAPRYTAETYRLLTHNCNNFSHEVAQFLVGTGAGVPDYIL 128 The following BLAST results are available for this feature:
BLAST of EWM29939.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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